Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 MIR515-1-201ENST00000384884 83 ntBASIC1.16□□□□□ -2.22
RFC4P35249 RNU11-5P-201ENST00000391216 129 ntBASIC1.16□□□□□ -2.22
RFC4P35249 RNA5SP118-201ENST00000410385 109 ntBASIC1.16□□□□□ -2.22
RFC4P35249 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.16□□□□□ -2.22
RFC4P35249 MTND3P23-201ENST00000431980 347 ntBASIC1.16□□□□□ -2.22
RFC4P35249 RPS26P45-201ENST00000471748 340 ntBASIC1.16□□□□□ -2.22
RFC4P35249 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.16□□□□□ -2.22
RFC4P35249 AC091144.1-201ENST00000519573 138 ntBASIC1.16□□□□□ -2.22
RFC4P35249 AC134698.4-201ENST00000523451 826 ntBASIC1.16□□□□□ -2.22
RFC4P35249 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.16□□□□□ -2.22
RFC4P35249 AC022217.4-201ENST00000604389 163 ntBASIC1.16□□□□□ -2.22
RFC4P35249 ZNF299P-201ENST00000406845 1804 ntBASIC1.16□□□□□ -2.22
RFC4P35249 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RFC4P35249 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RFC4P35249 Y_RNA.86-201ENST00000363020 111 ntBASIC1.15□□□□□ -2.23
RFC4P35249 RNU6-137P-201ENST00000363680 108 ntBASIC1.15□□□□□ -2.23
RFC4P35249 RNU6-596P-201ENST00000365395 98 ntBASIC1.15□□□□□ -2.23
RFC4P35249 AL356776.1-201ENST00000406574 447 ntBASIC1.15□□□□□ -2.23
RFC4P35249 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.23
RFC4P35249 AC005534.2-201ENST00000431047 433 ntBASIC1.15□□□□□ -2.23
RFC4P35249 SNORA31.10-201ENST00000516482 106 ntBASIC1.15□□□□□ -2.23
RFC4P35249 RNU6-107P-201ENST00000516643 102 ntBASIC1.15□□□□□ -2.23
RFC4P35249 SUMO2P16-201ENST00000519475 264 ntBASIC1.15□□□□□ -2.23
RFC4P35249 AC024995.1-201ENST00000523014 93 ntBASIC1.15□□□□□ -2.23
RFC4P35249 AL365434.2-201ENST00000607979 234 ntBASIC1.15□□□□□ -2.23
RFC4P35249 AC010999.1-201ENST00000611856 324 ntBASIC1.15□□□□□ -2.23
RFC4P35249 AL359075.3-201ENST00000613288 217 ntBASIC1.15□□□□□ -2.23
RFC4P35249 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.15□□□□□ -2.23
RFC4P35249 Y_RNA.106-201ENST00000363189 100 ntBASIC1.14□□□□□ -2.23
RFC4P35249 RNA5SP259-201ENST00000365541 109 ntBASIC1.14□□□□□ -2.23
RFC4P35249 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.14□□□□□ -2.23
RFC4P35249 RPS29P28-201ENST00000446439 141 ntBASIC1.14□□□□□ -2.23
RFC4P35249 MTND4P18-201ENST00000447010 465 ntBASIC1.14□□□□□ -2.23
RFC4P35249 HSPE1P13-201ENST00000451143 297 ntBASIC1.14□□□□□ -2.23
RFC4P35249 SNORD5.1-201ENST00000458800 75 ntBASIC1.14□□□□□ -2.23
RFC4P35249 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
RFC4P35249 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
RFC4P35249 AC011352.1-201ENST00000512300 793 ntBASIC1.14□□□□□ -2.23
RFC4P35249 Y_RNA.655-201ENST00000515919 96 ntBASIC1.14□□□□□ -2.23
RFC4P35249 MIR4714-201ENST00000580728 77 ntBASIC1.14□□□□□ -2.23
RFC4P35249 AC073869.6-201ENST00000640656 341 ntBASIC1.14□□□□□ -2.23
RFC4P35249 Y_RNA.374-201ENST00000365606 101 ntBASIC1.13□□□□□ -2.23
RFC4P35249 RNU6-281P-201ENST00000384212 103 ntBASIC1.13□□□□□ -2.23
RFC4P35249 MIR625-201ENST00000385047 85 ntBASIC1.13□□□□□ -2.23
RFC4P35249 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
RFC4P35249 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.13□□□□□ -2.23
RFC4P35249 NDUFB4P10-201ENST00000452541 359 ntBASIC1.13□□□□□ -2.23
RFC4P35249 RNU6-329P-201ENST00000459618 107 ntBASIC1.13□□□□□ -2.23
RFC4P35249 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.13□□□□□ -2.23
RFC4P35249 AC069439.1-201ENST00000494739 167 ntBASIC1.13□□□□□ -2.23
RFC4P35249 MTND5P5-201ENST00000503764 376 ntBASIC1.13□□□□□ -2.23
RFC4P35249 AC093303.1-201ENST00000514549 295 ntBASIC1.13□□□□□ -2.23
RFC4P35249 Y_RNA.706-201ENST00000516933 99 ntBASIC1.13□□□□□ -2.23
RFC4P35249 RNU7-128P-201ENST00000517247 62 ntBASIC1.13□□□□□ -2.23
RFC4P35249 AC018638.8-201ENST00000588755 281 ntBASIC1.13□□□□□ -2.23
RFC4P35249 AC021506.2-201ENST00000612354 169 ntBASIC1.13□□□□□ -2.23
RFC4P35249 AC007014.2-201ENST00000615581 479 ntBASIC1.13□□□□□ -2.23
RFC4P35249 U6.73-201ENST00000619194 103 ntBASIC1.13□□□□□ -2.23
RFC4P35249 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.13□□□□□ -2.23
RFC4P35249 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.13□□□□□ -2.23
RFC4P35249 MTND5P16-201ENST00000460269 1703 ntBASIC1.12□□□□□ -2.23
RFC4P35249 Y_RNA.2-201ENST00000362330 96 ntBASIC1.12□□□□□ -2.23
RFC4P35249 RNU6-1266P-201ENST00000362794 105 ntBASIC1.12□□□□□ -2.23
RFC4P35249 Y_RNA.184-201ENST00000363884 108 ntBASIC1.12□□□□□ -2.23
RFC4P35249 AL139396.1-201ENST00000421137 167 ntBASIC1.12□□□□□ -2.23
RFC4P35249 USMG5P1-201ENST00000425964 177 ntBASIC1.12□□□□□ -2.23
RFC4P35249 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.12□□□□□ -2.23
RFC4P35249 SNORD65B-201ENST00000459126 73 ntBASIC1.12□□□□□ -2.23
RFC4P35249 RN7SKP88-201ENST00000516847 250 ntBASIC1.12□□□□□ -2.23
RFC4P35249 AC023157.2-201ENST00000540596 141 ntBASIC1.12□□□□□ -2.23
RFC4P35249 AC093023.1-201ENST00000547375 507 ntBASIC1.12□□□□□ -2.23
RFC4P35249 AL512310.8-201ENST00000550183 120 ntBASIC1.12□□□□□ -2.23
RFC4P35249 7SK.8-201ENST00000612110 250 ntBASIC1.12□□□□□ -2.23
RFC4P35249 AC040896.1-201ENST00000613819 479 ntBASIC1.12□□□□□ -2.23
RFC4P35249 7SK.11-201ENST00000615477 250 ntBASIC1.12□□□□□ -2.23
RFC4P35249 AC002553.4-201ENST00000616896 331 ntBASIC1.12□□□□□ -2.23
RFC4P35249 MIR8054-201ENST00000620877 86 ntBASIC1.12□□□□□ -2.23
RFC4P35249 7SK.13-201ENST00000622040 250 ntBASIC1.12□□□□□ -2.23
RFC4P35249 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
RFC4P35249 RNU6-1031P-201ENST00000384773 107 ntBASIC1.11□□□□□ -2.23
RFC4P35249 RNU6-440P-201ENST00000390882 105 ntBASIC1.11□□□□□ -2.23
RFC4P35249 MIR548F5-201ENST00000408421 86 ntBASIC1.11□□□□□ -2.23
RFC4P35249 MIR1277-201ENST00000408536 78 ntBASIC1.11□□□□□ -2.23
RFC4P35249 AC245047.3-201ENST00000429428 127 ntBASIC1.11□□□□□ -2.23
RFC4P35249 USP9YP16-201ENST00000430287 407 ntBASIC1.11□□□□□ -2.23
RFC4P35249 USP9YP23-201ENST00000455085 407 ntBASIC1.11□□□□□ -2.23
RFC4P35249 RNU7-87P-201ENST00000459343 62 ntBASIC1.11□□□□□ -2.23
RFC4P35249 AC026782.1-201ENST00000512952 449 ntBASIC1.11□□□□□ -2.23
RFC4P35249 AC018462.2-201ENST00000605375 395 ntBASIC1.11□□□□□ -2.23
RFC4P35249 AC100812.1-201ENST00000607622 580 ntBASIC1.11□□□□□ -2.23
RFC4P35249 AC108706.1-201ENST00000611053 297 ntBASIC1.11□□□□□ -2.23
RFC4P35249 AC012676.2-201ENST00000619258 186 ntBASIC1.11□□□□□ -2.23
RFC4P35249 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.11□□□□□ -2.23
RFC4P35249 Y_RNA.6-201ENST00000362350 114 ntBASIC1.1□□□□□ -2.23
RFC4P35249 RNU6-1001P-201ENST00000411265 100 ntBASIC1.1□□□□□ -2.23
RFC4P35249 POLR2J4-204ENST00000418424 324 ntBASIC1.1□□□□□ -2.23
RFC4P35249 RPS3AP52-201ENST00000435639 297 ntBASIC1.1□□□□□ -2.23
RFC4P35249 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.1□□□□□ -2.23
RFC4P35249 AC010469.2-201ENST00000496412 480 ntBASIC1.1□□□□□ -2.23
RFC4P35249 RNU6-1114P-201ENST00000516022 107 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms