Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MIR3670-2-201ENST00000582974 65 ntBASIC2.56□□□□□ -2
SLC6A4P31645 MIR3670-1-201ENST00000584160 65 ntBASIC2.56□□□□□ -2
SLC6A4P31645 MIR3670-3-201ENST00000584855 65 ntBASIC2.56□□□□□ -2
SLC6A4P31645 Z83818.1-201ENST00000603584 150 ntBASIC2.56□□□□□ -2
SLC6A4P31645 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.56□□□□□ -2
SLC6A4P31645 MIR3670-4-201ENST00000612260 65 ntBASIC2.56□□□□□ -2
SLC6A4P31645 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.56□□□□□ -2
SLC6A4P31645 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.56□□□□□ -2
SLC6A4P31645 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.55□□□□□ -2
SLC6A4P31645 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.55□□□□□ -2
SLC6A4P31645 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
SLC6A4P31645 RNA5SP289-201ENST00000362332 137 ntBASIC2.55□□□□□ -2
SLC6A4P31645 Y_RNA.117-201ENST00000363294 101 ntBASIC2.55□□□□□ -2
SLC6A4P31645 SNORA25B-201ENST00000365507 128 ntBASIC2.55□□□□□ -2
SLC6A4P31645 Y_RNA.368-201ENST00000365547 113 ntBASIC2.55□□□□□ -2
SLC6A4P31645 Y_RNA.456-201ENST00000384232 111 ntBASIC2.55□□□□□ -2
SLC6A4P31645 RN7SKP192-201ENST00000411291 327 ntBASIC2.55□□□□□ -2
SLC6A4P31645 AC009238.1-201ENST00000442165 424 ntBASIC2.55□□□□□ -2
SLC6A4P31645 AC104389.3-201ENST00000445629 235 ntBASIC2.55□□□□□ -2
SLC6A4P31645 AC009237.6-201ENST00000446969 424 ntBASIC2.55□□□□□ -2
SLC6A4P31645 RNU6-667P-201ENST00000517186 102 ntBASIC2.55□□□□□ -2
SLC6A4P31645 AC025647.1-201ENST00000517879 253 ntBASIC2.55□□□□□ -2
SLC6A4P31645 AC136628.3-201ENST00000521868 290 ntBASIC2.55□□□□□ -2
SLC6A4P31645 PRELID2P1-201ENST00000552837 301 ntBASIC2.55□□□□□ -2
SLC6A4P31645 MIR5092-201ENST00000583139 88 ntBASIC2.55□□□□□ -2
SLC6A4P31645 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.55□□□□□ -2
SLC6A4P31645 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
SLC6A4P31645 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
SLC6A4P31645 MIR411-201ENST00000362239 96 ntBASIC2.54□□□□□ -2
SLC6A4P31645 U8.2-201ENST00000363156 134 ntBASIC2.54□□□□□ -2
SLC6A4P31645 RNA5SP456-201ENST00000364002 114 ntBASIC2.54□□□□□ -2
SLC6A4P31645 RNU6-743P-201ENST00000364151 106 ntBASIC2.54□□□□□ -2
SLC6A4P31645 Y_RNA.274-201ENST00000364714 101 ntBASIC2.54□□□□□ -2
SLC6A4P31645 RNU6-1240P-201ENST00000365155 104 ntBASIC2.54□□□□□ -2
SLC6A4P31645 RNU6-418P-201ENST00000384035 107 ntBASIC2.54□□□□□ -2
SLC6A4P31645 AL359511.1-201ENST00000402970 211 ntBASIC2.54□□□□□ -2
SLC6A4P31645 Y_RNA.626-201ENST00000411288 95 ntBASIC2.54□□□□□ -2
SLC6A4P31645 MTND5P15-201ENST00000434246 349 ntBASIC2.54□□□□□ -2
SLC6A4P31645 MTCO1P44-201ENST00000441935 243 ntBASIC2.54□□□□□ -2
SLC6A4P31645 AC016717.1-201ENST00000448918 286 ntBASIC2.54□□□□□ -2
SLC6A4P31645 HSPE1P13-201ENST00000451143 297 ntBASIC2.54□□□□□ -2
SLC6A4P31645 AC010531.2-201ENST00000465012 153 ntBASIC2.54□□□□□ -2
SLC6A4P31645 AC018868.1-201ENST00000491307 315 ntBASIC2.54□□□□□ -2
SLC6A4P31645 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.54□□□□□ -2
SLC6A4P31645 NDUFA5P6-201ENST00000542110 379 ntBASIC2.54□□□□□ -2
SLC6A4P31645 AC025754.2-201ENST00000606491 432 ntBASIC2.54□□□□□ -2
SLC6A4P31645 CTSLP2-204ENST00000629029 392 ntBASIC2.54□□□□□ -2
SLC6A4P31645 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
SLC6A4P31645 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SLC6A4P31645 SNORA27.1-201ENST00000362604 124 ntBASIC2.53□□□□□ -2
SLC6A4P31645 SNORA20B-201ENST00000384220 132 ntBASIC2.53□□□□□ -2
SLC6A4P31645 SNORD14D-201ENST00000384390 87 ntBASIC2.53□□□□□ -2
SLC6A4P31645 MT-TR-201ENST00000387439 65 ntBASIC2.53□□□□□ -2
SLC6A4P31645 RNU6-855P-201ENST00000410395 104 ntBASIC2.53□□□□□ -2
SLC6A4P31645 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.53□□□□□ -2
SLC6A4P31645 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.53□□□□□ -2
SLC6A4P31645 RPL23AP7-203ENST00000449021 469 ntBASIC2.53□□□□□ -2
SLC6A4P31645 Y_RNA.644-201ENST00000459006 113 ntBASIC2.53□□□□□ -2
SLC6A4P31645 SNORD65B-201ENST00000459126 73 ntBASIC2.53□□□□□ -2
SLC6A4P31645 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.53□□□□□ -2
SLC6A4P31645 SNORD116-28-201ENST00000516123 91 ntBASIC2.53□□□□□ -2
SLC6A4P31645 RNU6-991P-201ENST00000516168 107 ntBASIC2.53□□□□□ -2
SLC6A4P31645 Y_RNA.674-201ENST00000516362 113 ntBASIC2.53□□□□□ -2
SLC6A4P31645 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.53□□□□□ -2
SLC6A4P31645 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.53□□□□□ -2
SLC6A4P31645 snoU18.1-201ENST00000629629 71 ntBASIC2.53□□□□□ -2
SLC6A4P31645 AC007336.1-201ENST00000576365 3828 ntBASIC2.53□□□□□ -2
SLC6A4P31645 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SLC6A4P31645 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLC6A4P31645 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLC6A4P31645 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLC6A4P31645 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC6A4P31645 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLC6A4P31645 VTRNA1-1-201ENST00000363120 99 ntBASIC2.52□□□□□ -2.01
SLC6A4P31645 Y_RNA.99-201ENST00000363138 105 ntBASIC2.52□□□□□ -2.01
SLC6A4P31645 Y_RNA.262-201ENST00000364641 102 ntBASIC2.52□□□□□ -2.01
SLC6A4P31645 Y_RNA.287-201ENST00000364853 94 ntBASIC2.52□□□□□ -2.01
SLC6A4P31645 Y_RNA.304-201ENST00000365011 112 ntBASIC2.52□□□□□ -2.01
SLC6A4P31645 Y_RNA.341-201ENST00000365341 102 ntBASIC2.52□□□□□ -2.01
SLC6A4P31645 RNU1-109P-201ENST00000383960 147 ntBASIC2.52□□□□□ -2.01
SLC6A4P31645 RNU6-211P-201ENST00000384047 107 ntBASIC2.52□□□□□ -2.01
SLC6A4P31645 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
SLC6A4P31645 AL355796.1-201ENST00000406706 323 ntBASIC2.52□□□□□ -2.01
SLC6A4P31645 Y_RNA.793-201ENST00000411222 111 ntBASIC2.52□□□□□ -2.01
SLC6A4P31645 EDDM3CP-201ENST00000415977 425 ntBASIC2.52□□□□□ -2.01
SLC6A4P31645 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
SLC6A4P31645 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.52□□□□□ -2.01
SLC6A4P31645 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC6A4P31645 RNU6-856P-201ENST00000516959 98 ntBASIC2.52□□□□□ -2.01
SLC6A4P31645 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC6A4P31645 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SLC6A4P31645 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
SLC6A4P31645 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC6A4P31645 BTF3P11-201ENST00000426582 477 ntBASIC2.51□□□□□ -2.01
SLC6A4P31645 CR769767.1-201ENST00000436337 346 ntBASIC2.51□□□□□ -2.01
SLC6A4P31645 AC245102.2-201ENST00000448956 180 ntBASIC2.51□□□□□ -2.01
SLC6A4P31645 RPS26P55-201ENST00000471178 356 ntBASIC2.51□□□□□ -2.01
SLC6A4P31645 RNU6-1146P-201ENST00000516282 102 ntBASIC2.51□□□□□ -2.01
SLC6A4P31645 AC087441.2-201ENST00000529141 262 ntBASIC2.51□□□□□ -2.01
SLC6A4P31645 CBX3P4-201ENST00000538909 354 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms