Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC-1.02□□□□□ -2.57
CLIP1P30622 MTATP6P26-201ENST00000445926 662 ntBASIC-1.02□□□□□ -2.57
CLIP1P30622 AC109327.2-201ENST00000448339 378 ntBASIC-1.02□□□□□ -2.57
CLIP1P30622 AC046134.1-201ENST00000514454 666 ntBASIC-1.02□□□□□ -2.57
CLIP1P30622 RNU7-156P-201ENST00000517214 74 ntBASIC-1.02□□□□□ -2.57
CLIP1P30622 RNA5SP454-201ENST00000517231 127 ntBASIC-1.02□□□□□ -2.57
CLIP1P30622 MIR3681-201ENST00000580089 72 ntBASIC-1.02□□□□□ -2.57
CLIP1P30622 SNORD92-201ENST00000585078 85 ntBASIC-1.02□□□□□ -2.57
CLIP1P30622 AC120024.3-201ENST00000603167 156 ntBASIC-1.02□□□□□ -2.57
CLIP1P30622 TCL6_2.1-201ENST00000615162 119 ntBASIC-1.02□□□□□ -2.57
CLIP1P30622 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC-1.02□□□□□ -2.57
CLIP1P30622 RNU6-428P-201ENST00000362942 107 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 RNU5B-1-201ENST00000363286 116 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 MIR125B2-201ENST00000385128 89 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 MT-TN-201ENST00000387400 73 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 MIR196A1-201ENST00000388006 70 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 RNU2-54P-201ENST00000410299 190 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 MTCO1P17-201ENST00000411522 491 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 AL353572.1-201ENST00000442490 417 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 AC009237.7-201ENST00000447357 229 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.03□□□□□ -2.57
CLIP1P30622 AC091885.1-201ENST00000506658 268 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.03□□□□□ -2.57
CLIP1P30622 RNU6-123P-201ENST00000516163 102 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 AC068587.5-201ENST00000528506 175 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 AC144521.1-201ENST00000607148 956 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 MIR6507-201ENST00000613630 70 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 AC134878.1-201ENST00000619901 243 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 AC099786.3-201ENST00000565735 1410 ntBASIC-1.03□□□□□ -2.57
CLIP1P30622 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 U6.112-201ENST00000384129 70 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 MIR136-201ENST00000385207 82 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 MTCO2P33-201ENST00000402100 465 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 CALM2P2-201ENST00000428512 440 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 MTCO3P8-201ENST00000453691 755 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 snoU13.6-201ENST00000458785 104 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 SNORD123-201ENST00000459473 70 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC-1.04□□□□□ -2.58
CLIP1P30622 AC008628.2-201ENST00000502605 298 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 AC012467.1-201ENST00000607740 256 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 AL136221.1-201ENST00000621449 509 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 AC027279.3-201ENST00000625055 122 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 SNORA43.4-201ENST00000629559 138 ntBASIC-1.04□□□□□ -2.58
CLIP1P30622 RNU6-873P-201ENST00000363833 107 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 Y_RNA.203-201ENST00000364106 102 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 SNORA67.2-201ENST00000384300 149 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 RNY1P7-201ENST00000384743 110 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 SNORA75.1-201ENST00000391130 148 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-1.05□□□□□ -2.58
CLIP1P30622 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-1.05□□□□□ -2.58
CLIP1P30622 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 RNA5SP47-201ENST00000517230 109 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 RNA5SP169-201ENST00000517268 117 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-1.05□□□□□ -2.58
CLIP1P30622 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-1.05□□□□□ -2.58
CLIP1P30622 MIR4677-201ENST00000584153 80 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 MIR4438-201ENST00000585271 93 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-1.05□□□□□ -2.58
CLIP1P30622 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.05□□□□□ -2.58
CLIP1P30622 AC072039.2-201ENST00000608883 439 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 AC016597.2-201ENST00000613256 341 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 AL139418.1-201ENST00000613613 177 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 AL078596.1-201ENST00000624856 447 ntBASIC-1.05□□□□□ -2.58
CLIP1P30622 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 Y_RNA.100-201ENST00000363141 102 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 RNU6-371P-201ENST00000364283 108 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 RNU6-25P-201ENST00000383873 107 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 RNU6-15P-201ENST00000384534 107 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 RNU6-29P-201ENST00000384637 107 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 ELOCP21-201ENST00000412558 336 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 AC243428.1-201ENST00000421099 264 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 SNAP23P1-201ENST00000433229 246 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 MTND3P25-201ENST00000509243 135 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.06□□□□□ -2.58
CLIP1P30622 AP002004.2-201ENST00000531656 154 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-1.06□□□□□ -2.58
CLIP1P30622 MTND1P8-201ENST00000571424 950 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 OR4H6P-202ENST00000603819 340 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 AP000753.3-201ENST00000604083 169 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 ELOCP17-201ENST00000414751 326 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 AL390729.2-201ENST00000416137 156 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 AL953862.1-201ENST00000423016 168 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.06□□□□□ -2.58
CLIP1P30622 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-1.06□□□□□ -2.58
CLIP1P30622 AC005178.1-201ENST00000508392 440 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 RNU6-1225P-201ENST00000516336 65 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 RNU6-341P-201ENST00000516973 96 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.06□□□□□ -2.58
CLIP1P30622 MIR544B-201ENST00000582372 78 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 AL445435.1-201ENST00000604232 665 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 AC063944.3-201ENST00000609969 533 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.06□□□□□ -2.58
CLIP1P30622 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.06□□□□□ -2.58
CLIP1P30622 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.06□□□□□ -2.58
CLIP1P30622 MIR101-2-201ENST00000362195 79 ntBASIC-1.07□□□□□ -2.58
CLIP1P30622 RNU6-511P-201ENST00000363496 107 ntBASIC-1.07□□□□□ -2.58
CLIP1P30622 RNU6-960P-201ENST00000364056 120 ntBASIC-1.07□□□□□ -2.58
CLIP1P30622 RNY3P13-201ENST00000365542 102 ntBASIC-1.07□□□□□ -2.58
CLIP1P30622 RNU6-125P-201ENST00000384505 107 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms