Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.16□□□□□ -2.38
COL4A5P29400 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.16□□□□□ -2.38
COL4A5P29400 AL035398.1-201ENST00000430869 322 ntBASIC0.16□□□□□ -2.38
COL4A5P29400 TPTE2P5-203ENST00000458118 728 ntBASIC0.16□□□□□ -2.38
COL4A5P29400 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.16□□□□□ -2.38
COL4A5P29400 AC005178.1-201ENST00000508392 440 ntBASIC0.16□□□□□ -2.38
COL4A5P29400 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.16□□□□□ -2.38
COL4A5P29400 AL391903.3-201ENST00000612158 163 ntBASIC0.16□□□□□ -2.38
COL4A5P29400 AC022306.3-201ENST00000619930 550 ntBASIC0.16□□□□□ -2.38
COL4A5P29400 AC106754.1-201ENST00000562632 1513 ntBASIC0.15□□□□□ -2.38
COL4A5P29400 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
COL4A5P29400 Y_RNA.267-201ENST00000364679 109 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 MIR520C-201ENST00000385005 87 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 SNORD105-201ENST00000386910 85 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 SNORA75.2-201ENST00000391138 150 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 SNORA75.3-201ENST00000391231 150 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 RN7SKP142-201ENST00000411236 328 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 AL663109.1-201ENST00000411498 844 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.15□□□□□ -2.39
COL4A5P29400 TPT1P7-201ENST00000458300 517 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 AC002350.1-201ENST00000490759 375 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 RNU6-430P-201ENST00000517078 107 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 AC104383.1-201ENST00000530297 370 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.15□□□□□ -2.39
COL4A5P29400 HIF1AP1-201ENST00000553642 175 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 MIR3192-201ENST00000584920 77 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 AF246928.1-201ENST00000623768 87 ntBASIC0.15□□□□□ -2.39
COL4A5P29400 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.15□□□□□ -2.39
COL4A5P29400 MIR1-1-201ENST00000362147 71 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 SNORA9.1-201ENST00000362412 131 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 SNORD18A-201ENST00000363753 72 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 Y_RNA.179-201ENST00000363844 90 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 RNU6-996P-201ENST00000365438 107 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 RNU6-1329P-201ENST00000365664 107 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 MTND4P32-201ENST00000437189 1237 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 MTND4P18-201ENST00000447010 465 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 snoU13.11-201ENST00000459219 104 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 HMGN2P26-201ENST00000463169 339 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.14□□□□□ -2.39
COL4A5P29400 AC010598.1-201ENST00000510378 103 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 SNORA18.6-201ENST00000516792 115 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 RNU6-1096P-201ENST00000517089 102 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 RNA5SP454-201ENST00000517231 127 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 AP002004.2-201ENST00000531656 154 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC0.14□□□□□ -2.39
COL4A5P29400 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 RNU6-1084P-201ENST00000362498 107 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 MIR136-201ENST00000385207 82 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.14□□□□□ -2.39
COL4A5P29400 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.14□□□□□ -2.39
COL4A5P29400 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.14□□□□□ -2.39
COL4A5P29400 AC016909.1-201ENST00000415916 166 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 MTATP6P18-201ENST00000417994 673 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 AC133104.1-201ENST00000429100 218 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 AL356010.1-201ENST00000456364 102 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC0.14□□□□□ -2.39
COL4A5P29400 RNU6-1278P-201ENST00000516130 107 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 RNU7-172P-201ENST00000517125 64 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 AC104576.1-201ENST00000524225 88 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.14□□□□□ -2.39
COL4A5P29400 AC023157.2-201ENST00000540596 141 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 AL357078.3-201ENST00000607528 618 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.14□□□□□ -2.39
COL4A5P29400 AL354950.2-201ENST00000617939 290 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 AC139792.3-201ENST00000623525 224 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 SCARNA4-201ENST00000629045 128 ntBASIC0.14□□□□□ -2.39
COL4A5P29400 RNU6-945P-201ENST00000383947 107 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 MTCYBP10-201ENST00000424905 650 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 MTCO2P12-201ENST00000427426 682 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.13□□□□□ -2.39
COL4A5P29400 RNU7-125P-201ENST00000458760 62 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 AC097462.1-201ENST00000514125 324 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 RNU6-189P-201ENST00000516120 101 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 AF235103.2-201ENST00000525753 346 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 FRG2DP-202ENST00000566967 323 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 AC023827.1-201ENST00000569247 97 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 CPDP1-201ENST00000579660 283 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 MIR548AB-201ENST00000584917 84 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 AC005014.3-201ENST00000605985 190 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 HULC.1-201ENST00000612720 240 ntBASIC0.13□□□□□ -2.39
COL4A5P29400 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.13□□□□□ -2.39
COL4A5P29400 RNU6-349P-201ENST00000362402 107 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 SNORD87-201ENST00000364849 89 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 MIR521-1-201ENST00000384902 87 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 SNORD41-201ENST00000386967 70 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 RNU6-994P-201ENST00000410507 111 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.12□□□□□ -2.39
COL4A5P29400 MTCO3P19-201ENST00000415864 321 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 CALM2P4-201ENST00000430810 426 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 RPS29P8-201ENST00000445109 171 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC0.12□□□□□ -2.39
COL4A5P29400 RNU7-63P-201ENST00000459054 62 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.12□□□□□ -2.39
COL4A5P29400 RNA5SP20-201ENST00000515976 84 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 EIF1P4-201ENST00000572664 335 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 AC131055.1-201ENST00000584626 316 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 uc_338.34-201ENST00000617467 174 ntBASIC0.12□□□□□ -2.39
COL4A5P29400 RNU6-376P-201ENST00000384731 106 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 CYCSP46-201ENST00000423569 204 ntBASIC0.11□□□□□ -2.39
COL4A5P29400 AP000870.1-201ENST00000472927 406 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms