Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 MIR1287-201ENST00000408492 90 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.41□□□□□ -2.18
PTPN4P29074 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.41□□□□□ -2.18
PTPN4P29074 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.41□□□□□ -2.18
PTPN4P29074 UBE2V1P7-201ENST00000446395 340 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 RPS26P55-201ENST00000471178 356 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 AC079140.2-201ENST00000506193 142 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.41□□□□□ -2.18
PTPN4P29074 Y_RNA.702-201ENST00000516843 96 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 MIR3684-201ENST00000579779 74 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 AP001094.1-201ENST00000579805 193 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.41□□□□□ -2.18
PTPN4P29074 AL357075.2-201ENST00000614906 189 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 MIR8070-201ENST00000616510 88 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 AC087588.2-201ENST00000617667 426 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 AC100821.1-201ENST00000523153 2479 ntBASIC1.41□□□□□ -2.18
PTPN4P29074 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PTPN4P29074 Y_RNA.70-201ENST00000362886 110 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 RNU4-13P-201ENST00000364019 141 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 RNU6-879P-201ENST00000364328 108 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 Y_RNA.259-201ENST00000364619 101 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 Y_RNA.384-201ENST00000383909 102 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 RNU6-318P-201ENST00000384283 103 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 RNU6-417P-201ENST00000384712 107 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 RNY4P36-201ENST00000391116 96 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.4□□□□□ -2.19
PTPN4P29074 AC093019.1-201ENST00000443135 252 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 ELOCP24-201ENST00000456370 334 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 MIR2053-201ENST00000459295 91 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.4□□□□□ -2.19
PTPN4P29074 RNU6-470P-201ENST00000515954 104 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 RNU1-142P-201ENST00000516682 145 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 Y_RNA.718-201ENST00000517110 102 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 RNU6-264P-201ENST00000517134 104 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 RNA5SP437-201ENST00000517249 129 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 AC022868.1-201ENST00000517767 391 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 AL355375.2-201ENST00000574825 175 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 MIR4709-201ENST00000577272 72 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 MIR4421-201ENST00000578133 69 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 SNORA77B-201ENST00000578179 125 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 AC022432.1-201ENST00000595739 310 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 AC080078.3-201ENST00000605407 463 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 AL359075.3-201ENST00000613288 217 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.4□□□□□ -2.19
PTPN4P29074 AC006435.5-201ENST00000624486 112 ntBASIC1.4□□□□□ -2.19
PTPN4P29074 Y_RNA.529-201ENST00000384586 119 ntBASIC1.39□□□□□ -2.19
PTPN4P29074 MIR559-201ENST00000385188 96 ntBASIC1.39□□□□□ -2.19
PTPN4P29074 RNU6-1156P-201ENST00000410365 100 ntBASIC1.39□□□□□ -2.19
PTPN4P29074 ELOCP21-201ENST00000412558 336 ntBASIC1.39□□□□□ -2.19
PTPN4P29074 AL354695.1-201ENST00000427935 228 ntBASIC1.39□□□□□ -2.19
PTPN4P29074 TOMM22P2-201ENST00000430735 237 ntBASIC1.39□□□□□ -2.19
PTPN4P29074 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.39□□□□□ -2.19
PTPN4P29074 RN7SKP49-201ENST00000516675 260 ntBASIC1.39□□□□□ -2.19
PTPN4P29074 AL137100.2-201ENST00000555786 315 ntBASIC1.39□□□□□ -2.19
PTPN4P29074 AC133104.2-201ENST00000615272 193 ntBASIC1.39□□□□□ -2.19
PTPN4P29074 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.39□□□□□ -2.19
PTPN4P29074 RNU6-1301P-201ENST00000362724 104 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 RNU6-392P-201ENST00000364926 101 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 RNU6-1065P-201ENST00000384513 106 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 MIR625-201ENST00000385047 85 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 SNORA69.1-201ENST00000390904 137 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 RNA5SP467-201ENST00000391274 118 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 Y_RNA.592-201ENST00000410274 109 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.38□□□□□ -2.19
PTPN4P29074 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.38□□□□□ -2.19
PTPN4P29074 UQCRBP2-201ENST00000447827 297 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 Y_RNA.632-201ENST00000459189 102 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 RNU7-94P-201ENST00000459576 63 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 AC099513.1-201ENST00000490423 301 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 AC105758.1-201ENST00000506038 399 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 RNU6-107P-201ENST00000516643 102 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 MIR2355-201ENST00000517199 87 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 AC073544.1-201ENST00000600110 1595 ntBASIC1.38□□□□□ -2.19
PTPN4P29074 SNORD1A-201ENST00000364968 72 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 SNORA25.9-201ENST00000365087 128 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 Y_RNA.356-201ENST00000365475 113 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 RNU6-1264P-201ENST00000383891 107 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 MIR499A-201ENST00000384903 122 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 AC114482.1-201ENST00000418010 247 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 MRPS18CP6-201ENST00000423587 223 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 MTATP6P23-201ENST00000440153 476 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 AC074133.1-201ENST00000515696 183 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 RNU7-4P-201ENST00000516961 62 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.37□□□□□ -2.19
PTPN4P29074 AC093027.1-201ENST00000546698 429 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.37□□□□□ -2.19
PTPN4P29074 MIR3937-201ENST00000580135 106 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 AC112487.2-201ENST00000637950 304 ntBASIC1.37□□□□□ -2.19
PTPN4P29074 RNU6-1123P-201ENST00000362347 106 ntBASIC1.36□□□□□ -2.19
PTPN4P29074 RNU6-1040P-201ENST00000383974 107 ntBASIC1.36□□□□□ -2.19
PTPN4P29074 RPL30P13-201ENST00000418873 348 ntBASIC1.36□□□□□ -2.19
PTPN4P29074 AC015922.2-201ENST00000435593 184 ntBASIC1.36□□□□□ -2.19
PTPN4P29074 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.36□□□□□ -2.19
PTPN4P29074 PCNPP5-201ENST00000452246 481 ntBASIC1.36□□□□□ -2.19
PTPN4P29074 RNU7-152P-201ENST00000458982 64 ntBASIC1.36□□□□□ -2.19
PTPN4P29074 SNORD19B-201ENST00000459623 84 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms