Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 Y_RNA.310-201ENST00000365063 113 ntBASIC3.31□□□□□ -1.88
ERCC3P19447 Y_RNA.361-201ENST00000365515 120 ntBASIC3.31□□□□□ -1.88
ERCC3P19447 MIR29C-201ENST00000385231 88 ntBASIC3.31□□□□□ -1.88
ERCC3P19447 Y_RNA.626-201ENST00000411288 95 ntBASIC3.31□□□□□ -1.88
ERCC3P19447 OOSP1P1-201ENST00000423265 274 ntBASIC3.31□□□□□ -1.88
ERCC3P19447 HSPE1P13-201ENST00000451143 297 ntBASIC3.31□□□□□ -1.88
ERCC3P19447 AC117454.1-201ENST00000491120 168 ntBASIC3.31□□□□□ -1.88
ERCC3P19447 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.31□□□□□ -1.88
ERCC3P19447 MIR6733-201ENST00000635723 61 ntBASIC3.31□□□□□ -1.88
ERCC3P19447 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.31□□□□□ -1.88
ERCC3P19447 AL161431.1-201ENST00000618966 4205 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 AC108206.1-201ENST00000570186 4159 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ERCC3P19447 RNU4-82P-201ENST00000362443 140 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 RNA5SP393-201ENST00000363423 117 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 Y_RNA.274-201ENST00000364714 101 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 SNORA72.4-201ENST00000384174 132 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 RNA5SP467-201ENST00000391274 118 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 RNA5SP270-201ENST00000411361 118 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 BX510359.4-201ENST00000423750 193 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 RPS15AP28-201ENST00000435088 386 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 CR769767.1-201ENST00000436337 346 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 Z98949.2-201ENST00000440996 144 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 RNU1-131P-201ENST00000458943 161 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 Y_RNA.637-201ENST00000459424 114 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 MIR3124-201ENST00000582636 67 ntBASIC3.3□□□□□ -1.88
ERCC3P19447 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
ERCC3P19447 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
ERCC3P19447 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
ERCC3P19447 RNU6-1164P-201ENST00000364428 107 ntBASIC3.29□□□□□ -1.88
ERCC3P19447 Y_RNA.308-201ENST00000365043 101 ntBASIC3.29□□□□□ -1.88
ERCC3P19447 RNU11-3P-201ENST00000391111 133 ntBASIC3.29□□□□□ -1.88
ERCC3P19447 SNORD58.1-201ENST00000391313 66 ntBASIC3.29□□□□□ -1.88
ERCC3P19447 RNU2-52P-201ENST00000410680 190 ntBASIC3.29□□□□□ -1.88
ERCC3P19447 SNORD109B-201ENST00000458961 67 ntBASIC3.29□□□□□ -1.88
ERCC3P19447 SNORD109A-201ENST00000459128 67 ntBASIC3.29□□□□□ -1.88
ERCC3P19447 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.29□□□□□ -1.88
ERCC3P19447 AC097462.1-201ENST00000514125 324 ntBASIC3.29□□□□□ -1.88
ERCC3P19447 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.29□□□□□ -1.88
ERCC3P19447 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ERCC3P19447 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
ERCC3P19447 RNU6-862P-201ENST00000362804 105 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 RNU6-899P-201ENST00000363947 107 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 RNU6-923P-201ENST00000364753 107 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.28□□□□□ -1.88
ERCC3P19447 SNORA40.19-201ENST00000390846 128 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 RNA5SP274-201ENST00000410484 108 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 RNA5SP511-201ENST00000410487 115 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 Y_RNA.793-201ENST00000411222 111 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.28□□□□□ -1.88
ERCC3P19447 RNU7-141P-201ENST00000459304 62 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 RN7SL636P-201ENST00000497504 294 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.28□□□□□ -1.88
ERCC3P19447 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.28□□□□□ -1.88
ERCC3P19447 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.28□□□□□ -1.88
ERCC3P19447 RNY3P16-201ENST00000516338 101 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 MIR5692C2-201ENST00000577959 77 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 MIR4282-201ENST00000583613 67 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 AC007229.1-201ENST00000590455 412 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 U6.73-201ENST00000619194 103 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 MIR338-201ENST00000636369 67 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ERCC3P19447 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ERCC3P19447 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.28□□□□□ -1.88
ERCC3P19447 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ERCC3P19447 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
ERCC3P19447 RNU1-22P-201ENST00000363334 158 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 RNU6-1205P-201ENST00000363625 106 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 RNY1-201ENST00000364228 113 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 Y_RNA.262-201ENST00000364641 102 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 RNY4P28-201ENST00000365281 93 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 AL139156.1-201ENST00000412785 841 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 AL353689.1-201ENST00000438895 199 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 RN7SL633P-201ENST00000488974 297 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 RNU1-142P-201ENST00000516682 145 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 RNU6-826P-201ENST00000516827 104 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 AC005972.2-201ENST00000604690 348 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 AC004832.4-201ENST00000608952 331 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 AC013791.1-201ENST00000616619 62 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 AL365265.1-201ENST00000621045 234 ntBASIC3.27□□□□□ -1.89
ERCC3P19447 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.27□□□□□ -1.89
ERCC3P19447 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ERCC3P19447 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ERCC3P19447 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ERCC3P19447 MIR411-201ENST00000362239 96 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 RNU1-58P-201ENST00000362413 163 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 RNU1-96P-201ENST00000364163 162 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 SNORD88.1-201ENST00000408684 91 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 AC007064.1-201ENST00000412238 351 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 EBAG9P1-201ENST00000418955 543 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 AL138752.1-201ENST00000452964 351 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 SNORD2.1-201ENST00000458762 69 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.26□□□□□ -1.89
ERCC3P19447 RNU1-104P-201ENST00000517280 175 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.26□□□□□ -1.89
ERCC3P19447 MIR3945-201ENST00000581853 98 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 POLR3GP1-201ENST00000594073 261 ntBASIC3.26□□□□□ -1.89
ERCC3P19447 AC073413.2-201ENST00000604332 360 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms