Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 MIR5187-201ENST00000583479 76 ntBASIC2.82□□□□□ -1.96
ATF4P18848 AC006023.1-201ENST00000603944 259 ntBASIC2.82□□□□□ -1.96
ATF4P18848 RNU2-4P-201ENST00000606190 192 ntBASIC2.82□□□□□ -1.96
ATF4P18848 U1.36-201ENST00000620684 176 ntBASIC2.82□□□□□ -1.96
ATF4P18848 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
ATF4P18848 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.81□□□□□ -1.96
ATF4P18848 RNA5SP119-201ENST00000362715 117 ntBASIC2.81□□□□□ -1.96
ATF4P18848 Y_RNA.150-201ENST00000363562 102 ntBASIC2.81□□□□□ -1.96
ATF4P18848 Y_RNA.203-201ENST00000364106 102 ntBASIC2.81□□□□□ -1.96
ATF4P18848 SNORA3A-201ENST00000364113 130 ntBASIC2.81□□□□□ -1.96
ATF4P18848 MIR616-201ENST00000385293 97 ntBASIC2.81□□□□□ -1.96
ATF4P18848 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
ATF4P18848 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.81□□□□□ -1.96
ATF4P18848 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.81□□□□□ -1.96
ATF4P18848 AC107083.1-201ENST00000439643 279 ntBASIC2.81□□□□□ -1.96
ATF4P18848 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.81□□□□□ -1.96
ATF4P18848 Y_RNA.797-201ENST00000515977 94 ntBASIC2.81□□□□□ -1.96
ATF4P18848 RNA5SP76-201ENST00000516277 87 ntBASIC2.81□□□□□ -1.96
ATF4P18848 RNU1-143P-201ENST00000516296 146 ntBASIC2.81□□□□□ -1.96
ATF4P18848 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.81□□□□□ -1.96
ATF4P18848 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.81□□□□□ -1.96
ATF4P18848 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.81□□□□□ -1.96
ATF4P18848 MIR5094-201ENST00000578766 85 ntBASIC2.81□□□□□ -1.96
ATF4P18848 AC078899.2-201ENST00000595282 212 ntBASIC2.81□□□□□ -1.96
ATF4P18848 AL929325.1-201ENST00000603096 117 ntBASIC2.81□□□□□ -1.96
ATF4P18848 U1.23-201ENST00000610293 146 ntBASIC2.81□□□□□ -1.96
ATF4P18848 RNU1-68P-201ENST00000615382 146 ntBASIC2.81□□□□□ -1.96
ATF4P18848 U1.39-201ENST00000621562 146 ntBASIC2.81□□□□□ -1.96
ATF4P18848 AC022513.1-201ENST00000624512 117 ntBASIC2.81□□□□□ -1.96
ATF4P18848 AC012442.3-202ENST00000636742 206 ntBASIC2.81□□□□□ -1.96
ATF4P18848 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.81□□□□□ -1.96
ATF4P18848 AC068700.1-201ENST00000565862 3754 ntBASIC2.81□□□□□ -1.96
ATF4P18848 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ATF4P18848 MIR670-201ENST00000390142 98 ntBASIC2.8□□□□□ -1.96
ATF4P18848 MIR548I3-201ENST00000408378 149 ntBASIC2.8□□□□□ -1.96
ATF4P18848 MIR548I1-201ENST00000408810 149 ntBASIC2.8□□□□□ -1.96
ATF4P18848 TRBV12-1-201ENST00000479785 344 ntBASIC2.8□□□□□ -1.96
ATF4P18848 RNU2-27P-201ENST00000516185 142 ntBASIC2.8□□□□□ -1.96
ATF4P18848 RNU6-1291P-201ENST00000516591 104 ntBASIC2.8□□□□□ -1.96
ATF4P18848 MIR4744-201ENST00000581563 82 ntBASIC2.8□□□□□ -1.96
ATF4P18848 AL391903.3-201ENST00000612158 163 ntBASIC2.8□□□□□ -1.96
ATF4P18848 JPX_2.1-201ENST00000614161 69 ntBASIC2.8□□□□□ -1.96
ATF4P18848 AC073476.4-201ENST00000628409 72 ntBASIC2.8□□□□□ -1.96
ATF4P18848 U6.106-201ENST00000636360 105 ntBASIC2.8□□□□□ -1.96
ATF4P18848 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
ATF4P18848 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ATF4P18848 Y_RNA.182-201ENST00000363880 111 ntBASIC2.79□□□□□ -1.96
ATF4P18848 RNU6-886P-201ENST00000384319 105 ntBASIC2.79□□□□□ -1.96
ATF4P18848 SNORA46-201ENST00000384762 135 ntBASIC2.79□□□□□ -1.96
ATF4P18848 SNORD105B-201ENST00000458770 79 ntBASIC2.79□□□□□ -1.96
ATF4P18848 RNU6-1007P-201ENST00000516586 107 ntBASIC2.79□□□□□ -1.96
ATF4P18848 RNU2-56P-201ENST00000516826 190 ntBASIC2.79□□□□□ -1.96
ATF4P18848 RNU1-104P-201ENST00000517280 175 ntBASIC2.79□□□□□ -1.96
ATF4P18848 AP002004.2-201ENST00000531656 154 ntBASIC2.79□□□□□ -1.96
ATF4P18848 AC084364.2-201ENST00000546924 395 ntBASIC2.79□□□□□ -1.96
ATF4P18848 AC087499.8-201ENST00000578406 226 ntBASIC2.79□□□□□ -1.96
ATF4P18848 AC080100.1-201ENST00000624239 5356 ntBASIC2.79□□□□□ -1.96
ATF4P18848 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ATF4P18848 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ATF4P18848 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.78□□□□□ -1.96
ATF4P18848 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
ATF4P18848 RNU6-682P-201ENST00000363843 106 ntBASIC2.78□□□□□ -1.96
ATF4P18848 snoU2_19.4-201ENST00000364329 80 ntBASIC2.78□□□□□ -1.96
ATF4P18848 Y_RNA.229-201ENST00000364347 113 ntBASIC2.78□□□□□ -1.96
ATF4P18848 MIR30B-201ENST00000384850 88 ntBASIC2.78□□□□□ -1.96
ATF4P18848 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.78□□□□□ -1.96
ATF4P18848 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.78□□□□□ -1.96
ATF4P18848 RN7SL297P-201ENST00000483161 293 ntBASIC2.78□□□□□ -1.96
ATF4P18848 RNU1-95P-201ENST00000516357 160 ntBASIC2.78□□□□□ -1.96
ATF4P18848 RNU1-128P-201ENST00000516704 160 ntBASIC2.78□□□□□ -1.96
ATF4P18848 RNU7-193P-201ENST00000516723 65 ntBASIC2.78□□□□□ -1.96
ATF4P18848 SNORA31.25-201ENST00000517242 134 ntBASIC2.78□□□□□ -1.96
ATF4P18848 MIR5194-201ENST00000582634 120 ntBASIC2.78□□□□□ -1.96
ATF4P18848 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.78□□□□□ -1.96
ATF4P18848 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ATF4P18848 Y_RNA.180-201ENST00000363867 113 ntBASIC2.77□□□□□ -1.97
ATF4P18848 Y_RNA.240-201ENST00000364469 95 ntBASIC2.77□□□□□ -1.97
ATF4P18848 Y_RNA.572-201ENST00000384757 98 ntBASIC2.77□□□□□ -1.97
ATF4P18848 SNORA48.1-201ENST00000390879 135 ntBASIC2.77□□□□□ -1.97
ATF4P18848 RNU6-1228P-201ENST00000391014 107 ntBASIC2.77□□□□□ -1.97
ATF4P18848 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.77□□□□□ -1.97
ATF4P18848 AC245047.8-201ENST00000456455 284 ntBASIC2.77□□□□□ -1.97
ATF4P18848 AL049830.1-201ENST00000468034 425 ntBASIC2.77□□□□□ -1.97
ATF4P18848 Y_RNA.714-201ENST00000517065 90 ntBASIC2.77□□□□□ -1.97
ATF4P18848 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.77□□□□□ -1.97
ATF4P18848 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC2.77□□□□□ -1.97
ATF4P18848 AL121772.2-201ENST00000614331 297 ntBASIC2.77□□□□□ -1.97
ATF4P18848 AC245884.12-201ENST00000615364 59 ntBASIC2.77□□□□□ -1.97
ATF4P18848 AC084757.4-201ENST00000616350 526 ntBASIC2.77□□□□□ -1.97
ATF4P18848 SNORA71.3-201ENST00000362582 128 ntBASIC2.76□□□□□ -1.97
ATF4P18848 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.76□□□□□ -1.97
ATF4P18848 RNU6-312P-201ENST00000364629 107 ntBASIC2.76□□□□□ -1.97
ATF4P18848 RNU6-1080P-201ENST00000383982 107 ntBASIC2.76□□□□□ -1.97
ATF4P18848 SNORA5A-201ENST00000384111 134 ntBASIC2.76□□□□□ -1.97
ATF4P18848 RNY3P5-201ENST00000384127 102 ntBASIC2.76□□□□□ -1.97
ATF4P18848 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
ATF4P18848 AC245047.3-201ENST00000429428 127 ntBASIC2.76□□□□□ -1.97
ATF4P18848 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.76□□□□□ -1.97
ATF4P18848 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.76□□□□□ -1.97
ATF4P18848 RNU6-826P-201ENST00000516827 104 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms