Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 AP002001.1-203ENST00000534002 267 ntBASIC1.88□□□□□ -2.11
ACTN1P12814 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.88□□□□□ -2.11
ACTN1P12814 SNORD53B-201ENST00000577887 78 ntBASIC1.88□□□□□ -2.11
ACTN1P12814 AC069114.2-201ENST00000604699 304 ntBASIC1.88□□□□□ -2.11
ACTN1P12814 AC007485.1-201ENST00000616755 206 ntBASIC1.88□□□□□ -2.11
ACTN1P12814 AL160413.1-201ENST00000622780 310 ntBASIC1.88□□□□□ -2.11
ACTN1P12814 AL391987.6-201ENST00000305671 199 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.87□□□□□ -2.11
ACTN1P12814 Y_RNA.39-201ENST00000362620 98 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 RNU6-1264P-201ENST00000383891 107 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 RNA5SP100-201ENST00000410903 110 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 RNA5SP59-201ENST00000410922 110 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.87□□□□□ -2.11
ACTN1P12814 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.87□□□□□ -2.11
ACTN1P12814 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
ACTN1P12814 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 AC009474.2-201ENST00000451383 136 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 AC010409.1-201ENST00000487382 476 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 HMGN1P13-201ENST00000505795 138 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 RNU6-1146P-201ENST00000516282 102 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 CYCSP23-201ENST00000519781 313 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.87□□□□□ -2.11
ACTN1P12814 AC024614.2-201ENST00000577584 372 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 VN1R91P-201ENST00000594377 169 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.87□□□□□ -2.11
ACTN1P12814 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 RNU6-961P-201ENST00000363893 105 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 Y_RNA.252-201ENST00000364556 101 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 Y_RNA.445-201ENST00000384168 102 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 Y_RNA.460-201ENST00000384255 102 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 RNY1P14-201ENST00000384426 108 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 RNA5SP323-201ENST00000391094 133 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 RNU6-1186P-201ENST00000410429 97 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.86□□□□□ -2.11
ACTN1P12814 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.86□□□□□ -2.11
ACTN1P12814 AC010469.2-201ENST00000496412 480 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.86□□□□□ -2.11
ACTN1P12814 AC074133.1-201ENST00000515696 183 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 RNU4-77P-201ENST00000516692 156 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 SNORA31.17-201ENST00000516953 127 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 AC023442.1-201ENST00000531247 422 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 HSBP1P1-201ENST00000555205 166 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 SUB1P4-201ENST00000566062 339 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 MIR3122-201ENST00000577243 73 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.86□□□□□ -2.11
ACTN1P12814 uc_338.22-201ENST00000622722 187 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 AC091925.1-201ENST00000623204 462 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 U6.92-201ENST00000636464 89 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.86□□□□□ -2.11
ACTN1P12814 Y_RNA.31-201ENST00000362574 102 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 Y_RNA.327-201ENST00000365201 102 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 RNY3P4-201ENST00000384428 101 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 SNORD78.2-201ENST00000391076 69 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 RNA5SP475-201ENST00000410568 110 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 RNU2-7P-201ENST00000410794 178 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 AC004965.1-201ENST00000413033 213 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 CST2P1-201ENST00000425770 87 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 MTND1P14-201ENST00000427400 950 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 AC245047.4-201ENST00000433189 144 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.85□□□□□ -2.11
ACTN1P12814 SNORD65B-201ENST00000459126 73 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 RPL36AP21-201ENST00000490372 323 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 RNA5SP445-201ENST00000515889 115 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 AC023157.2-201ENST00000540596 141 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 AC084364.2-201ENST00000546924 395 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 MIR4659A-201ENST00000580269 81 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 MIR3618-201ENST00000580330 88 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 MIR5188-201ENST00000583467 113 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 SNORD58B-201ENST00000607313 66 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 AL353149.1-201ENST00000610667 244 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 MIR3674-201ENST00000636576 68 ntBASIC1.85□□□□□ -2.11
ACTN1P12814 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ACTN1P12814 RNU6-112P-201ENST00000363599 104 ntBASIC1.84□□□□□ -2.11
ACTN1P12814 RNU6-439P-201ENST00000384188 106 ntBASIC1.84□□□□□ -2.11
ACTN1P12814 AC018865.2-201ENST00000423631 129 ntBASIC1.84□□□□□ -2.11
ACTN1P12814 AL160004.2-201ENST00000432935 350 ntBASIC1.84□□□□□ -2.11
ACTN1P12814 AC005002.2-201ENST00000438228 269 ntBASIC1.84□□□□□ -2.11
ACTN1P12814 FCF1P4-201ENST00000448326 183 ntBASIC1.84□□□□□ -2.11
ACTN1P12814 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.84□□□□□ -2.11
ACTN1P12814 AC055872.1-201ENST00000570978 278 ntBASIC1.84□□□□□ -2.11
ACTN1P12814 AL606534.2-204ENST00000635008 178 ntBASIC1.84□□□□□ -2.11
ACTN1P12814 Y_RNA.138-201ENST00000363462 102 ntBASIC1.83□□□□□ -2.12
ACTN1P12814 SNORD42.2-201ENST00000365570 69 ntBASIC1.83□□□□□ -2.12
ACTN1P12814 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.83□□□□□ -2.12
ACTN1P12814 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.83□□□□□ -2.12
ACTN1P12814 AL137792.2-201ENST00000443484 235 ntBASIC1.83□□□□□ -2.12
ACTN1P12814 snoU13.18-201ENST00000459483 104 ntBASIC1.83□□□□□ -2.12
ACTN1P12814 RPS27P22-201ENST00000478056 241 ntBASIC1.83□□□□□ -2.12
ACTN1P12814 RNA5SP437-201ENST00000517249 129 ntBASIC1.83□□□□□ -2.12
ACTN1P12814 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ACTN1P12814 AC022254.1-201ENST00000567857 235 ntBASIC1.83□□□□□ -2.12
ACTN1P12814 MIR4713-201ENST00000582691 75 ntBASIC1.83□□□□□ -2.12
ACTN1P12814 AC010615.1-201ENST00000594254 1764 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ACTN1P12814 AC091812.1-201ENST00000432235 1948 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.82□□□□□ -2.12
ACTN1P12814 Y_RNA.27-201ENST00000362540 103 ntBASIC1.82□□□□□ -2.12
ACTN1P12814 RNU6-454P-201ENST00000364292 107 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms