Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 AL603910.2-201ENST00000407268 136 ntBASIC2.57□□□□□ -2
RARBP10826 U3.40-201ENST00000408706 208 ntBASIC2.57□□□□□ -2
RARBP10826 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
RARBP10826 MIR3145-201ENST00000580727 82 ntBASIC2.57□□□□□ -2
RARBP10826 AC005357.1-201ENST00000588399 301 ntBASIC2.57□□□□□ -2
RARBP10826 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.57□□□□□ -2
RARBP10826 AL353997.5-201ENST00000618886 171 ntBASIC2.57□□□□□ -2
RARBP10826 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.57□□□□□ -2
RARBP10826 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.57□□□□□ -2
RARBP10826 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RARBP10826 SNORD115-30-201ENST00000364117 82 ntBASIC2.56□□□□□ -2
RARBP10826 RNU6-1318P-201ENST00000365389 103 ntBASIC2.56□□□□□ -2
RARBP10826 SNORA64-201ENST00000384674 134 ntBASIC2.56□□□□□ -2
RARBP10826 MTCO1P5-201ENST00000433573 344 ntBASIC2.56□□□□□ -2
RARBP10826 RPS15AP28-201ENST00000435088 386 ntBASIC2.56□□□□□ -2
RARBP10826 RPL23AP42-201ENST00000471152 471 ntBASIC2.56□□□□□ -2
RARBP10826 AC093259.1-201ENST00000509755 300 ntBASIC2.56□□□□□ -2
RARBP10826 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.56□□□□□ -2
RARBP10826 RNU6-948P-201ENST00000516374 107 ntBASIC2.56□□□□□ -2
RARBP10826 RNA5SP82-201ENST00000516707 92 ntBASIC2.56□□□□□ -2
RARBP10826 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.56□□□□□ -2
RARBP10826 MIR5194-201ENST00000582634 120 ntBASIC2.56□□□□□ -2
RARBP10826 DEFB117-201ENST00000602356 141 ntBASIC2.56□□□□□ -2
RARBP10826 U6.115-201ENST00000636045 103 ntBASIC2.56□□□□□ -2
RARBP10826 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.56□□□□□ -2
RARBP10826 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
RARBP10826 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.56□□□□□ -2
RARBP10826 Y_RNA.44-201ENST00000362676 108 ntBASIC2.55□□□□□ -2
RARBP10826 RNU4-80P-201ENST00000363200 141 ntBASIC2.55□□□□□ -2
RARBP10826 Y_RNA.243-201ENST00000364481 109 ntBASIC2.55□□□□□ -2
RARBP10826 Y_RNA.277-201ENST00000364754 102 ntBASIC2.55□□□□□ -2
RARBP10826 Y_RNA.329-201ENST00000365209 107 ntBASIC2.55□□□□□ -2
RARBP10826 Y_RNA.332-201ENST00000365271 113 ntBASIC2.55□□□□□ -2
RARBP10826 RNU1-52P-201ENST00000384190 164 ntBASIC2.55□□□□□ -2
RARBP10826 RNU6-1235P-201ENST00000384559 107 ntBASIC2.55□□□□□ -2
RARBP10826 AL031003.1-201ENST00000404229 172 ntBASIC2.55□□□□□ -2
RARBP10826 AC123900.1-201ENST00000420390 96 ntBASIC2.55□□□□□ -2
RARBP10826 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.55□□□□□ -2
RARBP10826 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.55□□□□□ -2
RARBP10826 RNU6-498P-201ENST00000459468 107 ntBASIC2.55□□□□□ -2
RARBP10826 RNU6-221P-201ENST00000459541 99 ntBASIC2.55□□□□□ -2
RARBP10826 AC010531.2-201ENST00000465012 153 ntBASIC2.55□□□□□ -2
RARBP10826 AC091959.1-201ENST00000495857 238 ntBASIC2.55□□□□□ -2
RARBP10826 RNU6-436P-201ENST00000516171 114 ntBASIC2.55□□□□□ -2
RARBP10826 NDUFA5P6-201ENST00000542110 379 ntBASIC2.55□□□□□ -2
RARBP10826 AC078938.1-201ENST00000620993 318 ntBASIC2.55□□□□□ -2
RARBP10826 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RARBP10826 AC092881.1-201ENST00000638218 2733 ntBASIC2.54□□□□□ -2
RARBP10826 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RARBP10826 Y_RNA.20-201ENST00000362479 113 ntBASIC2.54□□□□□ -2
RARBP10826 RNU1-148P-201ENST00000384472 162 ntBASIC2.54□□□□□ -2
RARBP10826 MIR221-201ENST00000385135 110 ntBASIC2.54□□□□□ -2
RARBP10826 SNORA11.4-201ENST00000408823 129 ntBASIC2.54□□□□□ -2
RARBP10826 PRELID3BP1-201ENST00000457142 540 ntBASIC2.54□□□□□ -2
RARBP10826 RNU2-34P-201ENST00000516534 121 ntBASIC2.54□□□□□ -2
RARBP10826 RNU1-104P-201ENST00000517280 175 ntBASIC2.54□□□□□ -2
RARBP10826 RPL21P9-201ENST00000556149 474 ntBASIC2.54□□□□□ -2
RARBP10826 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.54□□□□□ -2
RARBP10826 MIR219B-201ENST00000637023 88 ntBASIC2.54□□□□□ -2
RARBP10826 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.54□□□□□ -2
RARBP10826 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
RARBP10826 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.53□□□□□ -2
RARBP10826 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.53□□□□□ -2
RARBP10826 RNU6-847P-201ENST00000411115 108 ntBASIC2.53□□□□□ -2
RARBP10826 AC108059.2-201ENST00000434626 151 ntBASIC2.53□□□□□ -2
RARBP10826 MTCO1P44-201ENST00000441935 243 ntBASIC2.53□□□□□ -2
RARBP10826 AL139109.1-201ENST00000455491 297 ntBASIC2.53□□□□□ -2
RARBP10826 SNORA4.4-201ENST00000515921 135 ntBASIC2.53□□□□□ -2
RARBP10826 MIR3126-201ENST00000577443 74 ntBASIC2.53□□□□□ -2
RARBP10826 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.53□□□□□ -2
RARBP10826 AL512605.2-201ENST00000592972 256 ntBASIC2.53□□□□□ -2
RARBP10826 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.53□□□□□ -2
RARBP10826 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
RARBP10826 AC009487.4-201ENST00000624969 3585 ntBASIC2.52□□□□□ -2.01
RARBP10826 Y_RNA.539-201ENST00000384635 107 ntBASIC2.52□□□□□ -2.01
RARBP10826 Y_RNA.552-201ENST00000384665 112 ntBASIC2.52□□□□□ -2.01
RARBP10826 SRIP3-201ENST00000413200 219 ntBASIC2.52□□□□□ -2.01
RARBP10826 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.52□□□□□ -2.01
RARBP10826 AC018634.1-201ENST00000437554 401 ntBASIC2.52□□□□□ -2.01
RARBP10826 HMGN2P23-201ENST00000456759 269 ntBASIC2.52□□□□□ -2.01
RARBP10826 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RARBP10826 RNA5SP458-201ENST00000516188 119 ntBASIC2.52□□□□□ -2.01
RARBP10826 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
RARBP10826 RNU6-111P-201ENST00000517179 105 ntBASIC2.52□□□□□ -2.01
RARBP10826 AC026271.5-201ENST00000577873 130 ntBASIC2.52□□□□□ -2.01
RARBP10826 MIR3684-201ENST00000579779 74 ntBASIC2.52□□□□□ -2.01
RARBP10826 AC005828.6-201ENST00000606610 232 ntBASIC2.52□□□□□ -2.01
RARBP10826 BX284668.6-201ENST00000606899 438 ntBASIC2.52□□□□□ -2.01
RARBP10826 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.52□□□□□ -2.01
RARBP10826 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.51□□□□□ -2.01
RARBP10826 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
RARBP10826 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
RARBP10826 SNORA67.1-201ENST00000364749 141 ntBASIC2.51□□□□□ -2.01
RARBP10826 SNORA67.3-201ENST00000384366 140 ntBASIC2.51□□□□□ -2.01
RARBP10826 AC008134.1-201ENST00000420943 193 ntBASIC2.51□□□□□ -2.01
RARBP10826 AC024067.1-201ENST00000426199 223 ntBASIC2.51□□□□□ -2.01
RARBP10826 AL357134.1-201ENST00000445848 426 ntBASIC2.51□□□□□ -2.01
RARBP10826 SUMO1P2-201ENST00000452524 304 ntBASIC2.51□□□□□ -2.01
RARBP10826 RNU6-191P-201ENST00000516295 94 ntBASIC2.51□□□□□ -2.01
RARBP10826 AC025647.1-201ENST00000517879 253 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms