Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 7SK.7-201ENST00000603504 247 ntBASIC0.75□□□□□ -2.29
CD28P10747 AC211469.2-201ENST00000605461 205 ntBASIC0.75□□□□□ -2.29
CD28P10747 BX284668.6-201ENST00000606899 438 ntBASIC0.75□□□□□ -2.29
CD28P10747 AC068647.2-201ENST00000637380 353 ntBASIC0.75□□□□□ -2.29
CD28P10747 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
CD28P10747 MIR410-201ENST00000362222 80 ntBASIC0.74□□□□□ -2.29
CD28P10747 RNU6-842P-201ENST00000384269 107 ntBASIC0.74□□□□□ -2.29
CD28P10747 RNU6-831P-201ENST00000384548 107 ntBASIC0.74□□□□□ -2.29
CD28P10747 SNORD41-201ENST00000386967 70 ntBASIC0.74□□□□□ -2.29
CD28P10747 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.74□□□□□ -2.29
CD28P10747 USMG5P1-201ENST00000425964 177 ntBASIC0.74□□□□□ -2.29
CD28P10747 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.74□□□□□ -2.29
CD28P10747 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.74□□□□□ -2.29
CD28P10747 CYCSP23-201ENST00000519781 313 ntBASIC0.74□□□□□ -2.29
CD28P10747 MIR4698-201ENST00000577795 80 ntBASIC0.74□□□□□ -2.29
CD28P10747 AC091178.2-201ENST00000584401 117 ntBASIC0.74□□□□□ -2.29
CD28P10747 AC080013.6-201ENST00000606185 215 ntBASIC0.74□□□□□ -2.29
CD28P10747 SNORA28-201ENST00000606769 126 ntBASIC0.74□□□□□ -2.29
CD28P10747 GHRLOS.1-201ENST00000610995 70 ntBASIC0.74□□□□□ -2.29
CD28P10747 SNORD3E-202ENST00000627253 216 ntBASIC0.74□□□□□ -2.29
CD28P10747 MIR6079-201ENST00000635807 62 ntBASIC0.74□□□□□ -2.29
CD28P10747 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.74□□□□□ -2.29
CD28P10747 Y_RNA.89-201ENST00000363031 102 ntBASIC0.73□□□□□ -2.29
CD28P10747 RNU4-76P-201ENST00000364509 141 ntBASIC0.73□□□□□ -2.29
CD28P10747 Y_RNA.301-201ENST00000364990 103 ntBASIC0.73□□□□□ -2.29
CD28P10747 Y_RNA.354-201ENST00000365448 111 ntBASIC0.73□□□□□ -2.29
CD28P10747 Y_RNA.450-201ENST00000384198 113 ntBASIC0.73□□□□□ -2.29
CD28P10747 RNU6-424P-201ENST00000384367 105 ntBASIC0.73□□□□□ -2.29
CD28P10747 MIR532-201ENST00000385025 91 ntBASIC0.73□□□□□ -2.29
CD28P10747 SNORD12-201ENST00000391002 90 ntBASIC0.73□□□□□ -2.29
CD28P10747 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
CD28P10747 AL355796.1-201ENST00000406706 323 ntBASIC0.73□□□□□ -2.29
CD28P10747 EIF1P2-201ENST00000428233 350 ntBASIC0.73□□□□□ -2.29
CD28P10747 USP9YP30-201ENST00000430729 455 ntBASIC0.73□□□□□ -2.29
CD28P10747 MTND2P22-201ENST00000444325 1033 ntBASIC0.73□□□□□ -2.29
CD28P10747 AC093534.1-201ENST00000504977 132 ntBASIC0.73□□□□□ -2.29
CD28P10747 AC046134.1-201ENST00000514454 666 ntBASIC0.73□□□□□ -2.29
CD28P10747 RN7SKP49-201ENST00000516675 260 ntBASIC0.73□□□□□ -2.29
CD28P10747 RNU6-566P-201ENST00000516790 107 ntBASIC0.73□□□□□ -2.29
CD28P10747 AC090049.2-201ENST00000550377 109 ntBASIC0.73□□□□□ -2.29
CD28P10747 AL121579.1-201ENST00000555129 305 ntBASIC0.73□□□□□ -2.29
CD28P10747 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.73□□□□□ -2.29
CD28P10747 AC125232.2-201ENST00000592457 143 ntBASIC0.73□□□□□ -2.29
CD28P10747 AC103810.9-201ENST00000606688 112 ntBASIC0.73□□□□□ -2.29
CD28P10747 AC100812.1-201ENST00000607622 580 ntBASIC0.73□□□□□ -2.29
CD28P10747 AL021879.1-201ENST00000611756 288 ntBASIC0.73□□□□□ -2.29
CD28P10747 RNU4-79P-201ENST00000362764 141 ntBASIC0.72□□□□□ -2.29
CD28P10747 RNU6-1264P-201ENST00000383891 107 ntBASIC0.72□□□□□ -2.29
CD28P10747 SNORA20B-201ENST00000384220 132 ntBASIC0.72□□□□□ -2.29
CD28P10747 Y_RNA.554-201ENST00000384672 102 ntBASIC0.72□□□□□ -2.29
CD28P10747 MIR562-201ENST00000384894 95 ntBASIC0.72□□□□□ -2.29
CD28P10747 MIR329-1-201ENST00000385028 80 ntBASIC0.72□□□□□ -2.29
CD28P10747 ELOCP21-201ENST00000412558 336 ntBASIC0.72□□□□□ -2.29
CD28P10747 USP9YP16-201ENST00000430287 407 ntBASIC0.72□□□□□ -2.29
CD28P10747 DLGAP5P1-201ENST00000430307 464 ntBASIC0.72□□□□□ -2.29
CD28P10747 AC245047.7-201ENST00000440265 293 ntBASIC0.72□□□□□ -2.29
CD28P10747 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.72□□□□□ -2.29
CD28P10747 USP9YP23-201ENST00000455085 407 ntBASIC0.72□□□□□ -2.29
CD28P10747 AC010469.2-201ENST00000496412 480 ntBASIC0.72□□□□□ -2.29
CD28P10747 OR9P1P-201ENST00000496431 281 ntBASIC0.72□□□□□ -2.29
CD28P10747 SNORA31.4-201ENST00000516049 129 ntBASIC0.72□□□□□ -2.29
CD28P10747 RNU6-720P-201ENST00000516363 108 ntBASIC0.72□□□□□ -2.29
CD28P10747 RNU7-28P-201ENST00000516759 62 ntBASIC0.72□□□□□ -2.29
CD28P10747 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.72□□□□□ -2.29
CD28P10747 AC090617.3-201ENST00000573670 475 ntBASIC0.72□□□□□ -2.29
CD28P10747 MIR4273-201ENST00000582824 84 ntBASIC0.72□□□□□ -2.29
CD28P10747 AC005828.6-201ENST00000606610 232 ntBASIC0.72□□□□□ -2.29
CD28P10747 MIR6857-201ENST00000613267 93 ntBASIC0.72□□□□□ -2.29
CD28P10747 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
CD28P10747 RNU6-222P-201ENST00000362438 107 ntBASIC0.71□□□□□ -2.3
CD28P10747 RNU6-199P-201ENST00000362954 107 ntBASIC0.71□□□□□ -2.3
CD28P10747 RNU6-1059P-201ENST00000363752 98 ntBASIC0.71□□□□□ -2.3
CD28P10747 RNU6-1013P-201ENST00000384180 107 ntBASIC0.71□□□□□ -2.3
CD28P10747 RNU6-1145P-201ENST00000384246 107 ntBASIC0.71□□□□□ -2.3
CD28P10747 Y_RNA.466-201ENST00000384294 113 ntBASIC0.71□□□□□ -2.3
CD28P10747 RNU5A-5P-201ENST00000411054 116 ntBASIC0.71□□□□□ -2.3
CD28P10747 RNU6-1001P-201ENST00000411265 100 ntBASIC0.71□□□□□ -2.3
CD28P10747 AC009161.1-201ENST00000417306 376 ntBASIC0.71□□□□□ -2.3
CD28P10747 STAG3L5P-204ENST00000443759 179 ntBASIC0.71□□□□□ -2.3
CD28P10747 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.71□□□□□ -2.3
CD28P10747 RPS27P22-201ENST00000478056 241 ntBASIC0.71□□□□□ -2.3
CD28P10747 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.71□□□□□ -2.3
CD28P10747 AC105758.1-201ENST00000506038 399 ntBASIC0.71□□□□□ -2.3
CD28P10747 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.71□□□□□ -2.3
CD28P10747 SNORA31.2-201ENST00000516019 134 ntBASIC0.71□□□□□ -2.3
CD28P10747 RNA5SP168-201ENST00000516642 112 ntBASIC0.71□□□□□ -2.3
CD28P10747 RNU6-922P-201ENST00000516753 99 ntBASIC0.71□□□□□ -2.3
CD28P10747 Y_RNA.706-201ENST00000516933 99 ntBASIC0.71□□□□□ -2.3
CD28P10747 RNU6-341P-201ENST00000516973 96 ntBASIC0.71□□□□□ -2.3
CD28P10747 AC105029.1-201ENST00000520250 669 ntBASIC0.71□□□□□ -2.3
CD28P10747 AC023157.2-201ENST00000540596 141 ntBASIC0.71□□□□□ -2.3
CD28P10747 AC093023.1-201ENST00000547375 507 ntBASIC0.71□□□□□ -2.3
CD28P10747 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.71□□□□□ -2.3
CD28P10747 U4.5-201ENST00000617137 123 ntBASIC0.71□□□□□ -2.3
CD28P10747 AC012676.2-201ENST00000619258 186 ntBASIC0.71□□□□□ -2.3
CD28P10747 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.71□□□□□ -2.3
CD28P10747 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CD28P10747 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CD28P10747 MIRLET7C-201ENST00000362160 84 ntBASIC0.7□□□□□ -2.3
CD28P10747 SNORA27.1-201ENST00000362604 124 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms