Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-1.21□□□□□ -2.6
HMGN1P05114 AC091133.4-201ENST00000511142 308 ntBASIC-1.21□□□□□ -2.6
HMGN1P05114 RNU2-60P-201ENST00000517290 128 ntBASIC-1.21□□□□□ -2.6
HMGN1P05114 HIF1AP1-201ENST00000553642 175 ntBASIC-1.21□□□□□ -2.6
HMGN1P05114 MIR4307-201ENST00000582802 84 ntBASIC-1.21□□□□□ -2.6
HMGN1P05114 AC008608.1-201ENST00000603910 127 ntBASIC-1.21□□□□□ -2.6
HMGN1P05114 AC006504.8-201ENST00000621046 635 ntBASIC-1.21□□□□□ -2.6
HMGN1P05114 AL162726.3-218ENST00000636401 95 ntBASIC-1.21□□□□□ -2.6
HMGN1P05114 SNORD38B-202ENST00000625943 69 ntBASIC-1.22□□□□□ -2.6
HMGN1P05114 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.22□□□□□ -2.6
HMGN1P05114 SCARNA4-201ENST00000629045 128 ntBASIC-1.22□□□□□ -2.6
HMGN1P05114 MTND4P9-201ENST00000507819 1346 ntBASIC-1.22□□□□□ -2.61
HMGN1P05114 RNA5SP98-201ENST00000363158 137 ntBASIC-1.23□□□□□ -2.61
HMGN1P05114 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.23□□□□□ -2.61
HMGN1P05114 SNORD45.3-201ENST00000363836 72 ntBASIC-1.23□□□□□ -2.61
HMGN1P05114 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.23□□□□□ -2.61
HMGN1P05114 RNU7-102P-201ENST00000458948 62 ntBASIC-1.23□□□□□ -2.61
HMGN1P05114 RNU6-180P-201ENST00000516697 61 ntBASIC-1.23□□□□□ -2.61
HMGN1P05114 AL358944.1-201ENST00000528537 144 ntBASIC-1.23□□□□□ -2.61
HMGN1P05114 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-1.23□□□□□ -2.61
HMGN1P05114 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.23□□□□□ -2.61
HMGN1P05114 MIR4263-201ENST00000584745 83 ntBASIC-1.23□□□□□ -2.61
HMGN1P05114 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.24□□□□□ -2.61
HMGN1P05114 SNORA25.7-201ENST00000364375 127 ntBASIC-1.24□□□□□ -2.61
HMGN1P05114 RNU6-1184P-201ENST00000384588 108 ntBASIC-1.24□□□□□ -2.61
HMGN1P05114 RNU6-205P-201ENST00000390858 107 ntBASIC-1.24□□□□□ -2.61
HMGN1P05114 SNORA26-201ENST00000391286 122 ntBASIC-1.24□□□□□ -2.61
HMGN1P05114 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.24□□□□□ -2.61
HMGN1P05114 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC-1.24□□□□□ -2.61
HMGN1P05114 SNORD65B-201ENST00000459126 73 ntBASIC-1.24□□□□□ -2.61
HMGN1P05114 RNU6-897P-201ENST00000517135 105 ntBASIC-1.24□□□□□ -2.61
HMGN1P05114 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-1.24□□□□□ -2.61
HMGN1P05114 AC117470.1-201ENST00000381974 330 ntBASIC-1.25□□□□□ -2.61
HMGN1P05114 RNU2-54P-201ENST00000410299 190 ntBASIC-1.25□□□□□ -2.61
HMGN1P05114 AL512326.2-201ENST00000426359 151 ntBASIC-1.25□□□□□ -2.61
HMGN1P05114 RPL22P17-201ENST00000438729 315 ntBASIC-1.25□□□□□ -2.61
HMGN1P05114 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.25□□□□□ -2.61
HMGN1P05114 RNU6-1178P-201ENST00000516674 107 ntBASIC-1.25□□□□□ -2.61
HMGN1P05114 RNU6-323P-201ENST00000521915 107 ntBASIC-1.25□□□□□ -2.61
HMGN1P05114 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-1.25□□□□□ -2.61
HMGN1P05114 Pinc.1-201ENST00000616452 154 ntBASIC-1.25□□□□□ -2.61
HMGN1P05114 RNU6-715P-201ENST00000365204 103 ntBASIC-1.26□□□□□ -2.61
HMGN1P05114 Y_RNA.480-201ENST00000384364 102 ntBASIC-1.26□□□□□ -2.61
HMGN1P05114 Y_RNA.576-201ENST00000384781 102 ntBASIC-1.26□□□□□ -2.61
HMGN1P05114 MIR604-201ENST00000384880 94 ntBASIC-1.26□□□□□ -2.61
HMGN1P05114 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.26□□□□□ -2.61
HMGN1P05114 RNU6-735P-201ENST00000410612 107 ntBASIC-1.26□□□□□ -2.61
HMGN1P05114 AC133104.1-201ENST00000429100 218 ntBASIC-1.26□□□□□ -2.61
HMGN1P05114 AC119618.1-201ENST00000434191 222 ntBASIC-1.26□□□□□ -2.61
HMGN1P05114 MTCO2P29-201ENST00000465212 189 ntBASIC-1.26□□□□□ -2.61
HMGN1P05114 AC079140.5-201ENST00000507882 310 ntBASIC-1.26□□□□□ -2.61
HMGN1P05114 RNU6-448P-201ENST00000517052 107 ntBASIC-1.26□□□□□ -2.61
HMGN1P05114 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.26□□□□□ -2.61
HMGN1P05114 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.26□□□□□ -2.61
HMGN1P05114 MIR7111-201ENST00000619751 72 ntBASIC-1.26□□□□□ -2.61
HMGN1P05114 RNU4-21P-201ENST00000362802 126 ntBASIC-1.27□□□□□ -2.61
HMGN1P05114 RNU6-376P-201ENST00000384731 106 ntBASIC-1.27□□□□□ -2.61
HMGN1P05114 MTCO2P33-201ENST00000402100 465 ntBASIC-1.27□□□□□ -2.61
HMGN1P05114 MTCYBP36-201ENST00000404146 440 ntBASIC-1.27□□□□□ -2.61
HMGN1P05114 AL353572.1-201ENST00000442490 417 ntBASIC-1.27□□□□□ -2.61
HMGN1P05114 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-1.27□□□□□ -2.61
HMGN1P05114 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-1.27□□□□□ -2.61
HMGN1P05114 uc_338.28-201ENST00000612082 187 ntBASIC-1.27□□□□□ -2.61
HMGN1P05114 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-1.28□□□□□ -2.61
HMGN1P05114 SNORD68-201ENST00000363214 84 ntBASIC-1.28□□□□□ -2.61
HMGN1P05114 RNU6-433P-201ENST00000363216 104 ntBASIC-1.28□□□□□ -2.61
HMGN1P05114 RNU6-1126P-201ENST00000384002 107 ntBASIC-1.28□□□□□ -2.61
HMGN1P05114 MIR802-201ENST00000390235 94 ntBASIC-1.28□□□□□ -2.61
HMGN1P05114 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.28□□□□□ -2.61
HMGN1P05114 POLR2KP2-201ENST00000438155 177 ntBASIC-1.28□□□□□ -2.61
HMGN1P05114 RNU6-1037P-201ENST00000459571 107 ntBASIC-1.28□□□□□ -2.61
HMGN1P05114 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-1.28□□□□□ -2.61
HMGN1P05114 MIR4264-201ENST00000583520 66 ntBASIC-1.28□□□□□ -2.61
HMGN1P05114 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.28□□□□□ -2.61
HMGN1P05114 AC139792.3-201ENST00000623525 224 ntBASIC-1.28□□□□□ -2.61
HMGN1P05114 RNU4-73P-201ENST00000363164 141 ntBASIC-1.29□□□□□ -2.62
HMGN1P05114 RNU6-413P-201ENST00000384115 107 ntBASIC-1.29□□□□□ -2.62
HMGN1P05114 AL022718.1-201ENST00000412004 84 ntBASIC-1.29□□□□□ -2.62
HMGN1P05114 MTND2P3-201ENST00000452458 470 ntBASIC-1.29□□□□□ -2.62
HMGN1P05114 AC137590.2-201ENST00000619709 240 ntBASIC-1.29□□□□□ -2.62
HMGN1P05114 MIR224-201ENST00000384889 81 ntBASIC-1.3□□□□□ -2.62
HMGN1P05114 RN7SKP142-201ENST00000411236 328 ntBASIC-1.3□□□□□ -2.62
HMGN1P05114 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.3□□□□□ -2.62
HMGN1P05114 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-1.3□□□□□ -2.62
HMGN1P05114 AC010598.1-201ENST00000510378 103 ntBASIC-1.3□□□□□ -2.62
HMGN1P05114 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.3□□□□□ -2.62
HMGN1P05114 MTND1P8-201ENST00000571424 950 ntBASIC-1.3□□□□□ -2.62
HMGN1P05114 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-1.3□□□□□ -2.62
HMGN1P05114 MIR3152-201ENST00000579801 74 ntBASIC-1.3□□□□□ -2.62
HMGN1P05114 AC022306.3-201ENST00000619930 550 ntBASIC-1.3□□□□□ -2.62
HMGN1P05114 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.31□□□□□ -2.62
HMGN1P05114 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.31□□□□□ -2.62
HMGN1P05114 MIR4636-201ENST00000582271 80 ntBASIC-1.31□□□□□ -2.62
HMGN1P05114 MIR4436A-201ENST00000585278 85 ntBASIC-1.31□□□□□ -2.62
HMGN1P05114 FAM157A-202ENST00000615155 405 ntBASIC-1.31□□□□□ -2.62
HMGN1P05114 AC010608.3-201ENST00000625048 527 ntBASIC-1.31□□□□□ -2.62
HMGN1P05114 MIR6828-201ENST00000636181 60 ntBASIC-1.31□□□□□ -2.62
HMGN1P05114 AC091948.2-201ENST00000636510 279 ntBASIC-1.31□□□□□ -2.62
HMGN1P05114 SNORD114-14-201ENST00000362723 75 ntBASIC-1.32□□□□□ -2.62
HMGN1P05114 SNORD87-201ENST00000364849 89 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms