Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 Y_RNA.124-201ENST00000363339 93 ntBASIC2.95□□□□□ -1.94
CHGBP05060 snoU2_19.4-201ENST00000364329 80 ntBASIC2.95□□□□□ -1.94
CHGBP05060 Y_RNA.343-201ENST00000365354 112 ntBASIC2.95□□□□□ -1.94
CHGBP05060 RNU6-381P-201ENST00000391259 108 ntBASIC2.95□□□□□ -1.94
CHGBP05060 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHGBP05060 RNA5SP492-201ENST00000411330 114 ntBASIC2.95□□□□□ -1.94
CHGBP05060 HSPE1P21-201ENST00000438283 308 ntBASIC2.95□□□□□ -1.94
CHGBP05060 AC245047.8-201ENST00000456455 284 ntBASIC2.95□□□□□ -1.94
CHGBP05060 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.95□□□□□ -1.94
CHGBP05060 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.95□□□□□ -1.94
CHGBP05060 SNORD116-25-201ENST00000516517 92 ntBASIC2.95□□□□□ -1.94
CHGBP05060 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.95□□□□□ -1.94
CHGBP05060 MIR7515-201ENST00000637837 67 ntBASIC2.95□□□□□ -1.94
CHGBP05060 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
CHGBP05060 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CHGBP05060 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
CHGBP05060 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.94□□□□□ -1.94
CHGBP05060 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHGBP05060 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.94□□□□□ -1.94
CHGBP05060 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHGBP05060 Y_RNA.121-201ENST00000363309 113 ntBASIC2.94□□□□□ -1.94
CHGBP05060 Y_RNA.172-201ENST00000363765 102 ntBASIC2.94□□□□□ -1.94
CHGBP05060 RNA5SP456-201ENST00000364002 114 ntBASIC2.94□□□□□ -1.94
CHGBP05060 SNORD32B-201ENST00000364460 84 ntBASIC2.94□□□□□ -1.94
CHGBP05060 RNU6-312P-201ENST00000364629 107 ntBASIC2.94□□□□□ -1.94
CHGBP05060 RNA5SP126-201ENST00000365092 109 ntBASIC2.94□□□□□ -1.94
CHGBP05060 RNU6-969P-201ENST00000383900 105 ntBASIC2.94□□□□□ -1.94
CHGBP05060 Y_RNA.488-201ENST00000384403 102 ntBASIC2.94□□□□□ -1.94
CHGBP05060 Y_RNA.497-201ENST00000384447 98 ntBASIC2.94□□□□□ -1.94
CHGBP05060 SNORA8.3-201ENST00000384679 139 ntBASIC2.94□□□□□ -1.94
CHGBP05060 RNU6-131P-201ENST00000391144 107 ntBASIC2.94□□□□□ -1.94
CHGBP05060 RNU6-1328P-201ENST00000410938 106 ntBASIC2.94□□□□□ -1.94
CHGBP05060 RNU7-141P-201ENST00000459304 62 ntBASIC2.94□□□□□ -1.94
CHGBP05060 HMGN2P9-201ENST00000476875 229 ntBASIC2.94□□□□□ -1.94
CHGBP05060 RNA5SP112-201ENST00000515937 99 ntBASIC2.94□□□□□ -1.94
CHGBP05060 RNU6-453P-201ENST00000516819 85 ntBASIC2.94□□□□□ -1.94
CHGBP05060 SCARNA11.3-201ENST00000517276 130 ntBASIC2.94□□□□□ -1.94
CHGBP05060 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.94□□□□□ -1.94
CHGBP05060 AC008873.1-201ENST00000625051 138 ntBASIC2.94□□□□□ -1.94
CHGBP05060 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.94□□□□□ -1.94
CHGBP05060 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.94□□□□□ -1.94
CHGBP05060 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CHGBP05060 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CHGBP05060 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CHGBP05060 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CHGBP05060 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CHGBP05060 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHGBP05060 MIR21-201ENST00000362134 72 ntBASIC2.93□□□□□ -1.94
CHGBP05060 Y_RNA.23-201ENST00000362496 106 ntBASIC2.93□□□□□ -1.94
CHGBP05060 Y_RNA.75-201ENST00000362927 97 ntBASIC2.93□□□□□ -1.94
CHGBP05060 RNU6-1205P-201ENST00000363625 106 ntBASIC2.93□□□□□ -1.94
CHGBP05060 RNU6-899P-201ENST00000363947 107 ntBASIC2.93□□□□□ -1.94
CHGBP05060 RNU6-944P-201ENST00000364023 107 ntBASIC2.93□□□□□ -1.94
CHGBP05060 RNU4-84P-201ENST00000364200 139 ntBASIC2.93□□□□□ -1.94
CHGBP05060 RNU6-1274P-201ENST00000384557 107 ntBASIC2.93□□□□□ -1.94
CHGBP05060 MIR218-1-201ENST00000384999 110 ntBASIC2.93□□□□□ -1.94
CHGBP05060 Y_RNA.580-201ENST00000391004 95 ntBASIC2.93□□□□□ -1.94
CHGBP05060 AL139095.1-201ENST00000404326 391 ntBASIC2.93□□□□□ -1.94
CHGBP05060 MIR1294-201ENST00000408503 142 ntBASIC2.93□□□□□ -1.94
CHGBP05060 AC092427.1-202ENST00000430569 476 ntBASIC2.93□□□□□ -1.94
CHGBP05060 CR769767.1-201ENST00000436337 346 ntBASIC2.93□□□□□ -1.94
CHGBP05060 AC016717.1-201ENST00000448918 286 ntBASIC2.93□□□□□ -1.94
CHGBP05060 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.93□□□□□ -1.94
CHGBP05060 RNU7-57P-201ENST00000459540 60 ntBASIC2.93□□□□□ -1.94
CHGBP05060 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.93□□□□□ -1.94
CHGBP05060 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.93□□□□□ -1.94
CHGBP05060 MIR4744-201ENST00000581563 82 ntBASIC2.93□□□□□ -1.94
CHGBP05060 AC025754.2-201ENST00000606491 432 ntBASIC2.93□□□□□ -1.94
CHGBP05060 Y_RNA.802-201ENST00000614892 130 ntBASIC2.93□□□□□ -1.94
CHGBP05060 AL078604.3-201ENST00000615580 211 ntBASIC2.93□□□□□ -1.94
CHGBP05060 U4.3-201ENST00000621047 82 ntBASIC2.93□□□□□ -1.94
CHGBP05060 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.92□□□□□ -1.94
CHGBP05060 Y_RNA.215-201ENST00000364204 112 ntBASIC2.92□□□□□ -1.94
CHGBP05060 RNU6-275P-201ENST00000364910 107 ntBASIC2.92□□□□□ -1.94
CHGBP05060 Y_RNA.310-201ENST00000365063 113 ntBASIC2.92□□□□□ -1.94
CHGBP05060 Y_RNA.368-201ENST00000365547 113 ntBASIC2.92□□□□□ -1.94
CHGBP05060 Y_RNA.400-201ENST00000383963 111 ntBASIC2.92□□□□□ -1.94
CHGBP05060 MIR626-201ENST00000385032 94 ntBASIC2.92□□□□□ -1.94
CHGBP05060 MIR586-201ENST00000385035 97 ntBASIC2.92□□□□□ -1.94
CHGBP05060 MIR29B2-201ENST00000385055 81 ntBASIC2.92□□□□□ -1.94
CHGBP05060 AL359511.1-201ENST00000402970 211 ntBASIC2.92□□□□□ -1.94
CHGBP05060 MIR1185-2-201ENST00000408687 86 ntBASIC2.92□□□□□ -1.94
CHGBP05060 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.92□□□□□ -1.94
CHGBP05060 SCARNA8-201ENST00000515924 131 ntBASIC2.92□□□□□ -1.94
CHGBP05060 SNORA70.12-201ENST00000516084 153 ntBASIC2.92□□□□□ -1.94
CHGBP05060 RN7SKP164-201ENST00000516138 266 ntBASIC2.92□□□□□ -1.94
CHGBP05060 RNU6-965P-201ENST00000516721 96 ntBASIC2.92□□□□□ -1.94
CHGBP05060 MIR4753-201ENST00000585119 83 ntBASIC2.92□□□□□ -1.94
CHGBP05060 AL713866.2-201ENST00000603579 219 ntBASIC2.92□□□□□ -1.94
CHGBP05060 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.92□□□□□ -1.94
CHGBP05060 AC068647.2-201ENST00000637380 353 ntBASIC2.92□□□□□ -1.94
CHGBP05060 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CHGBP05060 SNORD50.2-201ENST00000365465 70 ntBASIC2.91□□□□□ -1.94
CHGBP05060 MT-TT-201ENST00000387460 66 ntBASIC2.91□□□□□ -1.94
CHGBP05060 RNU6-578P-201ENST00000390980 103 ntBASIC2.91□□□□□ -1.94
CHGBP05060 MIR1283-1-201ENST00000408494 87 ntBASIC2.91□□□□□ -1.94
CHGBP05060 AL137159.1-201ENST00000452808 512 ntBASIC2.91□□□□□ -1.94
CHGBP05060 AC117454.1-201ENST00000491120 168 ntBASIC2.91□□□□□ -1.94
CHGBP05060 AC026436.1-201ENST00000510537 270 ntBASIC2.91□□□□□ -1.94
CHGBP05060 RNU6-426P-201ENST00000516464 97 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms