Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 RNU2-7P-201ENST00000410794 178 ntBASIC1.28□□□□□ -2.2
MMP1P03956 RNU6-498P-201ENST00000459468 107 ntBASIC1.28□□□□□ -2.2
MMP1P03956 RNU7-57P-201ENST00000459540 60 ntBASIC1.28□□□□□ -2.2
MMP1P03956 RPS26P55-201ENST00000471178 356 ntBASIC1.28□□□□□ -2.2
MMP1P03956 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.28□□□□□ -2.2
MMP1P03956 AC093303.1-201ENST00000514549 295 ntBASIC1.28□□□□□ -2.2
MMP1P03956 Y_RNA.706-201ENST00000516933 99 ntBASIC1.28□□□□□ -2.2
MMP1P03956 FRG2DP-202ENST00000566967 323 ntBASIC1.28□□□□□ -2.2
MMP1P03956 MIR5695-201ENST00000579717 85 ntBASIC1.28□□□□□ -2.2
MMP1P03956 7SK.7-201ENST00000603504 247 ntBASIC1.28□□□□□ -2.2
MMP1P03956 SNORD11B-201ENST00000607707 90 ntBASIC1.28□□□□□ -2.2
MMP1P03956 PISRT1.1-201ENST00000616930 107 ntBASIC1.28□□□□□ -2.2
MMP1P03956 SNORA33-201ENST00000363664 130 ntBASIC1.27□□□□□ -2.21
MMP1P03956 Y_RNA.364-201ENST00000365532 101 ntBASIC1.27□□□□□ -2.21
MMP1P03956 RNU6-890P-201ENST00000384121 107 ntBASIC1.27□□□□□ -2.21
MMP1P03956 RNU6-793P-201ENST00000384233 104 ntBASIC1.27□□□□□ -2.21
MMP1P03956 Y_RNA.557-201ENST00000384680 107 ntBASIC1.27□□□□□ -2.21
MMP1P03956 MIR329-1-201ENST00000385028 80 ntBASIC1.27□□□□□ -2.21
MMP1P03956 SNORA75.6-201ENST00000391318 127 ntBASIC1.27□□□□□ -2.21
MMP1P03956 MIR320B2-201ENST00000408479 138 ntBASIC1.27□□□□□ -2.21
MMP1P03956 MIR548J-201ENST00000408833 112 ntBASIC1.27□□□□□ -2.21
MMP1P03956 RNU6-955P-201ENST00000410497 104 ntBASIC1.27□□□□□ -2.21
MMP1P03956 RNU6-1001P-201ENST00000411265 100 ntBASIC1.27□□□□□ -2.21
MMP1P03956 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.27□□□□□ -2.21
MMP1P03956 USP9YP16-201ENST00000430287 407 ntBASIC1.27□□□□□ -2.21
MMP1P03956 USP9YP23-201ENST00000455085 407 ntBASIC1.27□□□□□ -2.21
MMP1P03956 RPL17P19-201ENST00000489069 552 ntBASIC1.27□□□□□ -2.21
MMP1P03956 FGF7P4-201ENST00000509595 295 ntBASIC1.27□□□□□ -2.21
MMP1P03956 AC011406.1-201ENST00000512440 370 ntBASIC1.27□□□□□ -2.21
MMP1P03956 RNU6-559P-201ENST00000516151 98 ntBASIC1.27□□□□□ -2.21
MMP1P03956 RNU6-948P-201ENST00000516374 107 ntBASIC1.27□□□□□ -2.21
MMP1P03956 RNU6-902P-201ENST00000517212 91 ntBASIC1.27□□□□□ -2.21
MMP1P03956 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
MMP1P03956 AL357075.2-201ENST00000614906 189 ntBASIC1.27□□□□□ -2.21
MMP1P03956 MIR6779-201ENST00000617283 64 ntBASIC1.27□□□□□ -2.21
MMP1P03956 AL078596.1-201ENST00000624856 447 ntBASIC1.27□□□□□ -2.21
MMP1P03956 MTND4LP32-201ENST00000636111 270 ntBASIC1.27□□□□□ -2.21
MMP1P03956 ICE2P2-201ENST00000483823 2787 ntBASIC1.27□□□□□ -2.21
MMP1P03956 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
MMP1P03956 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.26□□□□□ -2.21
MMP1P03956 AC100821.1-201ENST00000523153 2479 ntBASIC1.26□□□□□ -2.21
MMP1P03956 RNA5SP361-201ENST00000362686 118 ntBASIC1.26□□□□□ -2.21
MMP1P03956 RNU6-280P-201ENST00000364145 104 ntBASIC1.26□□□□□ -2.21
MMP1P03956 RNU6-99P-201ENST00000364721 107 ntBASIC1.26□□□□□ -2.21
MMP1P03956 SNORD1A-201ENST00000364968 72 ntBASIC1.26□□□□□ -2.21
MMP1P03956 RNU6-342P-201ENST00000384521 104 ntBASIC1.26□□□□□ -2.21
MMP1P03956 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
MMP1P03956 RNU6-57P-201ENST00000411348 103 ntBASIC1.26□□□□□ -2.21
MMP1P03956 MTCYBP10-201ENST00000424905 650 ntBASIC1.26□□□□□ -2.21
MMP1P03956 CST2P1-201ENST00000425770 87 ntBASIC1.26□□□□□ -2.21
MMP1P03956 AC069257.2-201ENST00000441819 155 ntBASIC1.26□□□□□ -2.21
MMP1P03956 MTND5P20-201ENST00000448677 143 ntBASIC1.26□□□□□ -2.21
MMP1P03956 RNU6-221P-201ENST00000459541 99 ntBASIC1.26□□□□□ -2.21
MMP1P03956 AC025647.1-201ENST00000517879 253 ntBASIC1.26□□□□□ -2.21
MMP1P03956 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.26□□□□□ -2.21
MMP1P03956 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.26□□□□□ -2.21
MMP1P03956 AC093023.1-201ENST00000547375 507 ntBASIC1.26□□□□□ -2.21
MMP1P03956 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.26□□□□□ -2.21
MMP1P03956 AC004584.2-201ENST00000570407 410 ntBASIC1.26□□□□□ -2.21
MMP1P03956 AC090617.3-201ENST00000573670 475 ntBASIC1.26□□□□□ -2.21
MMP1P03956 AC005899.2-201ENST00000584353 90 ntBASIC1.26□□□□□ -2.21
MMP1P03956 AC010999.1-201ENST00000611856 324 ntBASIC1.26□□□□□ -2.21
MMP1P03956 MIR1244-1-201ENST00000612829 85 ntBASIC1.26□□□□□ -2.21
MMP1P03956 AC104260.1-201ENST00000616660 539 ntBASIC1.26□□□□□ -2.21
MMP1P03956 AC087588.2-201ENST00000617667 426 ntBASIC1.26□□□□□ -2.21
MMP1P03956 AC126177.8-201ENST00000618339 1015 ntBASIC1.26□□□□□ -2.21
MMP1P03956 snoZ196.1-201ENST00000625269 89 ntBASIC1.26□□□□□ -2.21
MMP1P03956 MIR1244-3-201ENST00000635744 85 ntBASIC1.26□□□□□ -2.21
MMP1P03956 MIR338-201ENST00000636369 67 ntBASIC1.26□□□□□ -2.21
MMP1P03956 MIR1244-2-201ENST00000636449 85 ntBASIC1.26□□□□□ -2.21
MMP1P03956 MIR1244-4-202ENST00000636813 85 ntBASIC1.26□□□□□ -2.21
MMP1P03956 MIR1302-1-201ENST00000637932 143 ntBASIC1.26□□□□□ -2.21
MMP1P03956 U3.8-201ENST00000363675 217 ntBASIC1.25□□□□□ -2.21
MMP1P03956 Y_RNA.179-201ENST00000363844 90 ntBASIC1.25□□□□□ -2.21
MMP1P03956 Y_RNA.287-201ENST00000364853 94 ntBASIC1.25□□□□□ -2.21
MMP1P03956 RNU6-318P-201ENST00000384283 103 ntBASIC1.25□□□□□ -2.21
MMP1P03956 Y_RNA.529-201ENST00000384586 119 ntBASIC1.25□□□□□ -2.21
MMP1P03956 MIR598-201ENST00000384868 97 ntBASIC1.25□□□□□ -2.21
MMP1P03956 RNU6-700P-201ENST00000391043 107 ntBASIC1.25□□□□□ -2.21
MMP1P03956 MIR1185-2-201ENST00000408687 86 ntBASIC1.25□□□□□ -2.21
MMP1P03956 AL161935.2-201ENST00000414627 60 ntBASIC1.25□□□□□ -2.21
MMP1P03956 HMGN2P34-201ENST00000437647 269 ntBASIC1.25□□□□□ -2.21
MMP1P03956 MTATP6P23-201ENST00000440153 476 ntBASIC1.25□□□□□ -2.21
MMP1P03956 NDUFB4P10-201ENST00000452541 359 ntBASIC1.25□□□□□ -2.21
MMP1P03956 AC114982.1-201ENST00000469402 321 ntBASIC1.25□□□□□ -2.21
MMP1P03956 AC092991.1-201ENST00000477176 376 ntBASIC1.25□□□□□ -2.21
MMP1P03956 AC087343.1-201ENST00000477341 475 ntBASIC1.25□□□□□ -2.21
MMP1P03956 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.25□□□□□ -2.21
MMP1P03956 AC091144.1-201ENST00000519573 138 ntBASIC1.25□□□□□ -2.21
MMP1P03956 AC093027.1-201ENST00000546698 429 ntBASIC1.25□□□□□ -2.21
MMP1P03956 AL355375.2-201ENST00000574825 175 ntBASIC1.25□□□□□ -2.21
MMP1P03956 MIR4295-201ENST00000585286 85 ntBASIC1.25□□□□□ -2.21
MMP1P03956 AP001485.1-201ENST00000604799 199 ntBASIC1.25□□□□□ -2.21
MMP1P03956 AC025253.1-201ENST00000613623 543 ntBASIC1.25□□□□□ -2.21
MMP1P03956 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.25□□□□□ -2.21
MMP1P03956 MIR8063-201ENST00000621930 81 ntBASIC1.25□□□□□ -2.21
MMP1P03956 AC006001.4-201ENST00000622243 395 ntBASIC1.25□□□□□ -2.21
MMP1P03956 AC095038.3-201ENST00000634439 195 ntBASIC1.25□□□□□ -2.21
MMP1P03956 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
MMP1P03956 Y_RNA.263-201ENST00000364659 114 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms