Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.65□□□□□ -2.31
TRBV12-3P01733 AP002004.2-201ENST00000531656 154 ntBASIC0.65□□□□□ -2.31
TRBV12-3P01733 AC091178.2-201ENST00000584401 117 ntBASIC0.65□□□□□ -2.31
TRBV12-3P01733 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.65□□□□□ -2.31
TRBV12-3P01733 ZNF299P-201ENST00000406845 1804 ntBASIC0.65□□□□□ -2.31
TRBV12-3P01733 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.65□□□□□ -2.31
TRBV12-3P01733 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TRBV12-3P01733 Y_RNA.38-201ENST00000362617 102 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 Y_RNA.51-201ENST00000362725 102 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 RNU6-595P-201ENST00000363944 107 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 Y_RNA.267-201ENST00000364679 109 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 RNU6-306P-201ENST00000384617 107 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 RNA5SP482-201ENST00000391269 118 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 RNU1-139P-201ENST00000391307 165 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 RNU2-16P-201ENST00000410712 136 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 RNU2-64P-201ENST00000411315 191 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 MTND3P23-201ENST00000431980 347 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 AC091021.1-201ENST00000468051 388 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 RPS26P48-201ENST00000491713 339 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 AC046134.1-201ENST00000514454 666 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 AC090142.3-201ENST00000519012 385 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.64□□□□□ -2.31
TRBV12-3P01733 AP002001.1-203ENST00000534002 267 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 FAM106DP-201ENST00000586416 501 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 MIR6857-201ENST00000613267 93 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 MIR6504-201ENST00000613520 61 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 AC022079.1-201ENST00000621546 602 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.64□□□□□ -2.31
TRBV12-3P01733 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 AC008163.1-202ENST00000636004 2889 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TRBV12-3P01733 AC005592.1-201ENST00000566527 1640 ntBASIC0.64□□□□□ -2.31
TRBV12-3P01733 SNORA1B-201ENST00000362535 133 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 SNORD114-2-201ENST00000363953 78 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 RNU6-969P-201ENST00000383900 105 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 MIR608-201ENST00000384820 100 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.63□□□□□ -2.31
TRBV12-3P01733 USP9YP16-201ENST00000430287 407 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.63□□□□□ -2.31
TRBV12-3P01733 USP9YP23-201ENST00000455085 407 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 LINC01399-202ENST00000458450 244 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 RPS29P1-201ENST00000465274 159 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.63□□□□□ -2.31
TRBV12-3P01733 RNA5SP20-201ENST00000515976 84 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 Y_RNA.706-201ENST00000516933 99 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 AC011604.1-201ENST00000545978 196 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 AC093023.1-201ENST00000547375 507 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.63□□□□□ -2.31
TRBV12-3P01733 AC013244.2-201ENST00000603396 103 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 AC100812.1-201ENST00000607622 580 ntBASIC0.63□□□□□ -2.31
TRBV12-3P01733 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRBV12-3P01733 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
TRBV12-3P01733 Y_RNA.191-201ENST00000363972 113 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 RNU6-407P-201ENST00000365280 104 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 RNU6-1264P-201ENST00000383891 107 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 RNU6-376P-201ENST00000384731 106 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 MIR942-201ENST00000401111 86 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 RNU6-373P-201ENST00000411247 98 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 AC018865.2-201ENST00000423631 129 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 AC104332.1-201ENST00000440471 797 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 MTND1P29-201ENST00000448112 647 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV12-3P01733 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV12-3P01733 AC018710.1-201ENST00000506509 158 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 PSMC1P5-201ENST00000512850 177 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 RNU6-197P-201ENST00000516680 100 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.62□□□□□ -2.31
TRBV12-3P01733 DEFB108E-201ENST00000524692 240 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 AC090617.3-201ENST00000573670 475 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 MIR4452-201ENST00000583004 71 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 MIR4653-201ENST00000585107 83 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 AL117336.2-201ENST00000602435 335 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 PRELID3BP2-201ENST00000605362 201 ntBASIC0.62□□□□□ -2.31
TRBV12-3P01733 SNORA27.1-201ENST00000362604 124 ntBASIC0.61□□□□□ -2.31
TRBV12-3P01733 Y_RNA.238-201ENST00000364441 102 ntBASIC0.61□□□□□ -2.31
TRBV12-3P01733 MIR499A-201ENST00000384903 122 ntBASIC0.61□□□□□ -2.31
TRBV12-3P01733 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.61□□□□□ -2.31
TRBV12-3P01733 RNU7-90P-201ENST00000459216 62 ntBASIC0.61□□□□□ -2.31
TRBV12-3P01733 RNU7-21P-201ENST00000459430 62 ntBASIC0.61□□□□□ -2.31
TRBV12-3P01733 RNU6-351P-201ENST00000516097 100 ntBASIC0.61□□□□□ -2.31
TRBV12-3P01733 RNU6-1278P-201ENST00000516130 107 ntBASIC0.61□□□□□ -2.31
TRBV12-3P01733 AC136628.3-201ENST00000521868 290 ntBASIC0.61□□□□□ -2.31
TRBV12-3P01733 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.61□□□□□ -2.31
TRBV12-3P01733 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.61□□□□□ -2.31
TRBV12-3P01733 MIR3942-201ENST00000585264 109 ntBASIC0.61□□□□□ -2.31
TRBV12-3P01733 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.61□□□□□ -2.31
TRBV12-3P01733 AC004832.4-201ENST00000608952 331 ntBASIC0.61□□□□□ -2.31
TRBV12-3P01733 AC024614.3-201ENST00000637860 256 ntBASIC0.61□□□□□ -2.31
TRBV12-3P01733 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
TRBV12-3P01733 AC073544.1-201ENST00000600110 1595 ntBASIC0.61□□□□□ -2.31
TRBV12-3P01733 MIRLET7C-201ENST00000362160 84 ntBASIC0.6□□□□□ -2.31
TRBV12-3P01733 RNU6-222P-201ENST00000362438 107 ntBASIC0.6□□□□□ -2.31
TRBV12-3P01733 Y_RNA.106-201ENST00000363189 100 ntBASIC0.6□□□□□ -2.31
TRBV12-3P01733 MIR146A-201ENST00000385201 99 ntBASIC0.6□□□□□ -2.31
TRBV12-3P01733 AC006461.1-201ENST00000412637 326 ntBASIC0.6□□□□□ -2.31
TRBV12-3P01733 RPS3AP1-201ENST00000413190 320 ntBASIC0.6□□□□□ -2.31
TRBV12-3P01733 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.6□□□□□ -2.31
TRBV12-3P01733 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.6□□□□□ -2.31
TRBV12-3P01733 UQCRBP2-201ENST00000447827 297 ntBASIC0.6□□□□□ -2.31
TRBV12-3P01733 AL049830.1-201ENST00000468034 425 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms