Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.12□□□□□ -2.07
LDLRP01130 AC107393.1-201ENST00000512403 346 ntBASIC2.12□□□□□ -2.07
LDLRP01130 Y_RNA.674-201ENST00000516362 113 ntBASIC2.12□□□□□ -2.07
LDLRP01130 RNU6-966P-201ENST00000516479 104 ntBASIC2.12□□□□□ -2.07
LDLRP01130 RNU5F-4P-201ENST00000516581 114 ntBASIC2.12□□□□□ -2.07
LDLRP01130 RNU6-1098P-201ENST00000516772 96 ntBASIC2.12□□□□□ -2.07
LDLRP01130 RNU6-255P-201ENST00000516957 105 ntBASIC2.12□□□□□ -2.07
LDLRP01130 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
LDLRP01130 AC022202.1-201ENST00000613515 211 ntBASIC2.12□□□□□ -2.07
LDLRP01130 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.12□□□□□ -2.07
LDLRP01130 AL357075.2-201ENST00000614906 189 ntBASIC2.12□□□□□ -2.07
LDLRP01130 AC005296.1-201ENST00000616145 209 ntBASIC2.12□□□□□ -2.07
LDLRP01130 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
LDLRP01130 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.12□□□□□ -2.07
LDLRP01130 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
LDLRP01130 AC092881.1-201ENST00000638218 2733 ntBASIC2.11□□□□□ -2.07
LDLRP01130 AL157777.2-201ENST00000258070 137 ntBASIC2.11□□□□□ -2.07
LDLRP01130 RNU4-90P-201ENST00000362773 141 ntBASIC2.11□□□□□ -2.07
LDLRP01130 Y_RNA.83-201ENST00000363005 113 ntBASIC2.11□□□□□ -2.07
LDLRP01130 RNU6-774P-201ENST00000363238 107 ntBASIC2.11□□□□□ -2.07
LDLRP01130 SNORD115-8-201ENST00000363856 82 ntBASIC2.11□□□□□ -2.07
LDLRP01130 Y_RNA.199-201ENST00000364014 102 ntBASIC2.11□□□□□ -2.07
LDLRP01130 RNU6-740P-201ENST00000364734 105 ntBASIC2.11□□□□□ -2.07
LDLRP01130 SNORD115-38-201ENST00000365037 82 ntBASIC2.11□□□□□ -2.07
LDLRP01130 RNU6-234P-201ENST00000365229 104 ntBASIC2.11□□□□□ -2.07
LDLRP01130 RNY4P28-201ENST00000365281 93 ntBASIC2.11□□□□□ -2.07
LDLRP01130 RNU1-148P-201ENST00000384472 162 ntBASIC2.11□□□□□ -2.07
LDLRP01130 RNU6-493P-201ENST00000391321 108 ntBASIC2.11□□□□□ -2.07
LDLRP01130 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.11□□□□□ -2.07
LDLRP01130 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.11□□□□□ -2.07
LDLRP01130 RN7SKP49-201ENST00000516675 260 ntBASIC2.11□□□□□ -2.07
LDLRP01130 RNU2-44P-201ENST00000516795 194 ntBASIC2.11□□□□□ -2.07
LDLRP01130 DEFB131C-201ENST00000528817 165 ntBASIC2.11□□□□□ -2.07
LDLRP01130 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.11□□□□□ -2.07
LDLRP01130 AK6P2-201ENST00000549020 471 ntBASIC2.11□□□□□ -2.07
LDLRP01130 AC055872.1-201ENST00000570978 278 ntBASIC2.11□□□□□ -2.07
LDLRP01130 MIR3126-201ENST00000577443 74 ntBASIC2.11□□□□□ -2.07
LDLRP01130 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.11□□□□□ -2.07
LDLRP01130 MIR5695-201ENST00000579717 85 ntBASIC2.11□□□□□ -2.07
LDLRP01130 MIR5006-201ENST00000583027 110 ntBASIC2.11□□□□□ -2.07
LDLRP01130 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.11□□□□□ -2.07
LDLRP01130 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.11□□□□□ -2.07
LDLRP01130 U2.22-201ENST00000636441 106 ntBASIC2.11□□□□□ -2.07
LDLRP01130 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
LDLRP01130 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LDLRP01130 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LDLRP01130 AL356292.1-201ENST00000283110 373 ntBASIC2.1□□□□□ -2.07
LDLRP01130 MIR411-201ENST00000362239 96 ntBASIC2.1□□□□□ -2.07
LDLRP01130 Y_RNA.44-201ENST00000362676 108 ntBASIC2.1□□□□□ -2.07
LDLRP01130 Y_RNA.122-201ENST00000363331 96 ntBASIC2.1□□□□□ -2.07
LDLRP01130 RNU6-626P-201ENST00000363354 107 ntBASIC2.1□□□□□ -2.07
LDLRP01130 Y_RNA.140-201ENST00000363474 103 ntBASIC2.1□□□□□ -2.07
LDLRP01130 RNU6-326P-201ENST00000365480 107 ntBASIC2.1□□□□□ -2.07
LDLRP01130 RNU6-20P-201ENST00000384106 107 ntBASIC2.1□□□□□ -2.07
LDLRP01130 Y_RNA.570-201ENST00000384750 101 ntBASIC2.1□□□□□ -2.07
LDLRP01130 MIR17-201ENST00000385012 84 ntBASIC2.1□□□□□ -2.07
LDLRP01130 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.1□□□□□ -2.07
LDLRP01130 AC004386.2-201ENST00000441858 148 ntBASIC2.1□□□□□ -2.07
LDLRP01130 AL138752.1-201ENST00000452964 351 ntBASIC2.1□□□□□ -2.07
LDLRP01130 RNU6-717P-201ENST00000459076 104 ntBASIC2.1□□□□□ -2.07
LDLRP01130 RNU7-14P-201ENST00000459331 62 ntBASIC2.1□□□□□ -2.07
LDLRP01130 SEPT14P8-201ENST00000508026 178 ntBASIC2.1□□□□□ -2.07
LDLRP01130 SNORD116-28-201ENST00000516123 91 ntBASIC2.1□□□□□ -2.07
LDLRP01130 MIR5007-201ENST00000583098 95 ntBASIC2.1□□□□□ -2.07
LDLRP01130 AP000942.3-201ENST00000603702 160 ntBASIC2.1□□□□□ -2.07
LDLRP01130 SNORD113-5-201ENST00000607261 78 ntBASIC2.1□□□□□ -2.07
LDLRP01130 AC005562.2-201ENST00000618264 111 ntBASIC2.1□□□□□ -2.07
LDLRP01130 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.1□□□□□ -2.07
LDLRP01130 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LDLRP01130 AC131280.1-202ENST00000624067 4211 ntBASIC2.1□□□□□ -2.07
LDLRP01130 RNU6-137P-201ENST00000363680 108 ntBASIC2.09□□□□□ -2.07
LDLRP01130 RNU6-682P-201ENST00000363843 106 ntBASIC2.09□□□□□ -2.07
LDLRP01130 Y_RNA.270-201ENST00000364693 104 ntBASIC2.09□□□□□ -2.07
LDLRP01130 RNU6-47P-201ENST00000383866 107 ntBASIC2.09□□□□□ -2.07
LDLRP01130 Y_RNA.418-201ENST00000384029 102 ntBASIC2.09□□□□□ -2.07
LDLRP01130 Y_RNA.626-201ENST00000411288 95 ntBASIC2.09□□□□□ -2.07
LDLRP01130 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.09□□□□□ -2.07
LDLRP01130 AC104332.1-201ENST00000440471 797 ntBASIC2.09□□□□□ -2.07
LDLRP01130 AL392103.1-201ENST00000447000 198 ntBASIC2.09□□□□□ -2.07
LDLRP01130 HMGN2P18-201ENST00000450680 270 ntBASIC2.09□□□□□ -2.07
LDLRP01130 RPL23AP3-201ENST00000453844 468 ntBASIC2.09□□□□□ -2.07
LDLRP01130 RNU7-120P-201ENST00000459334 63 ntBASIC2.09□□□□□ -2.07
LDLRP01130 AC007215.1-201ENST00000464893 276 ntBASIC2.09□□□□□ -2.07
LDLRP01130 ATP5EP1-201ENST00000510257 156 ntBASIC2.09□□□□□ -2.07
LDLRP01130 SNORA25.14-201ENST00000516481 132 ntBASIC2.09□□□□□ -2.07
LDLRP01130 Y_RNA.683-201ENST00000516508 93 ntBASIC2.09□□□□□ -2.07
LDLRP01130 RNU6-1198P-201ENST00000516904 67 ntBASIC2.09□□□□□ -2.07
LDLRP01130 RNA5SP490-201ENST00000517141 136 ntBASIC2.09□□□□□ -2.07
LDLRP01130 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.09□□□□□ -2.07
LDLRP01130 AL137100.2-201ENST00000555786 315 ntBASIC2.09□□□□□ -2.07
LDLRP01130 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.09□□□□□ -2.07
LDLRP01130 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.09□□□□□ -2.07
LDLRP01130 SNRPGP20-201ENST00000604477 205 ntBASIC2.09□□□□□ -2.07
LDLRP01130 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.09□□□□□ -2.07
LDLRP01130 SNORD115-3-201ENST00000363100 82 ntBASIC2.08□□□□□ -2.08
LDLRP01130 Y_RNA.292-201ENST00000364904 97 ntBASIC2.08□□□□□ -2.08
LDLRP01130 Y_RNA.464-201ENST00000384282 110 ntBASIC2.08□□□□□ -2.08
LDLRP01130 Y_RNA.569-201ENST00000384749 103 ntBASIC2.08□□□□□ -2.08
LDLRP01130 RNU5A-5P-201ENST00000411054 116 ntBASIC2.08□□□□□ -2.08
LDLRP01130 Y_RNA.793-201ENST00000411222 111 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms