Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 Z99129.1-201ENST00000612510 255 ntBASIC0.55□□□□□ -2.32
UPK1BO75841 AC244015.1-201ENST00000622301 99 ntBASIC0.55□□□□□ -2.32
UPK1BO75841 Y_RNA.135-201ENST00000363439 95 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 RNU4-41P-201ENST00000364426 143 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 Y_RNA.256-201ENST00000364594 104 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 Y_RNA.330-201ENST00000365230 109 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 RNU6-53P-201ENST00000365367 106 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 Y_RNA.530-201ENST00000384587 101 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 RNU6-136P-201ENST00000384663 107 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 RNU6-332P-201ENST00000391193 108 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 RNU11-5P-201ENST00000391216 129 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 RNU6-908P-201ENST00000410160 94 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 RNU6-1001P-201ENST00000411265 100 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.54□□□□□ -2.32
UPK1BO75841 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.54□□□□□ -2.32
UPK1BO75841 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.54□□□□□ -2.32
UPK1BO75841 AL163540.1-201ENST00000485382 386 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 AC019235.1-201ENST00000503847 207 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 AC046134.1-201ENST00000514454 666 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.54□□□□□ -2.32
UPK1BO75841 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 AC023827.1-201ENST00000569247 97 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 AL162413.1-201ENST00000603198 110 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 CASC19-280ENST00000642102 1351 ntBASIC0.54□□□□□ -2.32
UPK1BO75841 SNORA27.1-201ENST00000362604 124 ntBASIC0.53□□□□□ -2.32
UPK1BO75841 Y_RNA.48-201ENST00000362710 103 ntBASIC0.53□□□□□ -2.32
UPK1BO75841 RNU6-1059P-201ENST00000363752 98 ntBASIC0.53□□□□□ -2.32
UPK1BO75841 MIR562-201ENST00000384894 95 ntBASIC0.53□□□□□ -2.32
UPK1BO75841 ZNF885P-201ENST00000420174 1098 ntBASIC0.53□□□□□ -2.32
UPK1BO75841 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.53□□□□□ -2.32
UPK1BO75841 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.53□□□□□ -2.32
UPK1BO75841 AC092473.1-201ENST00000441098 221 ntBASIC0.53□□□□□ -2.32
UPK1BO75841 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.53□□□□□ -2.32
UPK1BO75841 RNU6-1114P-201ENST00000516022 107 ntBASIC0.53□□□□□ -2.32
UPK1BO75841 RNU6-273P-201ENST00000516937 96 ntBASIC0.53□□□□□ -2.32
UPK1BO75841 MIR4524B-201ENST00000581569 115 ntBASIC0.53□□□□□ -2.32
UPK1BO75841 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
UPK1BO75841 AL008636.1-201ENST00000625038 1018 ntBASIC0.53□□□□□ -2.32
UPK1BO75841 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.53□□□□□ -2.32
UPK1BO75841 AC068700.1-201ENST00000565862 3754 ntBASIC0.53□□□□□ -2.33
UPK1BO75841 Y_RNA.38-201ENST00000362617 102 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 Y_RNA.106-201ENST00000363189 100 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 SNORD116-11-201ENST00000383882 92 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
UPK1BO75841 MIR891A-201ENST00000401237 79 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 FGF7P8-201ENST00000402994 292 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 ELOCP21-201ENST00000412558 336 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 PIGPP3-201ENST00000425307 415 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 USP9YP16-201ENST00000430287 407 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 FABP5P4-201ENST00000437203 171 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.52□□□□□ -2.33
UPK1BO75841 AL137792.2-201ENST00000443484 235 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 UQCRBP2-201ENST00000447827 297 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.52□□□□□ -2.33
UPK1BO75841 USP9YP23-201ENST00000455085 407 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 COX6CP6-201ENST00000490840 228 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 MIR3942-201ENST00000585264 109 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 AL357075.2-201ENST00000614906 189 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 AC073544.1-201ENST00000600110 1595 ntBASIC0.52□□□□□ -2.33
UPK1BO75841 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
UPK1BO75841 RNU6-451P-201ENST00000362921 107 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 RNU6-595P-201ENST00000363944 107 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 RNU6-1264P-201ENST00000383891 107 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 Y_RNA.414-201ENST00000384011 101 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 RNU6-163P-201ENST00000384396 106 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 ZNF299P-201ENST00000406845 1804 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.51□□□□□ -2.33
UPK1BO75841 USMG5P1-201ENST00000425964 177 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 PCNPP5-201ENST00000452246 481 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.51□□□□□ -2.33
UPK1BO75841 RNU6-63P-201ENST00000516690 95 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 Y_RNA.706-201ENST00000516933 99 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 RNU6-1096P-201ENST00000517089 102 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 AC022868.1-201ENST00000517767 391 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.51□□□□□ -2.33
UPK1BO75841 AC125232.2-201ENST00000592457 143 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 AC012557.2-201ENST00000605919 418 ntBASIC0.51□□□□□ -2.33
UPK1BO75841 RNA5SP264-201ENST00000363115 107 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 SNORA25.3-201ENST00000363205 127 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 Y_RNA.336-201ENST00000365307 109 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 RNU6-1080P-201ENST00000383982 107 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 SNORD89-201ENST00000390981 114 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 RNU1-139P-201ENST00000391307 165 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 MTCYBP4-201ENST00000401524 249 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 Y_RNA.595-201ENST00000410403 105 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 RNU5A-5P-201ENST00000411054 116 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.5□□□□□ -2.33
UPK1BO75841 AL157398.1-201ENST00000452981 186 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.5□□□□□ -2.33
UPK1BO75841 SNORA70.12-201ENST00000516084 153 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 RNU6-1278P-201ENST00000516130 107 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.5□□□□□ -2.33
UPK1BO75841 AC023442.1-201ENST00000531247 422 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.5□□□□□ -2.33
UPK1BO75841 MIR3973-201ENST00000579824 107 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 AC131055.1-201ENST00000584626 316 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 snoU13.31-201ENST00000607291 104 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 AC127459.3-201ENST00000624328 466 ntBASIC0.5□□□□□ -2.33
UPK1BO75841 U6.115-201ENST00000636045 103 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms