Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 RNU7-87P-201ENST00000459343 62 ntBASIC0.96□□□□□ -2.26
UPK3AO75631 MTND5P5-201ENST00000503764 376 ntBASIC0.96□□□□□ -2.26
UPK3AO75631 SNORA31.4-201ENST00000516049 129 ntBASIC0.96□□□□□ -2.26
UPK3AO75631 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.96□□□□□ -2.26
UPK3AO75631 AC090617.3-201ENST00000573670 475 ntBASIC0.96□□□□□ -2.26
UPK3AO75631 AC136932.1-201ENST00000574771 208 ntBASIC0.96□□□□□ -2.26
UPK3AO75631 MIR4778-201ENST00000577635 80 ntBASIC0.96□□□□□ -2.26
UPK3AO75631 MIR4295-201ENST00000585286 85 ntBASIC0.96□□□□□ -2.26
UPK3AO75631 AL513534.2-201ENST00000603836 250 ntBASIC0.96□□□□□ -2.26
UPK3AO75631 AC090517.2-201ENST00000614966 680 ntBASIC0.96□□□□□ -2.26
UPK3AO75631 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
UPK3AO75631 Y_RNA.2-201ENST00000362330 96 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 RNU6-505P-201ENST00000384427 107 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 SNORD116-4-201ENST00000384733 96 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 MIR190B-201ENST00000401119 79 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 MIR1276-201ENST00000408707 83 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 DYNLT3P2-201ENST00000442517 295 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 AC018710.1-201ENST00000506509 158 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK3AO75631 AC046134.1-201ENST00000514454 666 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 RNU6-922P-201ENST00000516753 99 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 RNU7-172P-201ENST00000517125 64 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.95□□□□□ -2.26
UPK3AO75631 AC125232.2-201ENST00000592457 143 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 AC018462.2-201ENST00000605375 395 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.95□□□□□ -2.26
UPK3AO75631 AC006435.5-201ENST00000624486 112 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 MIR6079-201ENST00000635807 62 ntBASIC0.95□□□□□ -2.26
UPK3AO75631 Y_RNA.86-201ENST00000363020 111 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 Y_RNA.116-201ENST00000363292 103 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 Y_RNA.191-201ENST00000363972 113 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 Y_RNA.224-201ENST00000364308 111 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 RNU4-76P-201ENST00000364509 141 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 RNU6-407P-201ENST00000365280 104 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 MIR660-201ENST00000385235 97 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 RNU6-700P-201ENST00000391043 107 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 MIR548F5-201ENST00000408421 86 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 AL353997.1-201ENST00000432936 108 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 RNU6-329P-201ENST00000459618 107 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 COX6CP14-201ENST00000469580 174 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 AC087343.1-201ENST00000477341 475 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.94□□□□□ -2.26
UPK3AO75631 AC026782.1-201ENST00000512952 449 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 AC097462.1-201ENST00000514125 324 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 RNU6-1016P-201ENST00000516689 94 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK3AO75631 AL121579.1-201ENST00000555129 305 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC0.94□□□□□ -2.26
UPK3AO75631 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 AC018638.8-201ENST00000588755 281 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 SNORD114-21-201ENST00000606412 72 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 AC005014.2-201ENST00000607795 599 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 AL133216.2-202ENST00000634512 349 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.94□□□□□ -2.26
UPK3AO75631 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
UPK3AO75631 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
UPK3AO75631 AC073544.1-201ENST00000600110 1595 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 Y_RNA.122-201ENST00000363331 96 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 RNU6-879P-201ENST00000364328 108 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 Y_RNA.265-201ENST00000364677 108 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 RNU6-1264P-201ENST00000383891 107 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 SNORA20B-201ENST00000384220 132 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 MIR329-1-201ENST00000385028 80 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 RNU11-5P-201ENST00000391216 129 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 AL355796.1-201ENST00000406706 323 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 Y_RNA.594-201ENST00000410373 140 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 AC074085.1-201ENST00000413598 418 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 MTCO3P19-201ENST00000415864 321 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.93□□□□□ -2.26
UPK3AO75631 RAB28P5-201ENST00000427490 651 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 EIF1P2-201ENST00000428233 350 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 RPS3AP52-201ENST00000435639 297 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.93□□□□□ -2.26
UPK3AO75631 RNU6-165P-201ENST00000517170 99 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 RPL21P9-201ENST00000556149 474 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.93□□□□□ -2.26
UPK3AO75631 MIR5701-3-201ENST00000578890 82 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 MIR5701-1-201ENST00000585138 82 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 SNORA28-201ENST00000606769 126 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 AL357075.2-201ENST00000614906 189 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 MIR5701-2-201ENST00000615634 82 ntBASIC0.93□□□□□ -2.26
UPK3AO75631 RNA5SP361-201ENST00000362686 118 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 RNY1P16-201ENST00000363063 111 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 RNU4-40P-201ENST00000364351 143 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 Y_RNA.267-201ENST00000364679 109 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 Y_RNA.364-201ENST00000365532 101 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 Y_RNA.508-201ENST00000384502 114 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 MIR1277-201ENST00000408536 78 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 RNU6-1050P-201ENST00000410388 107 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 AC091021.1-201ENST00000468051 388 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.92□□□□□ -2.26
UPK3AO75631 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.92□□□□□ -2.26
UPK3AO75631 Y_RNA.670-201ENST00000516255 105 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 RNU2-56P-201ENST00000516826 190 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.92□□□□□ -2.26
UPK3AO75631 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 GHRLOS.1-201ENST00000610995 70 ntBASIC0.92□□□□□ -2.26
UPK3AO75631 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.91□□□□□ -2.26
UPK3AO75631 RNU6-874P-201ENST00000362390 105 ntBASIC0.91□□□□□ -2.26
UPK3AO75631 RNU6-199P-201ENST00000362954 107 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms