Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 RNU6-596P-201ENST00000365395 98 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 Y_RNA.405-201ENST00000383979 100 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 Y_RNA.414-201ENST00000384011 101 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 Y_RNA.451-201ENST00000384200 100 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 Y_RNA.524-201ENST00000384564 100 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 Y_RNA.561-201ENST00000384694 100 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 RNU6-332P-201ENST00000391193 108 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.73□□□□□ -2.29
CLDN11O75508 AC114482.1-201ENST00000418010 247 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.73□□□□□ -2.29
CLDN11O75508 AC098826.2-201ENST00000452011 651 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 OR9P1P-201ENST00000496431 281 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.73□□□□□ -2.29
CLDN11O75508 PDCD5P2-201ENST00000507570 312 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 RNU7-12P-201ENST00000516030 62 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 RNU6-341P-201ENST00000516973 96 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 AL121579.1-201ENST00000555129 305 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 MIR3684-201ENST00000579779 74 ntBASIC0.73□□□□□ -2.29
CLDN11O75508 RNU6-451P-201ENST00000362921 107 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 Y_RNA.267-201ENST00000364679 109 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 RNU6-281P-201ENST00000384212 103 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 SNORA20B-201ENST00000384220 132 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 RNY1P14-201ENST00000384426 108 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 Y_RNA.533-201ENST00000384596 114 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 MTCYBP4-201ENST00000401524 249 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.72□□□□□ -2.29
CLDN11O75508 MTND1P1-201ENST00000445453 368 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 AC093850.1-201ENST00000454121 251 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.72□□□□□ -2.29
CLDN11O75508 RNU6-1114P-201ENST00000516022 107 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 RNU6-1223P-201ENST00000517124 104 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 SNORA4-201ENST00000584302 138 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 MIR1321-201ENST00000637766 79 ntBASIC0.72□□□□□ -2.29
CLDN11O75508 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.71□□□□□ -2.3
CLDN11O75508 ZNF299P-201ENST00000406845 1804 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 Y_RNA.38-201ENST00000362617 102 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CLDN11O75508 Y_RNA.490-201ENST00000384413 102 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 RNU1-139P-201ENST00000391307 165 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 RNU2-16P-201ENST00000410712 136 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 RNU2-64P-201ENST00000411315 191 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 AC091021.1-201ENST00000468051 388 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 AC090142.3-201ENST00000519012 385 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 DEFB108E-201ENST00000524692 240 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 AP002004.2-201ENST00000531656 154 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 AP002001.1-203ENST00000534002 267 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 AC133485.1-201ENST00000567176 124 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 AC138907.6-201ENST00000568401 126 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 AL590095.2-201ENST00000604136 117 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.71□□□□□ -2.3
CLDN11O75508 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CLDN11O75508 AC008163.1-202ENST00000636004 2889 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 Y_RNA.51-201ENST00000362725 102 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 RNU6-595P-201ENST00000363944 107 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 SNORD116-1-201ENST00000384335 95 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 RNU6-306P-201ENST00000384617 107 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 RNA5SP482-201ENST00000391269 118 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 USP9YP16-201ENST00000430287 407 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 MTND3P23-201ENST00000431980 347 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.7□□□□□ -2.3
CLDN11O75508 MTCO2P7-201ENST00000446518 666 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 USP9YP23-201ENST00000455085 407 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 LINC01399-202ENST00000458450 244 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.7□□□□□ -2.3
CLDN11O75508 RPS26P48-201ENST00000491713 339 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 AC046134.1-201ENST00000514454 666 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 RNA5SP20-201ENST00000515976 84 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 Y_RNA.706-201ENST00000516933 99 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 AC091178.2-201ENST00000584401 117 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 AC100812.1-201ENST00000607622 580 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 AC022079.1-201ENST00000621546 602 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.7□□□□□ -2.3
CLDN11O75508 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 AC005592.1-201ENST00000566527 1640 ntBASIC0.7□□□□□ -2.3
CLDN11O75508 SNORA1B-201ENST00000362535 133 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 RNU6-969P-201ENST00000383900 105 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 MIR608-201ENST00000384820 100 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 MIR942-201ENST00000401111 86 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.69□□□□□ -2.3
CLDN11O75508 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.69□□□□□ -2.3
CLDN11O75508 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 AC018710.1-201ENST00000506509 158 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 RNU6-197P-201ENST00000516680 100 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 AC093023.1-201ENST00000547375 507 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 AC090617.3-201ENST00000573670 475 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 MIR5000-201ENST00000577717 103 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.69□□□□□ -2.3
CLDN11O75508 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
CLDN11O75508 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CLDN11O75508 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CLDN11O75508 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CLDN11O75508 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CLDN11O75508 RNU6-407P-201ENST00000365280 104 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 RNU6-1264P-201ENST00000383891 107 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 RNU6-42P-201ENST00000384165 107 ntBASIC0.68□□□□□ -2.3
CLDN11O75508 RNU6-376P-201ENST00000384731 106 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 117.1 ms