Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 SNORD23.1-201ENST00000408212 104 ntBASIC1.95□□□□□ -2.1
CACNA1FO60840 RNU6-1001P-201ENST00000411265 100 ntBASIC1.95□□□□□ -2.1
CACNA1FO60840 AIMP1P2-201ENST00000425294 312 ntBASIC1.95□□□□□ -2.1
CACNA1FO60840 CYCSP26-201ENST00000534107 320 ntBASIC1.95□□□□□ -2.1
CACNA1FO60840 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.95□□□□□ -2.1
CACNA1FO60840 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.95□□□□□ -2.1
CACNA1FO60840 AC008749.1-201ENST00000597650 306 ntBASIC1.95□□□□□ -2.1
CACNA1FO60840 AL078605.1-201ENST00000603529 500 ntBASIC1.95□□□□□ -2.1
CACNA1FO60840 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.95□□□□□ -2.1
CACNA1FO60840 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.95□□□□□ -2.1
CACNA1FO60840 RNU6-324P-201ENST00000363957 106 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 Y_RNA.214-201ENST00000364201 112 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 RNA5SP240-201ENST00000365355 128 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 Y_RNA.416-201ENST00000384014 113 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 RNU6-1083P-201ENST00000384022 107 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 SNORD63-201ENST00000384262 68 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 RNU6-937P-201ENST00000384325 106 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 RNU1-57P-201ENST00000384491 166 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 Y_RNA.570-201ENST00000384750 101 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 MIR548I3-201ENST00000408378 149 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 MIR548I1-201ENST00000408810 149 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 RPS26P42-201ENST00000413485 326 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.94□□□□□ -2.1
CACNA1FO60840 AC140059.1-201ENST00000489238 361 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 Y_RNA.683-201ENST00000516508 93 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.94□□□□□ -2.1
CACNA1FO60840 AL109918.3-201ENST00000603072 338 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 AC006380.1-201ENST00000603598 186 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 SNRPGP20-201ENST00000604477 205 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 AL357075.2-201ENST00000614906 189 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
CACNA1FO60840 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.94□□□□□ -2.1
CACNA1FO60840 AL596028.1-201ENST00000326971 197 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 SNORD114-19-201ENST00000363072 75 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 RNU6-290P-201ENST00000365212 101 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 SNORA6-201ENST00000384033 151 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 RNU6-750P-201ENST00000390946 107 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 RNA5SP201-201ENST00000410316 124 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 AP1B1P2-201ENST00000416196 106 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 CYCSP48-201ENST00000417124 323 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 AC019205.3-201ENST00000424573 156 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.94□□□□□ -2.1
CACNA1FO60840 RNU6-58P-201ENST00000517143 103 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 DEFB108E-201ENST00000524692 240 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 AL391813.1-201ENST00000603098 260 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 AL365434.2-201ENST00000607979 234 ntBASIC1.94□□□□□ -2.1
CACNA1FO60840 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.94□□□□□ -2.1
CACNA1FO60840 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.93□□□□□ -2.1
CACNA1FO60840 SNORA72.2-201ENST00000365028 127 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 RNU6-1175P-201ENST00000365200 107 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 RNU6-338P-201ENST00000383888 105 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 RNU6-843P-201ENST00000384454 104 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 AL603910.2-201ENST00000407268 136 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 MIR1287-201ENST00000408492 90 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 MIR548H3-201ENST00000408771 118 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 POLR2KP2-201ENST00000438155 177 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 MRPS10P1-201ENST00000448483 130 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.93□□□□□ -2.1
CACNA1FO60840 snoU13.14-201ENST00000459372 104 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 AP000870.1-201ENST00000472927 406 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 RPS23P5-201ENST00000495419 428 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.93□□□□□ -2.1
CACNA1FO60840 RNU7-110P-201ENST00000516891 62 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 MIR4658-201ENST00000584344 65 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 MIR4781-201ENST00000585250 76 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.93□□□□□ -2.1
CACNA1FO60840 AC005296.1-201ENST00000616145 209 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.93□□□□□ -2.1
CACNA1FO60840 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.93□□□□□ -2.1
CACNA1FO60840 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.93□□□□□ -2.1
CACNA1FO60840 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.93□□□□□ -2.1
CACNA1FO60840 Y_RNA.82-201ENST00000363000 102 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 Y_RNA.92-201ENST00000363043 102 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 RNU6-626P-201ENST00000363354 107 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 Y_RNA.235-201ENST00000364412 102 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 Y_RNA.306-201ENST00000365015 102 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 Y_RNA.308-201ENST00000365043 101 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 Y_RNA.312-201ENST00000365089 102 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 Y_RNA.322-201ENST00000365151 102 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 RNU2-54P-201ENST00000410299 190 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.92□□□□□ -2.1
CACNA1FO60840 AC012306.1-201ENST00000423267 114 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.92□□□□□ -2.1
CACNA1FO60840 AC005042.3-201ENST00000453230 174 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 Y_RNA.650-201ENST00000459002 102 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 RNU6-625P-201ENST00000459412 107 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 SEPT14P8-201ENST00000508026 178 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.92□□□□□ -2.1
CACNA1FO60840 Y_RNA.777-201ENST00000516982 102 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 Y_RNA.771-201ENST00000598668 102 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 Y_RNA.789-201ENST00000622480 102 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
CACNA1FO60840 BX322639.1-202ENST00000423987 2213 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 Z82195.2-201ENST00000612348 18351 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 Y_RNA.20-201ENST00000362479 113 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 AC018448.1-201ENST00000552843 316 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 MIR4765-201ENST00000585007 77 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 AL512605.2-201ENST00000592972 256 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 AC078899.2-201ENST00000595282 212 ntBASIC1.92□□□□□ -2.1
CACNA1FO60840 Z83818.1-201ENST00000603584 150 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms