Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 MIR1253-201ENST00000408273 105 ntBASIC2.33□□□□□ -2.04
RRP9O43818 RNA5SP21-201ENST00000410917 96 ntBASIC2.33□□□□□ -2.04
RRP9O43818 HMGN2P19-201ENST00000425149 265 ntBASIC2.33□□□□□ -2.04
RRP9O43818 MTCO1P5-201ENST00000433573 344 ntBASIC2.33□□□□□ -2.04
RRP9O43818 AL121890.1-201ENST00000435457 205 ntBASIC2.33□□□□□ -2.04
RRP9O43818 RN7SL636P-201ENST00000497504 294 ntBASIC2.33□□□□□ -2.04
RRP9O43818 AC011406.1-201ENST00000512440 370 ntBASIC2.33□□□□□ -2.04
RRP9O43818 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.33□□□□□ -2.04
RRP9O43818 RNU6-1146P-201ENST00000516282 102 ntBASIC2.33□□□□□ -2.04
RRP9O43818 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.33□□□□□ -2.04
RRP9O43818 MIR4287-201ENST00000579398 78 ntBASIC2.33□□□□□ -2.04
RRP9O43818 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.33□□□□□ -2.04
RRP9O43818 U2.14-201ENST00000615943 113 ntBASIC2.33□□□□□ -2.04
RRP9O43818 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.33□□□□□ -2.04
RRP9O43818 AP006437.1-201ENST00000641440 3685 ntBASIC2.33□□□□□ -2.04
RRP9O43818 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RRP9O43818 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RRP9O43818 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RRP9O43818 RNU4-80P-201ENST00000363200 141 ntBASIC2.32□□□□□ -2.04
RRP9O43818 RNU6-23P-201ENST00000363283 107 ntBASIC2.32□□□□□ -2.04
RRP9O43818 RNA5SP493-201ENST00000364115 91 ntBASIC2.32□□□□□ -2.04
RRP9O43818 Y_RNA.352-201ENST00000365439 102 ntBASIC2.32□□□□□ -2.04
RRP9O43818 Y_RNA.447-201ENST00000384184 113 ntBASIC2.32□□□□□ -2.04
RRP9O43818 SNORA40.19-201ENST00000390846 128 ntBASIC2.32□□□□□ -2.04
RRP9O43818 RNU6-1248P-201ENST00000391096 64 ntBASIC2.32□□□□□ -2.04
RRP9O43818 RNU6-710P-201ENST00000410424 105 ntBASIC2.32□□□□□ -2.04
RRP9O43818 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.32□□□□□ -2.04
RRP9O43818 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.32□□□□□ -2.04
RRP9O43818 AL109933.2-201ENST00000452651 260 ntBASIC2.32□□□□□ -2.04
RRP9O43818 AC027419.1-201ENST00000522976 328 ntBASIC2.32□□□□□ -2.04
RRP9O43818 AC110588.1-201ENST00000559699 137 ntBASIC2.32□□□□□ -2.04
RRP9O43818 MIR3200-201ENST00000580767 85 ntBASIC2.32□□□□□ -2.04
RRP9O43818 U2.15-201ENST00000611544 191 ntBASIC2.32□□□□□ -2.04
RRP9O43818 U2.16-201ENST00000613119 191 ntBASIC2.32□□□□□ -2.04
RRP9O43818 U2.12-201ENST00000613778 191 ntBASIC2.32□□□□□ -2.04
RRP9O43818 U2.20-201ENST00000613956 192 ntBASIC2.32□□□□□ -2.04
RRP9O43818 U2.9-201ENST00000615427 191 ntBASIC2.32□□□□□ -2.04
RRP9O43818 U2.11-201ENST00000616345 191 ntBASIC2.32□□□□□ -2.04
RRP9O43818 U2.2-201ENST00000616535 191 ntBASIC2.32□□□□□ -2.04
RRP9O43818 U2.3-201ENST00000617785 191 ntBASIC2.32□□□□□ -2.04
RRP9O43818 U2.19-201ENST00000618602 191 ntBASIC2.32□□□□□ -2.04
RRP9O43818 RNU2-1-201ENST00000618664 191 ntBASIC2.32□□□□□ -2.04
RRP9O43818 U2.6-201ENST00000619225 191 ntBASIC2.32□□□□□ -2.04
RRP9O43818 U2.5-201ENST00000619465 191 ntBASIC2.32□□□□□ -2.04
RRP9O43818 U2.10-201ENST00000620268 191 ntBASIC2.32□□□□□ -2.04
RRP9O43818 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.32□□□□□ -2.04
RRP9O43818 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.31□□□□□ -2.04
RRP9O43818 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RRP9O43818 RNU1-58P-201ENST00000362413 163 ntBASIC2.31□□□□□ -2.04
RRP9O43818 RNU2-61P-201ENST00000411069 191 ntBASIC2.31□□□□□ -2.04
RRP9O43818 EEF1A1P41-201ENST00000414667 207 ntBASIC2.31□□□□□ -2.04
RRP9O43818 HMGN2P34-201ENST00000437647 269 ntBASIC2.31□□□□□ -2.04
RRP9O43818 S100A11P2-201ENST00000467589 312 ntBASIC2.31□□□□□ -2.04
RRP9O43818 AC055731.1-201ENST00000474387 401 ntBASIC2.31□□□□□ -2.04
RRP9O43818 AC091959.1-201ENST00000495857 238 ntBASIC2.31□□□□□ -2.04
RRP9O43818 RNU6-1271P-201ENST00000517049 105 ntBASIC2.31□□□□□ -2.04
RRP9O43818 SUMO2P18-201ENST00000518873 252 ntBASIC2.31□□□□□ -2.04
RRP9O43818 AL512605.2-201ENST00000592972 256 ntBASIC2.31□□□□□ -2.04
RRP9O43818 AL353149.1-201ENST00000610667 244 ntBASIC2.31□□□□□ -2.04
RRP9O43818 MIR6766-201ENST00000622641 72 ntBASIC2.31□□□□□ -2.04
RRP9O43818 Y_RNA.44-201ENST00000362676 108 ntBASIC2.3□□□□□ -2.04
RRP9O43818 snoU2-30.2-201ENST00000362805 70 ntBASIC2.3□□□□□ -2.04
RRP9O43818 Y_RNA.124-201ENST00000363339 93 ntBASIC2.3□□□□□ -2.04
RRP9O43818 RNU6-407P-201ENST00000365280 104 ntBASIC2.3□□□□□ -2.04
RRP9O43818 Y_RNA.478-201ENST00000384358 107 ntBASIC2.3□□□□□ -2.04
RRP9O43818 Y_RNA.489-201ENST00000384410 101 ntBASIC2.3□□□□□ -2.04
RRP9O43818 SNORA48.2-201ENST00000390926 124 ntBASIC2.3□□□□□ -2.04
RRP9O43818 RNA5SP270-201ENST00000411361 118 ntBASIC2.3□□□□□ -2.04
RRP9O43818 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.3□□□□□ -2.04
RRP9O43818 ATP5J2P3-201ENST00000451550 258 ntBASIC2.3□□□□□ -2.04
RRP9O43818 RPS26P55-201ENST00000471178 356 ntBASIC2.3□□□□□ -2.04
RRP9O43818 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.3□□□□□ -2.04
RRP9O43818 RNU6-1041P-201ENST00000516254 102 ntBASIC2.3□□□□□ -2.04
RRP9O43818 RNU6-191P-201ENST00000516295 94 ntBASIC2.3□□□□□ -2.04
RRP9O43818 AL137100.2-201ENST00000555786 315 ntBASIC2.3□□□□□ -2.04
RRP9O43818 RPL21P9-201ENST00000556149 474 ntBASIC2.3□□□□□ -2.04
RRP9O43818 DEFB122-202ENST00000569013 197 ntBASIC2.3□□□□□ -2.04
RRP9O43818 MIR3169-201ENST00000578032 83 ntBASIC2.3□□□□□ -2.04
RRP9O43818 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.3□□□□□ -2.04
RRP9O43818 Y_RNA.416-201ENST00000384014 113 ntBASIC2.29□□□□□ -2.04
RRP9O43818 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.29□□□□□ -2.04
RRP9O43818 RPS27P22-201ENST00000478056 241 ntBASIC2.29□□□□□ -2.04
RRP9O43818 RNA5SP20-201ENST00000515976 84 ntBASIC2.29□□□□□ -2.04
RRP9O43818 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.29□□□□□ -2.04
RRP9O43818 MIR3128-201ENST00000581957 66 ntBASIC2.29□□□□□ -2.04
RRP9O43818 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RRP9O43818 Y_RNA.477-201ENST00000384352 108 ntBASIC2.28□□□□□ -2.04
RRP9O43818 HMGN2P39-201ENST00000398005 273 ntBASIC2.28□□□□□ -2.04
RRP9O43818 AL603910.2-201ENST00000407268 136 ntBASIC2.28□□□□□ -2.04
RRP9O43818 RNU6-855P-201ENST00000410395 104 ntBASIC2.28□□□□□ -2.04
RRP9O43818 BX510359.4-201ENST00000423750 193 ntBASIC2.28□□□□□ -2.04
RRP9O43818 AC010154.1-201ENST00000425857 269 ntBASIC2.28□□□□□ -2.04
RRP9O43818 RNU6-1023P-201ENST00000516137 106 ntBASIC2.28□□□□□ -2.04
RRP9O43818 SNORA27.4-201ENST00000516650 95 ntBASIC2.28□□□□□ -2.04
RRP9O43818 MIR4438-201ENST00000585271 93 ntBASIC2.28□□□□□ -2.04
RRP9O43818 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.28□□□□□ -2.04
RRP9O43818 UBE2WP1-201ENST00000362030 340 ntBASIC2.27□□□□□ -2.05
RRP9O43818 Y_RNA.54-201ENST00000362766 105 ntBASIC2.27□□□□□ -2.05
RRP9O43818 Y_RNA.60-201ENST00000362831 98 ntBASIC2.27□□□□□ -2.05
RRP9O43818 Y_RNA.275-201ENST00000364726 110 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms