Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 RNU6-256P-201ENST00000516747 97 ntBASIC0.63□□□□□ -2.31
RNF13O43567 AL358944.1-201ENST00000528537 144 ntBASIC0.63□□□□□ -2.31
RNF13O43567 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.63□□□□□ -2.31
RNF13O43567 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.63□□□□□ -2.31
RNF13O43567 MIR4781-201ENST00000585250 76 ntBASIC0.63□□□□□ -2.31
RNF13O43567 AL162413.1-201ENST00000603198 110 ntBASIC0.63□□□□□ -2.31
RNF13O43567 AC012557.2-201ENST00000605919 418 ntBASIC0.63□□□□□ -2.31
RNF13O43567 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.63□□□□□ -2.31
RNF13O43567 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.63□□□□□ -2.31
RNF13O43567 SNORA27.1-201ENST00000362604 124 ntBASIC0.62□□□□□ -2.31
RNF13O43567 RNU6-1252P-201ENST00000363054 104 ntBASIC0.62□□□□□ -2.31
RNF13O43567 RNU6-833P-201ENST00000363486 107 ntBASIC0.62□□□□□ -2.31
RNF13O43567 RNU6-259P-201ENST00000383999 107 ntBASIC0.62□□□□□ -2.31
RNF13O43567 Y_RNA.490-201ENST00000384413 102 ntBASIC0.62□□□□□ -2.31
RNF13O43567 Y_RNA.615-201ENST00000410769 117 ntBASIC0.62□□□□□ -2.31
RNF13O43567 AC018865.2-201ENST00000423631 129 ntBASIC0.62□□□□□ -2.31
RNF13O43567 AL035398.1-201ENST00000430869 322 ntBASIC0.62□□□□□ -2.31
RNF13O43567 HMGN2P26-201ENST00000463169 339 ntBASIC0.62□□□□□ -2.31
RNF13O43567 AC117454.1-201ENST00000491120 168 ntBASIC0.62□□□□□ -2.31
RNF13O43567 AC018710.1-201ENST00000506509 158 ntBASIC0.62□□□□□ -2.31
RNF13O43567 AC046134.1-201ENST00000514454 666 ntBASIC0.62□□□□□ -2.31
RNF13O43567 RNA5SP20-201ENST00000515976 84 ntBASIC0.62□□□□□ -2.31
RNF13O43567 RNU6-405P-201ENST00000516637 110 ntBASIC0.62□□□□□ -2.31
RNF13O43567 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.62□□□□□ -2.31
RNF13O43567 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.62□□□□□ -2.31
RNF13O43567 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.62□□□□□ -2.31
RNF13O43567 RNU1-93P-201ENST00000364704 169 ntBASIC0.61□□□□□ -2.31
RNF13O43567 RNU6-596P-201ENST00000365395 98 ntBASIC0.61□□□□□ -2.31
RNF13O43567 RNU6-1264P-201ENST00000383891 107 ntBASIC0.61□□□□□ -2.31
RNF13O43567 RNU6-281P-201ENST00000384212 103 ntBASIC0.61□□□□□ -2.31
RNF13O43567 RNU6-376P-201ENST00000384731 106 ntBASIC0.61□□□□□ -2.31
RNF13O43567 MIR526A1-201ENST00000384897 85 ntBASIC0.61□□□□□ -2.31
RNF13O43567 MIR891A-201ENST00000401237 79 ntBASIC0.61□□□□□ -2.31
RNF13O43567 RNU5A-5P-201ENST00000411054 116 ntBASIC0.61□□□□□ -2.31
RNF13O43567 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.61□□□□□ -2.31
RNF13O43567 USMG5P1-201ENST00000425964 177 ntBASIC0.61□□□□□ -2.31
RNF13O43567 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.61□□□□□ -2.31
RNF13O43567 snoU13.25-201ENST00000458945 104 ntBASIC0.61□□□□□ -2.31
RNF13O43567 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.61□□□□□ -2.31
RNF13O43567 RNU6-1278P-201ENST00000516130 107 ntBASIC0.61□□□□□ -2.31
RNF13O43567 RNU6-1281P-201ENST00000516223 105 ntBASIC0.61□□□□□ -2.31
RNF13O43567 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.61□□□□□ -2.31
RNF13O43567 FAM106DP-201ENST00000586416 501 ntBASIC0.61□□□□□ -2.31
RNF13O43567 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
RNF13O43567 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
RNF13O43567 RNU4-12P-201ENST00000365233 139 ntBASIC0.6□□□□□ -2.31
RNF13O43567 RNU6-407P-201ENST00000365280 104 ntBASIC0.6□□□□□ -2.31
RNF13O43567 Y_RNA.405-201ENST00000383979 100 ntBASIC0.6□□□□□ -2.31
RNF13O43567 Y_RNA.451-201ENST00000384200 100 ntBASIC0.6□□□□□ -2.31
RNF13O43567 Y_RNA.524-201ENST00000384564 100 ntBASIC0.6□□□□□ -2.31
RNF13O43567 Y_RNA.561-201ENST00000384694 100 ntBASIC0.6□□□□□ -2.31
RNF13O43567 MIR520G-201ENST00000385064 90 ntBASIC0.6□□□□□ -2.31
RNF13O43567 AC093019.1-201ENST00000443135 252 ntBASIC0.6□□□□□ -2.31
RNF13O43567 AC098869.1-201ENST00000481627 292 ntBASIC0.6□□□□□ -2.31
RNF13O43567 AC113410.1-201ENST00000505029 247 ntBASIC0.6□□□□□ -2.31
RNF13O43567 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.6□□□□□ -2.31
RNF13O43567 MIR3672-201ENST00000584290 82 ntBASIC0.6□□□□□ -2.31
RNF13O43567 MIR3611-201ENST00000584484 83 ntBASIC0.6□□□□□ -2.31
RNF13O43567 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.6□□□□□ -2.31
RNF13O43567 AC136443.5-201ENST00000603741 370 ntBASIC0.6□□□□□ -2.31
RNF13O43567 RN7SKP299-201ENST00000606679 301 ntBASIC0.6□□□□□ -2.31
RNF13O43567 AP000770.2-201ENST00000623694 100 ntBASIC0.6□□□□□ -2.31
RNF13O43567 ZNF299P-201ENST00000406845 1804 ntBASIC0.59□□□□□ -2.31
RNF13O43567 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
RNF13O43567 RNU6-595P-201ENST00000363944 107 ntBASIC0.59□□□□□ -2.31
RNF13O43567 Y_RNA.212-201ENST00000364177 102 ntBASIC0.59□□□□□ -2.31
RNF13O43567 Y_RNA.256-201ENST00000364594 104 ntBASIC0.59□□□□□ -2.31
RNF13O43567 Y_RNA.336-201ENST00000365307 109 ntBASIC0.59□□□□□ -2.31
RNF13O43567 RNU6-163P-201ENST00000384396 106 ntBASIC0.59□□□□□ -2.31
RNF13O43567 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.31
RNF13O43567 RNU6-908P-201ENST00000410160 94 ntBASIC0.59□□□□□ -2.31
RNF13O43567 MTND3P23-201ENST00000431980 347 ntBASIC0.59□□□□□ -2.31
RNF13O43567 AL137792.2-201ENST00000443484 235 ntBASIC0.59□□□□□ -2.31
RNF13O43567 AC019235.1-201ENST00000503847 207 ntBASIC0.59□□□□□ -2.31
RNF13O43567 RNU6-1291P-201ENST00000516591 104 ntBASIC0.59□□□□□ -2.31
RNF13O43567 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
RNF13O43567 AC093023.1-201ENST00000547375 507 ntBASIC0.59□□□□□ -2.31
RNF13O43567 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
RNF13O43567 MIR3192-201ENST00000584920 77 ntBASIC0.59□□□□□ -2.31
RNF13O43567 NBR2-204ENST00000587322 63 ntBASIC0.59□□□□□ -2.31
RNF13O43567 AC027279.3-201ENST00000625055 122 ntBASIC0.59□□□□□ -2.31
RNF13O43567 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
RNF13O43567 RNA5SP264-201ENST00000363115 107 ntBASIC0.58□□□□□ -2.32
RNF13O43567 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.58□□□□□ -2.32
RNF13O43567 RNU2-66P-201ENST00000410650 161 ntBASIC0.58□□□□□ -2.32
RNF13O43567 USP9YP16-201ENST00000430287 407 ntBASIC0.58□□□□□ -2.32
RNF13O43567 Z98949.2-201ENST00000440996 144 ntBASIC0.58□□□□□ -2.32
RNF13O43567 USP9YP23-201ENST00000455085 407 ntBASIC0.58□□□□□ -2.32
RNF13O43567 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.58□□□□□ -2.32
RNF13O43567 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.58□□□□□ -2.32
RNF13O43567 CYCTP-201ENST00000504253 315 ntBASIC0.58□□□□□ -2.32
RNF13O43567 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.58□□□□□ -2.32
RNF13O43567 AC010486.3-201ENST00000511602 785 ntBASIC0.58□□□□□ -2.32
RNF13O43567 DEFB108E-201ENST00000524692 240 ntBASIC0.58□□□□□ -2.32
RNF13O43567 AC133485.1-201ENST00000567176 124 ntBASIC0.58□□□□□ -2.32
RNF13O43567 AC138907.6-201ENST00000568401 126 ntBASIC0.58□□□□□ -2.32
RNF13O43567 MIR4273-201ENST00000582824 84 ntBASIC0.58□□□□□ -2.32
RNF13O43567 AC073544.1-201ENST00000600110 1595 ntBASIC0.57□□□□□ -2.32
RNF13O43567 RNU4-41P-201ENST00000364426 143 ntBASIC0.57□□□□□ -2.32
RNF13O43567 RNU6-117P-201ENST00000365415 107 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms