Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 AC005176.2-201ENST00000596933 147 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 RPS29P30-201ENST00000600975 111 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 AC091932.3-201ENST00000624223 323 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.69□□□□□ -2.14
XRCC3O43542 MTND5P6-201ENST00000422338 1798 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 AC005592.1-201ENST00000566527 1640 ntBASIC1.69□□□□□ -2.14
XRCC3O43542 AC091812.1-201ENST00000432235 1948 ntBASIC1.68□□□□□ -2.14
XRCC3O43542 SNORD114-7-201ENST00000362520 77 ntBASIC1.68□□□□□ -2.14
XRCC3O43542 Y_RNA.28-201ENST00000362554 111 ntBASIC1.68□□□□□ -2.14
XRCC3O43542 SNORA27.1-201ENST00000362604 124 ntBASIC1.68□□□□□ -2.14
XRCC3O43542 Y_RNA.458-201ENST00000384240 102 ntBASIC1.68□□□□□ -2.14
XRCC3O43542 RNU6-360P-201ENST00000390944 104 ntBASIC1.68□□□□□ -2.14
XRCC3O43542 RN7SKP223-201ENST00000410582 62 ntBASIC1.68□□□□□ -2.14
XRCC3O43542 AL139156.1-201ENST00000412785 841 ntBASIC1.68□□□□□ -2.14
XRCC3O43542 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.68□□□□□ -2.14
XRCC3O43542 RPS27P22-201ENST00000478056 241 ntBASIC1.68□□□□□ -2.14
XRCC3O43542 MIR5089-201ENST00000580047 84 ntBASIC1.68□□□□□ -2.14
XRCC3O43542 AL121655.1-201ENST00000605811 308 ntBASIC1.68□□□□□ -2.14
XRCC3O43542 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
XRCC3O43542 Y_RNA.11-201ENST00000362375 109 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 RNU6-661P-201ENST00000362409 107 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 Y_RNA.138-201ENST00000363462 102 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 RNU6-271P-201ENST00000363858 105 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 Y_RNA.230-201ENST00000364348 109 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 Y_RNA.361-201ENST00000365515 120 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 SNORD14.1-201ENST00000365609 90 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
XRCC3O43542 MIR1289-2-201ENST00000408360 111 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 RNU2-54P-201ENST00000410299 190 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 RNU6-1186P-201ENST00000410429 97 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 RNU2-7P-201ENST00000410794 178 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.67□□□□□ -2.14
XRCC3O43542 AL591806.2-201ENST00000433122 173 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.67□□□□□ -2.14
XRCC3O43542 HSPE1P9-201ENST00000440046 311 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 RNA5SP481-201ENST00000516814 122 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 AC027419.1-201ENST00000522976 328 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 AC023157.2-201ENST00000540596 141 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 DEFB122-202ENST00000569013 197 ntBASIC1.67□□□□□ -2.14
XRCC3O43542 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.67□□□□□ -2.14
XRCC3O43542 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.66□□□□□ -2.14
XRCC3O43542 AL356292.1-201ENST00000283110 373 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 Y_RNA.101-201ENST00000363154 102 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 Y_RNA.148-201ENST00000363557 117 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 MIR873-201ENST00000401120 77 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 MTCO2P12-201ENST00000427426 682 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 AL356320.1-201ENST00000429616 163 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 AC005002.2-201ENST00000438228 269 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 AC073910.1-201ENST00000445047 438 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 AC097462.1-201ENST00000514125 324 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 RNA5SP20-201ENST00000515976 84 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 AC040926.1-201ENST00000530195 238 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 AC006380.1-201ENST00000603598 186 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 Y_RNA.772-201ENST00000606692 102 ntBASIC1.66□□□□□ -2.14
XRCC3O43542 RNU1-22P-201ENST00000363334 158 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 RNA5SP99-201ENST00000364020 114 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 SNORD115-30-201ENST00000364117 82 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 RNU4-50P-201ENST00000364361 141 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 AL079342.1-201ENST00000401460 267 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 MIR548P-201ENST00000408336 84 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 RNU6-1199P-201ENST00000411249 104 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.65□□□□□ -2.15
XRCC3O43542 MTND1P14-201ENST00000427400 950 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 RPS27P1-201ENST00000450552 247 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 U8.20-201ENST00000459445 131 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 RPL36AP21-201ENST00000490372 323 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 Y_RNA.701-201ENST00000516812 110 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 AC015712.3-201ENST00000559380 164 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
XRCC3O43542 MIR4423-201ENST00000580922 80 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 AL390123.1-201ENST00000603216 237 ntBASIC1.65□□□□□ -2.15
XRCC3O43542 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
XRCC3O43542 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
XRCC3O43542 AC131280.1-202ENST00000624067 4211 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.64□□□□□ -2.15
XRCC3O43542 RNU6-407P-201ENST00000365280 104 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 Y_RNA.424-201ENST00000384063 103 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 RNU6-439P-201ENST00000384188 106 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 Y_RNA.462-201ENST00000384268 102 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 RNA5SP109-201ENST00000391010 116 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 Y_RNA.645-201ENST00000391229 102 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 AL354751.2-201ENST00000415471 210 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 FTH1P12-201ENST00000432137 551 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 snoU13.23-201ENST00000458863 104 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 AC025465.3-201ENST00000510570 311 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 Y_RNA.711-201ENST00000516993 102 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 Y_RNA.713-201ENST00000517013 96 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 RNU7-172P-201ENST00000517125 64 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 RNU6-988P-201ENST00000519081 107 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.64□□□□□ -2.15
XRCC3O43542 AC020661.2-201ENST00000560114 134 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 MIR1273D-201ENST00000577266 86 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 AC022217.4-201ENST00000604389 163 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 AC022441.3-201ENST00000605737 136 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 Y_RNA.783-201ENST00000613546 102 ntBASIC1.64□□□□□ -2.15
XRCC3O43542 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.64□□□□□ -2.15
XRCC3O43542 Y_RNA.446-201ENST00000384178 104 ntBASIC1.63□□□□□ -2.15
XRCC3O43542 Y_RNA.570-201ENST00000384750 101 ntBASIC1.63□□□□□ -2.15
XRCC3O43542 RPEP5-201ENST00000441137 268 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms