Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 MIR6895-201ENST00000613497 78 ntBASIC2.46□□□□□ -2.02
PRPF3O43395 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.46□□□□□ -2.02
PRPF3O43395 MIR6873-201ENST00000622788 63 ntBASIC2.46□□□□□ -2.02
PRPF3O43395 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PRPF3O43395 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
PRPF3O43395 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
PRPF3O43395 Y_RNA.101-201ENST00000363154 102 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 RNU6-1309P-201ENST00000363305 108 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 RNU6-454P-201ENST00000364292 107 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 RNU6-1175P-201ENST00000365200 107 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 RNU6-1109P-201ENST00000391187 107 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRPF3O43395 AL358176.2-201ENST00000425769 204 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 HMGN2P34-201ENST00000437647 269 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 SNORD65B-201ENST00000459126 73 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 RNU6-1041P-201ENST00000516254 102 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 RNU7-110P-201ENST00000516891 62 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 AC008269.2-201ENST00000561915 1105 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 PRR13P7-201ENST00000605538 430 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 AC011373.1-201ENST00000607270 237 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 AL359075.3-201ENST00000613288 217 ntBASIC2.45□□□□□ -2.02
PRPF3O43395 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRPF3O43395 AC245060.5-201ENST00000610778 3293 ntBASIC2.44□□□□□ -2.02
PRPF3O43395 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PRPF3O43395 RNU6-1019P-201ENST00000364424 107 ntBASIC2.44□□□□□ -2.02
PRPF3O43395 RNU6-1105P-201ENST00000384774 107 ntBASIC2.44□□□□□ -2.02
PRPF3O43395 MIR873-201ENST00000401120 77 ntBASIC2.44□□□□□ -2.02
PRPF3O43395 AL023284.1-201ENST00000403956 276 ntBASIC2.44□□□□□ -2.02
PRPF3O43395 AL117342.1-201ENST00000404861 406 ntBASIC2.44□□□□□ -2.02
PRPF3O43395 AC016909.1-201ENST00000415916 166 ntBASIC2.44□□□□□ -2.02
PRPF3O43395 EBAG9P1-201ENST00000418955 543 ntBASIC2.44□□□□□ -2.02
PRPF3O43395 AL731563.1-201ENST00000442202 214 ntBASIC2.44□□□□□ -2.02
PRPF3O43395 LINC01399-202ENST00000458450 244 ntBASIC2.44□□□□□ -2.02
PRPF3O43395 AC121758.2-201ENST00000553271 193 ntBASIC2.44□□□□□ -2.02
PRPF3O43395 U6.115-201ENST00000636045 103 ntBASIC2.44□□□□□ -2.02
PRPF3O43395 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
PRPF3O43395 Y_RNA.105-201ENST00000363182 111 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 RNU6-238P-201ENST00000363313 106 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 RNU1-96P-201ENST00000364163 162 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 RNU6-806P-201ENST00000365147 105 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 SNORA64-201ENST00000384674 134 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 RNU6-21P-201ENST00000384710 107 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 MIR562-201ENST00000384894 95 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 MIR597-201ENST00000384968 97 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 SNORD115-46-201ENST00000390982 71 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 snosnR66.1-201ENST00000391095 99 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 RNU6-710P-201ENST00000410424 105 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 RNU6-121P-201ENST00000410525 99 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.43□□□□□ -2.02
PRPF3O43395 AC024067.1-201ENST00000426199 223 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 DYNLT3P2-201ENST00000442517 295 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 RNU7-94P-201ENST00000459576 63 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 SEPT14P8-201ENST00000508026 178 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 IGKV3-31-201ENST00000523109 329 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.43□□□□□ -2.02
PRPF3O43395 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.43□□□□□ -2.02
PRPF3O43395 SNORD113-5-201ENST00000607261 78 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.43□□□□□ -2.02
PRPF3O43395 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
PRPF3O43395 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PRPF3O43395 Y_RNA.26-201ENST00000362539 101 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 Y_RNA.64-201ENST00000362845 102 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 Y_RNA.176-201ENST00000363815 109 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 Y_RNA.361-201ENST00000365515 120 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.42□□□□□ -2.02
PRPF3O43395 Y_RNA.446-201ENST00000384178 104 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 RNU6-713P-201ENST00000384761 107 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 Y_RNA.574-201ENST00000384766 95 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 RNU4-30P-201ENST00000410245 143 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.42□□□□□ -2.02
PRPF3O43395 MTND4LP30-201ENST00000454092 297 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 RNA5SP233-201ENST00000459153 113 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 Y_RNA.638-201ENST00000459374 113 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 snoU13.15-201ENST00000459407 104 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.42□□□□□ -2.02
PRPF3O43395 AC025465.3-201ENST00000510570 311 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 RNU1-142P-201ENST00000516682 145 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.42□□□□□ -2.02
PRPF3O43395 U6.73-201ENST00000619194 103 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 SDR42E1P4-201ENST00000620894 481 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 MIR219B-201ENST00000637023 88 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
PRPF3O43395 AC080100.1-201ENST00000624239 5356 ntBASIC2.42□□□□□ -2.02
PRPF3O43395 Y_RNA.133-201ENST00000363428 110 ntBASIC2.41□□□□□ -2.02
PRPF3O43395 SNORD113-8-201ENST00000363497 74 ntBASIC2.41□□□□□ -2.02
PRPF3O43395 Y_RNA.149-201ENST00000363558 117 ntBASIC2.41□□□□□ -2.02
PRPF3O43395 Y_RNA.331-201ENST00000365267 102 ntBASIC2.41□□□□□ -2.02
PRPF3O43395 SNORA67.3-201ENST00000384366 140 ntBASIC2.41□□□□□ -2.02
PRPF3O43395 RNU6-1248P-201ENST00000391096 64 ntBASIC2.41□□□□□ -2.02
PRPF3O43395 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.41□□□□□ -2.02
PRPF3O43395 RNA5SP501-201ENST00000410990 112 ntBASIC2.41□□□□□ -2.02
PRPF3O43395 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.41□□□□□ -2.02
PRPF3O43395 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
PRPF3O43395 MRPS10P1-201ENST00000448483 130 ntBASIC2.41□□□□□ -2.02
PRPF3O43395 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.41□□□□□ -2.02
PRPF3O43395 RNU6-155P-201ENST00000516347 100 ntBASIC2.41□□□□□ -2.02
PRPF3O43395 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.41□□□□□ -2.02
PRPF3O43395 AP003733.2-201ENST00000529409 171 ntBASIC2.41□□□□□ -2.02
PRPF3O43395 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.41□□□□□ -2.02
PRPF3O43395 AL162730.1-201ENST00000605734 292 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms