Protein–RNA interactions for Protein: O43186

CRX, Cone-rod homeobox protein, humanhuman

Predicted RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRXO43186 RNU6-136P-201ENST00000384663 107 ntBASIC0.27□□□□□ -2.37
CRXO43186 MIR1287-201ENST00000408492 90 ntBASIC0.27□□□□□ -2.37
CRXO43186 AL445567.1-201ENST00000439121 144 ntBASIC0.27□□□□□ -2.37
CRXO43186 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.27□□□□□ -2.37
CRXO43186 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.27□□□□□ -2.37
CRXO43186 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.27□□□□□ -2.37
CRXO43186 RPL30P10-201ENST00000488148 337 ntBASIC0.27□□□□□ -2.37
CRXO43186 MTCO2P30-201ENST00000503662 364 ntBASIC0.27□□□□□ -2.37
CRXO43186 AC018710.1-201ENST00000506509 158 ntBASIC0.27□□□□□ -2.37
CRXO43186 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
CRXO43186 RNA5SP20-201ENST00000515976 84 ntBASIC0.27□□□□□ -2.37
CRXO43186 RN7SKP12-201ENST00000516275 143 ntBASIC0.27□□□□□ -2.37
CRXO43186 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
CRXO43186 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.27□□□□□ -2.37
CRXO43186 AP003716.2-201ENST00000528260 108 ntBASIC0.27□□□□□ -2.37
CRXO43186 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.27□□□□□ -2.37
CRXO43186 FAM157A-202ENST00000615155 405 ntBASIC0.27□□□□□ -2.37
CRXO43186 AL158063.1-201ENST00000615349 536 ntBASIC0.27□□□□□ -2.37
CRXO43186 AC243829.3-201ENST00000622177 108 ntBASIC0.27□□□□□ -2.37
CRXO43186 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.26□□□□□ -2.37
CRXO43186 RNU6-348P-201ENST00000384386 107 ntBASIC0.26□□□□□ -2.37
CRXO43186 EIF4E2P1-201ENST00000393781 255 ntBASIC0.26□□□□□ -2.37
CRXO43186 RNU6-496P-201ENST00000516145 99 ntBASIC0.26□□□□□ -2.37
CRXO43186 AC036111.3-201ENST00000526389 112 ntBASIC0.26□□□□□ -2.37
CRXO43186 MIR4711-201ENST00000578274 70 ntBASIC0.26□□□□□ -2.37
CRXO43186 MIR4300-201ENST00000581016 96 ntBASIC0.26□□□□□ -2.37
CRXO43186 AL078603.1-201ENST00000603824 313 ntBASIC0.26□□□□□ -2.37
CRXO43186 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.26□□□□□ -2.37
CRXO43186 AC068137.4-201ENST00000638485 296 ntBASIC0.26□□□□□ -2.37
CRXO43186 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.26□□□□□ -2.37
CRXO43186 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
CRXO43186 Y_RNA.354-201ENST00000365448 111 ntBASIC0.25□□□□□ -2.37
CRXO43186 RNU6-1103P-201ENST00000384150 107 ntBASIC0.25□□□□□ -2.37
CRXO43186 RNY1P14-201ENST00000384426 108 ntBASIC0.25□□□□□ -2.37
CRXO43186 MIR520C-201ENST00000385005 87 ntBASIC0.25□□□□□ -2.37
CRXO43186 MIR936-201ENST00000401264 98 ntBASIC0.25□□□□□ -2.37
CRXO43186 RNA5SP193-201ENST00000410353 107 ntBASIC0.25□□□□□ -2.37
CRXO43186 AC018865.2-201ENST00000423631 129 ntBASIC0.25□□□□□ -2.37
CRXO43186 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.25□□□□□ -2.37
CRXO43186 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.25□□□□□ -2.37
CRXO43186 PCMTD1P1-201ENST00000455560 355 ntBASIC0.25□□□□□ -2.37
CRXO43186 RNU6-1132P-201ENST00000459214 107 ntBASIC0.25□□□□□ -2.37
CRXO43186 RNU6-1208P-201ENST00000459588 107 ntBASIC0.25□□□□□ -2.37
CRXO43186 AC093303.1-201ENST00000514549 295 ntBASIC0.25□□□□□ -2.37
CRXO43186 RNU7-41P-201ENST00000515917 61 ntBASIC0.25□□□□□ -2.37
CRXO43186 RNA5SP220-201ENST00000516298 104 ntBASIC0.25□□□□□ -2.37
CRXO43186 SNORA40.12-201ENST00000516329 111 ntBASIC0.25□□□□□ -2.37
CRXO43186 AF235103.2-201ENST00000525753 346 ntBASIC0.25□□□□□ -2.37
CRXO43186 AC023442.1-201ENST00000531247 422 ntBASIC0.25□□□□□ -2.37
CRXO43186 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.25□□□□□ -2.37
CRXO43186 SNORA4-201ENST00000584302 138 ntBASIC0.25□□□□□ -2.37
CRXO43186 AC120024.3-201ENST00000603167 156 ntBASIC0.25□□□□□ -2.37
CRXO43186 AC010999.1-201ENST00000611856 324 ntBASIC0.25□□□□□ -2.37
CRXO43186 RMST_2.1-201ENST00000617263 136 ntBASIC0.25□□□□□ -2.37
CRXO43186 AL603755.1-201ENST00000619504 163 ntBASIC0.25□□□□□ -2.37
CRXO43186 Y_RNA.1-201ENST00000352915 104 ntBASIC0.24□□□□□ -2.37
CRXO43186 SNORD105-201ENST00000386910 85 ntBASIC0.24□□□□□ -2.37
CRXO43186 RNU1-139P-201ENST00000391307 165 ntBASIC0.24□□□□□ -2.37
CRXO43186 SNORD111-201ENST00000408139 94 ntBASIC0.24□□□□□ -2.37
CRXO43186 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.24□□□□□ -2.37
CRXO43186 CYCTP-201ENST00000504253 315 ntBASIC0.24□□□□□ -2.37
CRXO43186 AC114811.1-201ENST00000507207 168 ntBASIC0.24□□□□□ -2.37
CRXO43186 RNA5SP436-201ENST00000516020 115 ntBASIC0.24□□□□□ -2.37
CRXO43186 POLR3GP2-201ENST00000588366 668 ntBASIC0.24□□□□□ -2.37
CRXO43186 AC243829.6-201ENST00000612652 106 ntBASIC0.24□□□□□ -2.37
CRXO43186 AC022709.1-201ENST00000615967 87 ntBASIC0.24□□□□□ -2.37
CRXO43186 AC099654.12-201ENST00000639868 649 ntBASIC0.24□□□□□ -2.37
CRXO43186 SNORD68-201ENST00000363214 84 ntBASIC0.23□□□□□ -2.37
CRXO43186 Y_RNA.116-201ENST00000363292 103 ntBASIC0.23□□□□□ -2.37
CRXO43186 RNU5F-3P-201ENST00000363767 117 ntBASIC0.23□□□□□ -2.37
CRXO43186 MIR516B2-201ENST00000385190 85 ntBASIC0.23□□□□□ -2.37
CRXO43186 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.23□□□□□ -2.37
CRXO43186 MIR1298-201ENST00000408783 112 ntBASIC0.23□□□□□ -2.37
CRXO43186 RN7SKP142-201ENST00000411236 328 ntBASIC0.23□□□□□ -2.37
CRXO43186 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.23□□□□□ -2.37
CRXO43186 MTND3P16-201ENST00000452205 344 ntBASIC0.23□□□□□ -2.37
CRXO43186 AC083904.1-201ENST00000487828 231 ntBASIC0.23□□□□□ -2.37
CRXO43186 RN7SKP287-201ENST00000516546 266 ntBASIC0.23□□□□□ -2.37
CRXO43186 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.23□□□□□ -2.37
CRXO43186 PIGPP4-201ENST00000584447 307 ntBASIC0.23□□□□□ -2.37
CRXO43186 AC093424.1-201ENST00000604999 338 ntBASIC0.23□□□□□ -2.37
CRXO43186 SNORA27.1-201ENST00000362604 124 ntBASIC0.22□□□□□ -2.37
CRXO43186 Y_RNA.167-201ENST00000363735 109 ntBASIC0.22□□□□□ -2.37
CRXO43186 MIR452-201ENST00000385020 85 ntBASIC0.22□□□□□ -2.37
CRXO43186 MTCYBP4-201ENST00000401524 249 ntBASIC0.22□□□□□ -2.37
CRXO43186 RNU5A-5P-201ENST00000411054 116 ntBASIC0.22□□□□□ -2.37
CRXO43186 MRPS18CP6-201ENST00000423587 223 ntBASIC0.22□□□□□ -2.37
CRXO43186 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.22□□□□□ -2.37
CRXO43186 RPS3AP17-201ENST00000472594 777 ntBASIC0.22□□□□□ -2.37
CRXO43186 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.22□□□□□ -2.37
CRXO43186 RNU6-1278P-201ENST00000516130 107 ntBASIC0.22□□□□□ -2.37
CRXO43186 RNU6-1096P-201ENST00000517089 102 ntBASIC0.22□□□□□ -2.37
CRXO43186 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.22□□□□□ -2.37
CRXO43186 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.22□□□□□ -2.37
CRXO43186 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.22□□□□□ -2.37
CRXO43186 AC127459.3-201ENST00000624328 466 ntBASIC0.22□□□□□ -2.37
CRXO43186 AC008133.2-201ENST00000624540 351 ntBASIC0.22□□□□□ -2.37
CRXO43186 AC027279.3-201ENST00000625055 122 ntBASIC0.22□□□□□ -2.37
CRXO43186 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
CRXO43186 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms