Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 FER-210ENST00000628534 558 ntTSL 5 BASIC0.31□□□□□ -2.36
CHD2O14647 RNU6-1266P-201ENST00000362794 105 ntBASIC0.3□□□□□ -2.36
CHD2O14647 RNY3P10-201ENST00000384764 102 ntBASIC0.3□□□□□ -2.36
CHD2O14647 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.3□□□□□ -2.36
CHD2O14647 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.3□□□□□ -2.36
CHD2O14647 AL359672.1-201ENST00000442302 409 ntBASIC0.3□□□□□ -2.36
CHD2O14647 AC002350.1-201ENST00000490759 375 ntBASIC0.3□□□□□ -2.36
CHD2O14647 RNU6-1110P-201ENST00000516462 101 ntBASIC0.3□□□□□ -2.36
CHD2O14647 AP002004.2-201ENST00000531656 154 ntBASIC0.3□□□□□ -2.36
CHD2O14647 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.3□□□□□ -2.36
CHD2O14647 AC023157.2-201ENST00000540596 141 ntBASIC0.3□□□□□ -2.36
CHD2O14647 MIR4636-201ENST00000582271 80 ntBASIC0.3□□□□□ -2.36
CHD2O14647 AC245884.10-201ENST00000597355 337 ntBASIC0.3□□□□□ -2.36
CHD2O14647 AL158209.2-201ENST00000619266 216 ntBASIC0.3□□□□□ -2.36
CHD2O14647 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.3□□□□□ -2.36
CHD2O14647 Y_RNA.60-201ENST00000362831 98 ntBASIC0.29□□□□□ -2.36
CHD2O14647 Y_RNA.151-201ENST00000363566 112 ntBASIC0.29□□□□□ -2.36
CHD2O14647 SNORD115-32-201ENST00000364079 82 ntBASIC0.29□□□□□ -2.36
CHD2O14647 RNU6-1322P-201ENST00000364309 107 ntBASIC0.29□□□□□ -2.36
CHD2O14647 SNORD87-201ENST00000364849 89 ntBASIC0.29□□□□□ -2.36
CHD2O14647 Y_RNA.518-201ENST00000384552 113 ntBASIC0.29□□□□□ -2.36
CHD2O14647 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.29□□□□□ -2.36
CHD2O14647 CETN4P-201ENST00000432407 469 ntBASIC0.29□□□□□ -2.36
CHD2O14647 AC093850.1-201ENST00000454121 251 ntBASIC0.29□□□□□ -2.36
CHD2O14647 AC074133.1-201ENST00000515696 183 ntBASIC0.29□□□□□ -2.36
CHD2O14647 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.29□□□□□ -2.36
CHD2O14647 AC104383.1-201ENST00000530297 370 ntBASIC0.29□□□□□ -2.36
CHD2O14647 UBL5P4-201ENST00000562584 236 ntBASIC0.29□□□□□ -2.36
CHD2O14647 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.29□□□□□ -2.36
CHD2O14647 AL117336.2-201ENST00000602435 335 ntBASIC0.29□□□□□ -2.36
CHD2O14647 AC073349.3-201ENST00000617616 186 ntBASIC0.29□□□□□ -2.36
CHD2O14647 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
CHD2O14647 AC090625.1-201ENST00000357130 210 ntBASIC0.29□□□□□ -2.36
CHD2O14647 RNU6-727P-201ENST00000363592 107 ntBASIC0.29□□□□□ -2.36
CHD2O14647 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
CHD2O14647 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.29□□□□□ -2.36
CHD2O14647 AL162725.1-201ENST00000435405 301 ntBASIC0.29□□□□□ -2.36
CHD2O14647 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.29□□□□□ -2.36
CHD2O14647 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.29□□□□□ -2.36
CHD2O14647 MTCO2P18-201ENST00000457151 658 ntBASIC0.29□□□□□ -2.36
CHD2O14647 TPT1P7-201ENST00000458300 517 ntBASIC0.29□□□□□ -2.36
CHD2O14647 AL358944.1-201ENST00000528537 144 ntBASIC0.29□□□□□ -2.36
CHD2O14647 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.29□□□□□ -2.36
CHD2O14647 MIR4424-201ENST00000585257 86 ntBASIC0.29□□□□□ -2.36
CHD2O14647 AC073648.5-201ENST00000603502 305 ntBASIC0.29□□□□□ -2.36
CHD2O14647 SNORA1B-201ENST00000362535 133 ntBASIC0.28□□□□□ -2.36
CHD2O14647 Y_RNA.169-201ENST00000363745 96 ntBASIC0.28□□□□□ -2.36
CHD2O14647 RNU6-376P-201ENST00000384731 106 ntBASIC0.28□□□□□ -2.36
CHD2O14647 MTCYBP10-201ENST00000424905 650 ntBASIC0.28□□□□□ -2.36
CHD2O14647 RNU7-128P-201ENST00000517247 62 ntBASIC0.28□□□□□ -2.36
CHD2O14647 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.28□□□□□ -2.36
CHD2O14647 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.28□□□□□ -2.36
CHD2O14647 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.28□□□□□ -2.36
CHD2O14647 AL136370.1-201ENST00000608166 691 ntBASIC0.28□□□□□ -2.36
CHD2O14647 AC008873.1-201ENST00000625051 138 ntBASIC0.28□□□□□ -2.36
CHD2O14647 SNORD114-7-201ENST00000362520 77 ntBASIC0.27□□□□□ -2.37
CHD2O14647 RNU6-1327P-201ENST00000365302 105 ntBASIC0.27□□□□□ -2.37
CHD2O14647 MIR520C-201ENST00000385005 87 ntBASIC0.27□□□□□ -2.37
CHD2O14647 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.27□□□□□ -2.37
CHD2O14647 MTND3P7-201ENST00000474435 343 ntBASIC0.27□□□□□ -2.37
CHD2O14647 RNA5SP20-201ENST00000515976 84 ntBASIC0.27□□□□□ -2.37
CHD2O14647 RNU6-1332P-201ENST00000516666 104 ntBASIC0.27□□□□□ -2.37
CHD2O14647 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.27□□□□□ -2.37
CHD2O14647 EIF1P4-201ENST00000572664 335 ntBASIC0.27□□□□□ -2.37
CHD2O14647 AC092747.3-201ENST00000603769 301 ntBASIC0.27□□□□□ -2.37
CHD2O14647 RNU6-1084P-201ENST00000362498 107 ntBASIC0.27□□□□□ -2.37
CHD2O14647 RNA5SP264-201ENST00000363115 107 ntBASIC0.27□□□□□ -2.37
CHD2O14647 Y_RNA.100-201ENST00000363141 102 ntBASIC0.27□□□□□ -2.37
CHD2O14647 Y_RNA.336-201ENST00000365307 109 ntBASIC0.27□□□□□ -2.37
CHD2O14647 RNU6-282P-201ENST00000365357 103 ntBASIC0.27□□□□□ -2.37
CHD2O14647 RNU6-297P-201ENST00000384636 107 ntBASIC0.27□□□□□ -2.37
CHD2O14647 SNORD105-201ENST00000386910 85 ntBASIC0.27□□□□□ -2.37
CHD2O14647 RNU6-248P-201ENST00000410720 107 ntBASIC0.27□□□□□ -2.37
CHD2O14647 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.27□□□□□ -2.37
CHD2O14647 RNU7-180P-201ENST00000459240 63 ntBASIC0.27□□□□□ -2.37
CHD2O14647 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.27□□□□□ -2.37
CHD2O14647 RNU6-232P-201ENST00000517144 64 ntBASIC0.27□□□□□ -2.37
CHD2O14647 AP003716.2-201ENST00000528260 108 ntBASIC0.27□□□□□ -2.37
CHD2O14647 MIR4667-201ENST00000578933 66 ntBASIC0.27□□□□□ -2.37
CHD2O14647 AL138726.1-201ENST00000614873 333 ntBASIC0.27□□□□□ -2.37
CHD2O14647 Y_RNA.201-201ENST00000364052 96 ntBASIC0.26□□□□□ -2.37
CHD2O14647 Y_RNA.378-201ENST00000365652 113 ntBASIC0.26□□□□□ -2.37
CHD2O14647 Y_RNA.481-201ENST00000384373 102 ntBASIC0.26□□□□□ -2.37
CHD2O14647 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.26□□□□□ -2.37
CHD2O14647 MRPS18CP6-201ENST00000423587 223 ntBASIC0.26□□□□□ -2.37
CHD2O14647 AL606489.2-201ENST00000433886 234 ntBASIC0.26□□□□□ -2.37
CHD2O14647 MTCO2P16-201ENST00000436962 677 ntBASIC0.26□□□□□ -2.37
CHD2O14647 AC073415.1-201ENST00000449240 153 ntBASIC0.26□□□□□ -2.37
CHD2O14647 ZNF736P8Y-201ENST00000451913 669 ntBASIC0.26□□□□□ -2.37
CHD2O14647 RNU6-261P-201ENST00000459506 102 ntBASIC0.26□□□□□ -2.37
CHD2O14647 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.26□□□□□ -2.37
CHD2O14647 MTND1P22-201ENST00000510572 951 ntBASIC0.26□□□□□ -2.37
CHD2O14647 RNU1-117P-201ENST00000517041 158 ntBASIC0.26□□□□□ -2.37
CHD2O14647 RNU6-1096P-201ENST00000517089 102 ntBASIC0.26□□□□□ -2.37
CHD2O14647 AF235103.2-201ENST00000525753 346 ntBASIC0.26□□□□□ -2.37
CHD2O14647 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.26□□□□□ -2.37
CHD2O14647 MIR4528-201ENST00000577763 90 ntBASIC0.26□□□□□ -2.37
CHD2O14647 AP000568.1-201ENST00000282964 442 ntBASIC0.25□□□□□ -2.37
CHD2O14647 RNU6-1335P-201ENST00000365426 107 ntBASIC0.25□□□□□ -2.37
CHD2O14647 RNU5A-6P-201ENST00000384136 116 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms