Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.38□□□□□ -2.35
UBFD1O14562 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.38□□□□□ -2.35
UBFD1O14562 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.38□□□□□ -2.35
UBFD1O14562 LINC01399-202ENST00000458450 244 ntBASIC0.38□□□□□ -2.35
UBFD1O14562 RNU6-261P-201ENST00000459506 102 ntBASIC0.38□□□□□ -2.35
UBFD1O14562 HMGN2P26-201ENST00000463169 339 ntBASIC0.38□□□□□ -2.35
UBFD1O14562 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.38□□□□□ -2.35
UBFD1O14562 AC113410.1-201ENST00000505029 247 ntBASIC0.38□□□□□ -2.35
UBFD1O14562 AC023827.1-201ENST00000569247 97 ntBASIC0.38□□□□□ -2.35
UBFD1O14562 AC100830.2-201ENST00000581636 240 ntBASIC0.38□□□□□ -2.35
UBFD1O14562 AC009248.2-201ENST00000619826 254 ntBASIC0.38□□□□□ -2.35
UBFD1O14562 Y_RNA.1-201ENST00000352915 104 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 RNU6-222P-201ENST00000362438 107 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 Y_RNA.330-201ENST00000365230 109 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 SNORA75-201ENST00000384158 137 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 RNU6-110P-201ENST00000384508 104 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 HMGN1P33-201ENST00000432945 451 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 AL162725.1-201ENST00000435405 301 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 RNU6-1208P-201ENST00000459588 107 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 AC098869.1-201ENST00000481627 292 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 AC083904.1-201ENST00000487828 231 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 RPL30P10-201ENST00000488148 337 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 Y_RNA.654-201ENST00000497848 106 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.37□□□□□ -2.35
UBFD1O14562 AC097462.1-201ENST00000514125 324 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 Y_RNA.681-201ENST00000516445 113 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 RNA5SP121-201ENST00000516537 101 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 AC007834.2-201ENST00000536310 343 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.37□□□□□ -2.35
UBFD1O14562 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.37□□□□□ -2.35
UBFD1O14562 MIR4514-201ENST00000581410 57 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 AC091178.2-201ENST00000584401 117 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 AC073534.2-201ENST00000620377 381 ntBASIC0.37□□□□□ -2.35
UBFD1O14562 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
UBFD1O14562 Y_RNA.409-201ENST00000383990 98 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 RNU6-933P-201ENST00000384424 107 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 SNORD89-201ENST00000390981 114 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 RNU6-159P-201ENST00000391080 106 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 MTCO1P20-201ENST00000425366 358 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 Z98949.2-201ENST00000440996 144 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 MTND3P16-201ENST00000452205 344 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 AP000870.1-201ENST00000472927 406 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 RNU6-1291P-201ENST00000516591 104 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 RNU7-172P-201ENST00000517125 64 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 AC026371.1-201ENST00000551867 419 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 AC131055.1-201ENST00000584626 316 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 AC012557.2-201ENST00000605919 418 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 AL158063.1-201ENST00000615349 536 ntBASIC0.36□□□□□ -2.35
UBFD1O14562 RNA5SP264-201ENST00000363115 107 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 SNORD115-32-201ENST00000364079 82 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 RNU4-9P-201ENST00000364951 139 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 SNORA20B-201ENST00000384220 132 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 RNU6-793P-201ENST00000384233 104 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 EIF4E2P1-201ENST00000393781 255 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.35□□□□□ -2.35
UBFD1O14562 AC244023.1-201ENST00000426884 112 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 FABP5P4-201ENST00000437203 171 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.35□□□□□ -2.35
UBFD1O14562 AL353572.1-201ENST00000442490 417 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 MTCO2P7-201ENST00000446518 666 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.35□□□□□ -2.35
UBFD1O14562 MTCO2P30-201ENST00000503662 364 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 AC010598.1-201ENST00000510378 103 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 SNORD111.1-201ENST00000516421 86 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 RNU2-56P-201ENST00000516826 190 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 RNU11-2P-201ENST00000516898 142 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 AP003716.2-201ENST00000528260 108 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 AC242498.1-201ENST00000604134 111 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 AC093913.1-201ENST00000614178 329 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 AC243994.1-201ENST00000618627 109 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 AL008636.1-201ENST00000625038 1018 ntBASIC0.35□□□□□ -2.35
UBFD1O14562 SNORA25.3-201ENST00000363205 127 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 RNU6-522P-201ENST00000364497 107 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 Y_RNA.372-201ENST00000365599 102 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 SNORA69-201ENST00000383895 132 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 RNU6-945P-201ENST00000383947 107 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 RNU6-790P-201ENST00000384479 105 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 MIR153-2-201ENST00000385225 87 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 AL590632.1-201ENST00000424289 371 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC0.34□□□□□ -2.36
UBFD1O14562 MTND1P11-201ENST00000456661 876 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.34□□□□□ -2.36
UBFD1O14562 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.34□□□□□ -2.36
UBFD1O14562 RNU6-341P-201ENST00000516973 96 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 AC022868.1-201ENST00000517767 391 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 AC104383.1-201ENST00000530297 370 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 AC109810.1-201ENST00000534066 224 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 AC087752.4-201ENST00000605911 462 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 7SK.10-201ENST00000621414 298 ntBASIC0.34□□□□□ -2.36
UBFD1O14562 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.33□□□□□ -2.36
UBFD1O14562 AC073544.1-201ENST00000600110 1595 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 RNU6-254P-201ENST00000363377 107 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 Y_RNA.179-201ENST00000363844 90 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 Y_RNA.184-201ENST00000363884 108 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 MIR514A2-201ENST00000385131 88 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 MIR514A3-201ENST00000385132 88 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 MIR1185-1-201ENST00000408598 86 ntBASIC0.33□□□□□ -2.36
UBFD1O14562 RNU2-70P-201ENST00000410718 179 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 250.6 ms