Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 Y_RNA.262-201ENST00000364641 102 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 RNU6-215P-201ENST00000365169 102 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 Y_RNA.331-201ENST00000365267 102 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 Y_RNA.343-201ENST00000365354 112 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 RNU6-245P-201ENST00000384020 107 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 RNU6-1145P-201ENST00000384246 107 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 Y_RNA.488-201ENST00000384403 102 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 RNU1-148P-201ENST00000384472 162 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TRIM38O00635 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
TRIM38O00635 RNU6-257P-201ENST00000410238 98 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 Y_RNA.629-201ENST00000411368 105 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM38O00635 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM38O00635 AL121890.1-201ENST00000435457 205 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 SRIP1-201ENST00000489235 288 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM38O00635 SNORD116-25-201ENST00000516517 92 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 RNU6-667P-201ENST00000517186 102 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM38O00635 CYCSP26-201ENST00000534107 320 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.59□□□□□ -1.99
TRIM38O00635 AC005296.1-201ENST00000616145 209 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 AC005562.2-201ENST00000618264 111 ntBASIC2.59□□□□□ -1.99
TRIM38O00635 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM38O00635 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM38O00635 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
TRIM38O00635 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.59□□□□□ -2
TRIM38O00635 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
TRIM38O00635 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM38O00635 Y_RNA.215-201ENST00000364204 112 ntBASIC2.58□□□□□ -2
TRIM38O00635 Y_RNA.571-201ENST00000384753 98 ntBASIC2.58□□□□□ -2
TRIM38O00635 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.58□□□□□ -2
TRIM38O00635 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.58□□□□□ -2
TRIM38O00635 SUMO2P18-201ENST00000518873 252 ntBASIC2.58□□□□□ -2
TRIM38O00635 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.58□□□□□ -2
TRIM38O00635 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.58□□□□□ -2
TRIM38O00635 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.58□□□□□ -2
TRIM38O00635 MIR5692C2-201ENST00000577959 77 ntBASIC2.58□□□□□ -2
TRIM38O00635 SNORD53-201ENST00000579969 78 ntBASIC2.58□□□□□ -2
TRIM38O00635 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.58□□□□□ -2
TRIM38O00635 TCL6_2.1-201ENST00000615162 119 ntBASIC2.58□□□□□ -2
TRIM38O00635 AC006001.4-201ENST00000622243 395 ntBASIC2.58□□□□□ -2
TRIM38O00635 snoU18.1-201ENST00000629629 71 ntBASIC2.58□□□□□ -2
TRIM38O00635 FO624990.1-201ENST00000636373 85 ntBASIC2.58□□□□□ -2
TRIM38O00635 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM38O00635 RNU4-80P-201ENST00000363200 141 ntBASIC2.57□□□□□ -2
TRIM38O00635 Y_RNA.230-201ENST00000364348 109 ntBASIC2.57□□□□□ -2
TRIM38O00635 Y_RNA.261-201ENST00000364631 102 ntBASIC2.57□□□□□ -2
TRIM38O00635 RNU6-449P-201ENST00000383914 107 ntBASIC2.57□□□□□ -2
TRIM38O00635 Y_RNA.412-201ENST00000384001 104 ntBASIC2.57□□□□□ -2
TRIM38O00635 RNU6-44P-201ENST00000384045 107 ntBASIC2.57□□□□□ -2
TRIM38O00635 RNU6-211P-201ENST00000384047 107 ntBASIC2.57□□□□□ -2
TRIM38O00635 RNU1-52P-201ENST00000384190 164 ntBASIC2.57□□□□□ -2
TRIM38O00635 SNORA70B-201ENST00000384210 135 ntBASIC2.57□□□□□ -2
TRIM38O00635 MIR569-201ENST00000385228 96 ntBASIC2.57□□□□□ -2
TRIM38O00635 SRIP3-201ENST00000413200 219 ntBASIC2.57□□□□□ -2
TRIM38O00635 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.57□□□□□ -2
TRIM38O00635 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.57□□□□□ -2
TRIM38O00635 YWHAEP4-201ENST00000505390 198 ntBASIC2.57□□□□□ -2
TRIM38O00635 RNA5SP24-201ENST00000516478 95 ntBASIC2.57□□□□□ -2
TRIM38O00635 RNU6-965P-201ENST00000516721 96 ntBASIC2.57□□□□□ -2
TRIM38O00635 RNU6-58P-201ENST00000517143 103 ntBASIC2.57□□□□□ -2
TRIM38O00635 AP005660.1-201ENST00000522972 293 ntBASIC2.57□□□□□ -2
TRIM38O00635 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.57□□□□□ -2
TRIM38O00635 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.57□□□□□ -2
TRIM38O00635 MIR4446-201ENST00000578505 67 ntBASIC2.57□□□□□ -2
TRIM38O00635 MIR3145-201ENST00000580727 82 ntBASIC2.57□□□□□ -2
TRIM38O00635 AL008718.3-201ENST00000610217 321 ntBASIC2.57□□□□□ -2
TRIM38O00635 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.57□□□□□ -2
TRIM38O00635 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.57□□□□□ -2
TRIM38O00635 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.57□□□□□ -2
TRIM38O00635 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
TRIM38O00635 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
TRIM38O00635 RNA5SP432-201ENST00000362480 116 ntBASIC2.56□□□□□ -2
TRIM38O00635 RNU4-84P-201ENST00000364200 139 ntBASIC2.56□□□□□ -2
TRIM38O00635 RNA5SP205-201ENST00000364653 136 ntBASIC2.56□□□□□ -2
TRIM38O00635 RNU6-541P-201ENST00000384709 110 ntBASIC2.56□□□□□ -2
TRIM38O00635 RNA5SP210-201ENST00000391034 120 ntBASIC2.56□□□□□ -2
TRIM38O00635 RNU6-159P-201ENST00000391080 106 ntBASIC2.56□□□□□ -2
TRIM38O00635 RNA5SP181-201ENST00000410246 98 ntBASIC2.56□□□□□ -2
TRIM38O00635 AL390729.2-201ENST00000416137 156 ntBASIC2.56□□□□□ -2
TRIM38O00635 SEPT7P4-201ENST00000437076 306 ntBASIC2.56□□□□□ -2
TRIM38O00635 RNU6-191P-201ENST00000516295 94 ntBASIC2.56□□□□□ -2
TRIM38O00635 RNA5SP137-201ENST00000516833 135 ntBASIC2.56□□□□□ -2
TRIM38O00635 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.56□□□□□ -2
TRIM38O00635 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.56□□□□□ -2
TRIM38O00635 AC026271.5-201ENST00000577873 130 ntBASIC2.56□□□□□ -2
TRIM38O00635 AC005176.2-201ENST00000596933 147 ntBASIC2.56□□□□□ -2
TRIM38O00635 AC022441.3-201ENST00000605737 136 ntBASIC2.56□□□□□ -2
TRIM38O00635 AC064859.1-201ENST00000624741 174 ntBASIC2.56□□□□□ -2
TRIM38O00635 MIR1248-201ENST00000629190 106 ntBASIC2.56□□□□□ -2
TRIM38O00635 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.56□□□□□ -2
TRIM38O00635 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM38O00635 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
TRIM38O00635 RNA5SP393-201ENST00000363423 117 ntBASIC2.55□□□□□ -2
TRIM38O00635 Y_RNA.353-201ENST00000365440 108 ntBASIC2.55□□□□□ -2
TRIM38O00635 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.55□□□□□ -2
TRIM38O00635 SNORA18.2-201ENST00000383865 132 ntBASIC2.55□□□□□ -2
TRIM38O00635 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms