Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 MTND5P32-201ENST00000560711 1802 ntBASIC-0.88□□□□□ -2.55
HMGN4O00479 AC099786.3-201ENST00000565735 1410 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 AC106754.1-201ENST00000562632 1513 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 RNU6-609P-201ENST00000365459 107 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 RNU6-205P-201ENST00000390858 107 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 RNU4-30P-201ENST00000410245 143 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 RNU2-54P-201ENST00000410299 190 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 RNU6-387P-201ENST00000411331 105 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 AC133104.1-201ENST00000429100 218 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 USP9YP25-201ENST00000457708 443 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 SNORD65B-201ENST00000459126 73 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.89□□□□□ -2.55
HMGN4O00479 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC-0.89□□□□□ -2.55
HMGN4O00479 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 RNU6-469P-201ENST00000516253 101 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.89□□□□□ -2.55
HMGN4O00479 HIF1AP1-201ENST00000553642 175 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 MTND1P8-201ENST00000571424 950 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 MIR3118-1-201ENST00000581787 76 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 MIR4802-201ENST00000581881 80 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 SNORD92-201ENST00000585078 85 ntBASIC-0.89□□□□□ -2.55
HMGN4O00479 RNU4-21P-201ENST00000362802 126 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 RNU6-723P-201ENST00000383973 107 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 MIR604-201ENST00000384880 94 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 MIR224-201ENST00000384889 81 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 SNORA26.5-201ENST00000391215 123 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 AL136310.1-201ENST00000404926 654 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 BTF3P11-201ENST00000426582 477 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC-0.9□□□□□ -2.55
HMGN4O00479 POLR2KP2-201ENST00000438155 177 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 RNU6-1028P-201ENST00000517164 93 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 RNU2-12P-201ENST00000517216 168 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 SNORD11B-201ENST00000607707 90 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 AL442067.1-201ENST00000613261 223 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 AC139792.3-201ENST00000623525 224 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 AC010608.3-201ENST00000625048 527 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 AC019226.2-201ENST00000625973 424 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 SCARNA4-201ENST00000629045 128 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 MTND4P9-201ENST00000507819 1346 ntBASIC-0.9□□□□□ -2.55
HMGN4O00479 RNU6-480P-201ENST00000384332 107 ntBASIC-0.91□□□□□ -2.56
HMGN4O00479 RNU6-39P-201ENST00000384344 107 ntBASIC-0.91□□□□□ -2.56
HMGN4O00479 MIR125B2-201ENST00000385128 89 ntBASIC-0.91□□□□□ -2.56
HMGN4O00479 RNA5SP494-201ENST00000410653 129 ntBASIC-0.91□□□□□ -2.56
HMGN4O00479 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-0.91□□□□□ -2.56
HMGN4O00479 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.91□□□□□ -2.56
HMGN4O00479 ZNF114P1-201ENST00000453500 292 ntBASIC-0.91□□□□□ -2.56
HMGN4O00479 AC005178.1-201ENST00000508392 440 ntBASIC-0.91□□□□□ -2.56
HMGN4O00479 RNU6-504P-201ENST00000516568 104 ntBASIC-0.91□□□□□ -2.56
HMGN4O00479 RNA5SP337-201ENST00000517007 109 ntBASIC-0.91□□□□□ -2.56
HMGN4O00479 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.91□□□□□ -2.56
HMGN4O00479 RNU6-323P-201ENST00000521915 107 ntBASIC-0.91□□□□□ -2.56
HMGN4O00479 MIR4264-201ENST00000583520 66 ntBASIC-0.91□□□□□ -2.56
HMGN4O00479 RNU5A-5P-201ENST00000411054 116 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 ELOCP21-201ENST00000412558 336 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 MTND4P3-201ENST00000417829 541 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-0.92□□□□□ -2.56
HMGN4O00479 SUMO1P3-201ENST00000439961 304 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 RNU6-1037P-201ENST00000459571 107 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 AC022616.3-201ENST00000523940 148 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 CR383656.4-201ENST00000546909 122 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.92□□□□□ -2.56
HMGN4O00479 MIR4432-201ENST00000581823 84 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 RNU1-29P-201ENST00000606574 126 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 FAM157A-202ENST00000615155 405 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 MIR6514-201ENST00000622549 70 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 AL445984.1-201ENST00000637834 659 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 AC091304.10-201ENST00000641554 121 ntBASIC-0.92□□□□□ -2.56
HMGN4O00479 RNU6-224P-201ENST00000384055 107 ntBASIC-0.93□□□□□ -2.56
HMGN4O00479 MIR558-201ENST00000384920 94 ntBASIC-0.93□□□□□ -2.56
HMGN4O00479 MIR501-201ENST00000390204 84 ntBASIC-0.93□□□□□ -2.56
HMGN4O00479 MTCO2P33-201ENST00000402100 465 ntBASIC-0.93□□□□□ -2.56
HMGN4O00479 MIR1912-201ENST00000410389 80 ntBASIC-0.93□□□□□ -2.56
HMGN4O00479 RN7SKP142-201ENST00000411236 328 ntBASIC-0.93□□□□□ -2.56
HMGN4O00479 USP9YP21-201ENST00000420603 432 ntBASIC-0.93□□□□□ -2.56
HMGN4O00479 AC010598.1-201ENST00000510378 103 ntBASIC-0.93□□□□□ -2.56
HMGN4O00479 MIR548AD-201ENST00000584780 82 ntBASIC-0.93□□□□□ -2.56
HMGN4O00479 AC091948.2-201ENST00000636510 279 ntBASIC-0.93□□□□□ -2.56
HMGN4O00479 MIR148A-201ENST00000362215 68 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 RNU4-73P-201ENST00000363164 141 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 RNU6-641P-201ENST00000384006 107 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 RNU6-116P-201ENST00000384042 109 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 MT-TQ-201ENST00000387372 72 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 AC137499.1-201ENST00000427602 88 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.94□□□□□ -2.56
HMGN4O00479 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.94□□□□□ -2.56
HMGN4O00479 AC074198.2-201ENST00000508153 258 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 RNU7-156P-201ENST00000517214 74 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 AC022616.6-201ENST00000520479 119 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-0.94□□□□□ -2.56
HMGN4O00479 MIR4752-201ENST00000579672 72 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 MIR3681-201ENST00000580089 72 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 MIR4307-201ENST00000582802 84 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 uc_338.28-201ENST00000612082 187 ntBASIC-0.94□□□□□ -2.56
HMGN4O00479 AC022306.3-201ENST00000619930 550 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms