Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.6□□□□□ -2.15
RTCAO00442 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
RTCAO00442 ICE2P2-201ENST00000483823 2787 ntBASIC1.59□□□□□ -2.15
RTCAO00442 Y_RNA.39-201ENST00000362620 98 ntBASIC1.59□□□□□ -2.15
RTCAO00442 RNU6-797P-201ENST00000363101 109 ntBASIC1.59□□□□□ -2.15
RTCAO00442 RNU1-96P-201ENST00000364163 162 ntBASIC1.59□□□□□ -2.15
RTCAO00442 Y_RNA.361-201ENST00000365515 120 ntBASIC1.59□□□□□ -2.15
RTCAO00442 Y_RNA.460-201ENST00000384255 102 ntBASIC1.59□□□□□ -2.15
RTCAO00442 Y_RNA.535-201ENST00000384612 99 ntBASIC1.59□□□□□ -2.15
RTCAO00442 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.59□□□□□ -2.15
RTCAO00442 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.59□□□□□ -2.15
RTCAO00442 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
RTCAO00442 AC099513.1-201ENST00000490423 301 ntBASIC1.59□□□□□ -2.15
RTCAO00442 AC010598.1-201ENST00000510378 103 ntBASIC1.59□□□□□ -2.15
RTCAO00442 RNU4-77P-201ENST00000516692 156 ntBASIC1.59□□□□□ -2.15
RTCAO00442 AC023442.1-201ENST00000531247 422 ntBASIC1.59□□□□□ -2.15
RTCAO00442 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.59□□□□□ -2.15
RTCAO00442 PRR13P7-201ENST00000605538 430 ntBASIC1.59□□□□□ -2.15
RTCAO00442 AC010205.1-201ENST00000616668 449 ntBASIC1.59□□□□□ -2.15
RTCAO00442 AL121890.5-201ENST00000620848 304 ntBASIC1.59□□□□□ -2.15
RTCAO00442 AC006001.4-201ENST00000622243 395 ntBASIC1.59□□□□□ -2.15
RTCAO00442 uc_338.22-201ENST00000622722 187 ntBASIC1.59□□□□□ -2.15
RTCAO00442 AL160413.1-201ENST00000622780 310 ntBASIC1.59□□□□□ -2.15
RTCAO00442 MIR302D-201ENST00000362275 68 ntBASIC1.58□□□□□ -2.16
RTCAO00442 RNU6-1310P-201ENST00000384153 107 ntBASIC1.58□□□□□ -2.16
RTCAO00442 SNORD78.2-201ENST00000391076 69 ntBASIC1.58□□□□□ -2.16
RTCAO00442 RAB28P5-201ENST00000427490 651 ntBASIC1.58□□□□□ -2.16
RTCAO00442 FCF1P4-201ENST00000448326 183 ntBASIC1.58□□□□□ -2.16
RTCAO00442 RNU6-625P-201ENST00000459412 107 ntBASIC1.58□□□□□ -2.16
RTCAO00442 RPS26P45-201ENST00000471748 340 ntBASIC1.58□□□□□ -2.16
RTCAO00442 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.58□□□□□ -2.16
RTCAO00442 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.58□□□□□ -2.16
RTCAO00442 AL606534.2-204ENST00000635008 178 ntBASIC1.58□□□□□ -2.16
RTCAO00442 MIR3674-201ENST00000636576 68 ntBASIC1.58□□□□□ -2.16
RTCAO00442 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RTCAO00442 RNU6-1266P-201ENST00000362794 105 ntBASIC1.57□□□□□ -2.16
RTCAO00442 SNORD1A-201ENST00000364968 72 ntBASIC1.57□□□□□ -2.16
RTCAO00442 SNORD26-201ENST00000384147 75 ntBASIC1.57□□□□□ -2.16
RTCAO00442 Y_RNA.498-201ENST00000384460 102 ntBASIC1.57□□□□□ -2.16
RTCAO00442 SNORA26.9-201ENST00000391322 122 ntBASIC1.57□□□□□ -2.16
RTCAO00442 SDAD1P3-201ENST00000427380 333 ntBASIC1.57□□□□□ -2.16
RTCAO00442 SNORD65B-201ENST00000459126 73 ntBASIC1.57□□□□□ -2.16
RTCAO00442 SNORA25.15-201ENST00000516487 89 ntBASIC1.57□□□□□ -2.16
RTCAO00442 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RTCAO00442 AP002001.1-203ENST00000534002 267 ntBASIC1.57□□□□□ -2.16
RTCAO00442 AC084364.2-201ENST00000546924 395 ntBASIC1.57□□□□□ -2.16
RTCAO00442 AL137100.2-201ENST00000555786 315 ntBASIC1.57□□□□□ -2.16
RTCAO00442 AC092447.9-201ENST00000603395 144 ntBASIC1.57□□□□□ -2.16
RTCAO00442 U6.73-201ENST00000619194 103 ntBASIC1.57□□□□□ -2.16
RTCAO00442 AC090574.1-201ENST00000623186 233 ntBASIC1.57□□□□□ -2.16
RTCAO00442 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
RTCAO00442 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RTCAO00442 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RTCAO00442 Y_RNA.243-201ENST00000364481 109 ntBASIC1.56□□□□□ -2.16
RTCAO00442 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
RTCAO00442 RNY1P14-201ENST00000384426 108 ntBASIC1.56□□□□□ -2.16
RTCAO00442 MIR628-201ENST00000385229 95 ntBASIC1.56□□□□□ -2.16
RTCAO00442 MIR1253-201ENST00000408273 105 ntBASIC1.56□□□□□ -2.16
RTCAO00442 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.56□□□□□ -2.16
RTCAO00442 AC027119.1-201ENST00000440877 241 ntBASIC1.56□□□□□ -2.16
RTCAO00442 AC079140.2-201ENST00000506193 142 ntBASIC1.56□□□□□ -2.16
RTCAO00442 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.56□□□□□ -2.16
RTCAO00442 AC006600.1-201ENST00000572529 153 ntBASIC1.56□□□□□ -2.16
RTCAO00442 AP001485.1-201ENST00000604799 199 ntBASIC1.56□□□□□ -2.16
RTCAO00442 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.56□□□□□ -2.16
RTCAO00442 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RTCAO00442 U6.108-201ENST00000637764 58 ntBASIC1.56□□□□□ -2.16
RTCAO00442 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
RTCAO00442 RNY3P11-201ENST00000364153 102 ntBASIC1.55□□□□□ -2.16
RTCAO00442 RNU6-454P-201ENST00000364292 107 ntBASIC1.55□□□□□ -2.16
RTCAO00442 Y_RNA.230-201ENST00000364348 109 ntBASIC1.55□□□□□ -2.16
RTCAO00442 Y_RNA.526-201ENST00000384572 110 ntBASIC1.55□□□□□ -2.16
RTCAO00442 RNU6-417P-201ENST00000384712 107 ntBASIC1.55□□□□□ -2.16
RTCAO00442 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
RTCAO00442 MIR1302-11-201ENST00000408051 138 ntBASIC1.55□□□□□ -2.16
RTCAO00442 MIR1302-9-201ENST00000408365 138 ntBASIC1.55□□□□□ -2.16
RTCAO00442 MIR1302-10-201ENST00000408734 138 ntBASIC1.55□□□□□ -2.16
RTCAO00442 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.55□□□□□ -2.16
RTCAO00442 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.55□□□□□ -2.16
RTCAO00442 RNU7-169P-201ENST00000459456 61 ntBASIC1.55□□□□□ -2.16
RTCAO00442 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.55□□□□□ -2.16
RTCAO00442 RNU6-107P-201ENST00000516643 102 ntBASIC1.55□□□□□ -2.16
RTCAO00442 RNU7-128P-201ENST00000517247 62 ntBASIC1.55□□□□□ -2.16
RTCAO00442 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.55□□□□□ -2.16
RTCAO00442 MIR5188-201ENST00000583467 113 ntBASIC1.55□□□□□ -2.16
RTCAO00442 MIR502-201ENST00000606349 86 ntBASIC1.55□□□□□ -2.16
RTCAO00442 MIR1302-2-201ENST00000607096 138 ntBASIC1.55□□□□□ -2.16
RTCAO00442 SNORD58B-201ENST00000607313 66 ntBASIC1.55□□□□□ -2.16
RTCAO00442 AL359075.3-201ENST00000613288 217 ntBASIC1.55□□□□□ -2.16
RTCAO00442 AC090971.5-201ENST00000621102 293 ntBASIC1.55□□□□□ -2.16
RTCAO00442 U6.115-201ENST00000636045 103 ntBASIC1.55□□□□□ -2.16
RTCAO00442 U6.92-201ENST00000636464 89 ntBASIC1.55□□□□□ -2.16
RTCAO00442 AC100821.1-201ENST00000523153 2479 ntBASIC1.55□□□□□ -2.16
RTCAO00442 AC006026.1-201ENST00000444025 1803 ntBASIC1.54□□□□□ -2.16
RTCAO00442 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
RTCAO00442 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
RTCAO00442 Y_RNA.419-201ENST00000384041 102 ntBASIC1.54□□□□□ -2.16
RTCAO00442 RNA5SP475-201ENST00000410568 110 ntBASIC1.54□□□□□ -2.16
RTCAO00442 RN7SKP101-201ENST00000411376 320 ntBASIC1.54□□□□□ -2.16
RTCAO00442 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms