Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RN7SKP299-201ENST00000606679 301 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 DISC2.1-201ENST00000612827 205 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 MIR6788-201ENST00000618842 66 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 MTND5P26-201ENST00000426018 1752 ntBASIC0.54□□□□□ -2.32
UPK1AO00322 SNORA1B-201ENST00000362535 133 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 RNU6-1119P-201ENST00000384349 108 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 SNORA75.2-201ENST00000391138 150 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 SNORA75.3-201ENST00000391231 150 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 MTCYBP4-201ENST00000401524 249 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 MIR548J-201ENST00000408833 112 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 AC245047.8-201ENST00000456455 284 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 Y_RNA.665-201ENST00000516177 98 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 RNU6-1281P-201ENST00000516223 105 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 RNA5SP255-201ENST00000516370 107 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.53□□□□□ -2.32
UPK1AO00322 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.53□□□□□ -2.32
UPK1AO00322 MTND1P15-201ENST00000579262 949 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 MIR3684-201ENST00000579779 74 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 AC012557.2-201ENST00000605919 418 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 AC092954.2-201ENST00000609103 430 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 AC104465.1-201ENST00000611365 139 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 AL138726.1-201ENST00000614873 333 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 AL359880.1-201ENST00000621879 266 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 AC124864.2-201ENST00000624736 186 ntBASIC0.53□□□□□ -2.32
UPK1AO00322 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.53□□□□□ -2.32
UPK1AO00322 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
UPK1AO00322 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
UPK1AO00322 RNU6-259P-201ENST00000383999 107 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 SNORA20B-201ENST00000384220 132 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 Y_RNA.530-201ENST00000384587 101 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 MIR499A-201ENST00000384903 122 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 MIR605-201ENST00000385078 83 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 Y_RNA.615-201ENST00000410769 117 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.52□□□□□ -2.33
UPK1AO00322 RPS26P5-201ENST00000418544 335 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 AC018865.2-201ENST00000423631 129 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.52□□□□□ -2.33
UPK1AO00322 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 AL049830.1-201ENST00000468034 425 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 AC018710.1-201ENST00000506509 158 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 RNA5SP20-201ENST00000515976 84 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 RNU6-1278P-201ENST00000516130 107 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 RNU6-1291P-201ENST00000516591 104 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 RNU6-256P-201ENST00000516747 97 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.52□□□□□ -2.33
UPK1AO00322 AL117336.2-201ENST00000602435 335 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 AL162413.1-201ENST00000603198 110 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 AC004832.4-201ENST00000608952 331 ntBASIC0.52□□□□□ -2.33
UPK1AO00322 MIR891A-201ENST00000401237 79 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 AC243428.1-201ENST00000421099 264 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 USP9YP16-201ENST00000430287 407 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 AC233266.1-201ENST00000454518 96 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 USP9YP23-201ENST00000455085 407 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 SNORA70.12-201ENST00000516084 153 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 RNU6-405P-201ENST00000516637 110 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 Y_RNA.706-201ENST00000516933 99 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.51□□□□□ -2.33
UPK1AO00322 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.51□□□□□ -2.33
UPK1AO00322 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.51□□□□□ -2.33
UPK1AO00322 MIR5696-201ENST00000578474 85 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 AC091178.2-201ENST00000584401 117 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 PRELID3BP2-201ENST00000605362 201 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 AC242852.1-201ENST00000612151 96 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
UPK1AO00322 DLEU2_5.1-201ENST00000615567 84 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 AC244015.1-201ENST00000622301 99 ntBASIC0.51□□□□□ -2.33
UPK1AO00322 AC023934.1-201ENST00000574529 2389 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 Y_RNA.330-201ENST00000365230 109 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 Y_RNA.405-201ENST00000383979 100 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 Y_RNA.451-201ENST00000384200 100 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 RNU6-110P-201ENST00000384508 104 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 Y_RNA.524-201ENST00000384564 100 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 Y_RNA.561-201ENST00000384694 100 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
UPK1AO00322 ZNF885P-201ENST00000420174 1098 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.5□□□□□ -2.33
UPK1AO00322 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.5□□□□□ -2.33
UPK1AO00322 UQCRBP2-201ENST00000447827 297 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.5□□□□□ -2.33
UPK1AO00322 AC010486.3-201ENST00000511602 785 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 AC046134.1-201ENST00000514454 666 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 RNU6-1114P-201ENST00000516022 107 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 AC093023.1-201ENST00000547375 507 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 MIR151B-201ENST00000584249 96 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 AL353765.1-201ENST00000605514 183 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 AL096861.1-201ENST00000610899 123 ntBASIC0.5□□□□□ -2.33
UPK1AO00322 RNA5SP499-201ENST00000363982 119 ntBASIC0.49□□□□□ -2.33
UPK1AO00322 RNU6-1264P-201ENST00000383891 107 ntBASIC0.49□□□□□ -2.33
UPK1AO00322 RNU6-163P-201ENST00000384396 106 ntBASIC0.49□□□□□ -2.33
UPK1AO00322 Y_RNA.533-201ENST00000384596 114 ntBASIC0.49□□□□□ -2.33
UPK1AO00322 MIR520G-201ENST00000385064 90 ntBASIC0.49□□□□□ -2.33
UPK1AO00322 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.49□□□□□ -2.33
UPK1AO00322 MTND3P23-201ENST00000431980 347 ntBASIC0.49□□□□□ -2.33
UPK1AO00322 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.49□□□□□ -2.33
UPK1AO00322 MTND3P12-201ENST00000559068 328 ntBASIC0.49□□□□□ -2.33
UPK1AO00322 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.49□□□□□ -2.33
UPK1AO00322 AL391903.3-201ENST00000612158 163 ntBASIC0.49□□□□□ -2.33
UPK1AO00322 ZNF299P-201ENST00000406845 1804 ntBASIC0.49□□□□□ -2.33
UPK1AO00322 AC073544.1-201ENST00000600110 1595 ntBASIC0.49□□□□□ -2.33
UPK1AO00322 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms