Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SNORA69.1-201ENST00000390904 137 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 SNORA75.6-201ENST00000391318 127 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 RN7SKP200-201ENST00000410564 320 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 AC004965.1-201ENST00000413033 213 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 MRPL35P3-201ENST00000421557 364 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 AC245047.3-201ENST00000429428 127 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 SNRPGP13-201ENST00000442212 177 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 MRPS10P1-201ENST00000448483 130 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 Y_RNA.653-201ENST00000459091 95 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 RNU6-625P-201ENST00000459412 107 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 RNA5SP458-201ENST00000516188 119 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 MIR2355-201ENST00000517199 87 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 RNU6-902P-201ENST00000517212 91 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.29□□□□□ -2.2
PDLIM1O00151 AC015720.1-201ENST00000565251 277 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 AC022217.4-201ENST00000604389 163 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 AC133104.2-201ENST00000615272 193 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 AC006435.5-201ENST00000624486 112 ntBASIC1.29□□□□□ -2.2
PDLIM1O00151 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.29□□□□□ -2.2
PDLIM1O00151 Y_RNA.384-201ENST00000383909 102 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 SNORA20B-201ENST00000384220 132 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 RNU6-318P-201ENST00000384283 103 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 Y_RNA.474-201ENST00000384341 102 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 MRPL42P3-201ENST00000401492 326 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 MRPL35P1-201ENST00000404272 572 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 SNORD12B-201ENST00000410433 91 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 Y_RNA.605-201ENST00000410577 105 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 AL161935.2-201ENST00000414627 60 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 AP1B1P2-201ENST00000416196 106 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.28□□□□□ -2.2
PDLIM1O00151 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.28□□□□□ -2.2
PDLIM1O00151 RPS27P1-201ENST00000450552 247 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 RPS26P55-201ENST00000471178 356 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.28□□□□□ -2.2
PDLIM1O00151 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.28□□□□□ -2.2
PDLIM1O00151 SNORA40.9-201ENST00000515895 93 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 RNU6-470P-201ENST00000515954 104 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 AC019176.1-201ENST00000518519 225 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.28□□□□□ -2.2
PDLIM1O00151 MIR3937-201ENST00000580135 106 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 UBE2V2P2-201ENST00000587677 504 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 MIR8054-201ENST00000620877 86 ntBASIC1.28□□□□□ -2.2
PDLIM1O00151 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
PDLIM1O00151 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 RNU6-407P-201ENST00000365280 104 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 RNU6-1297P-201ENST00000384415 104 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 RNU6-440P-201ENST00000390882 105 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 AL355796.1-201ENST00000406706 323 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 BTF3P4-201ENST00000418852 495 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 MTND4P28-201ENST00000426217 387 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.27□□□□□ -2.21
PDLIM1O00151 RNU7-95P-201ENST00000459222 64 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 RNU7-169P-201ENST00000459456 61 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 RNU7-94P-201ENST00000459576 63 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.27□□□□□ -2.21
PDLIM1O00151 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.27□□□□□ -2.21
PDLIM1O00151 RNU7-4P-201ENST00000516961 62 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 RNU7-172P-201ENST00000517125 64 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 RNU7-128P-201ENST00000517247 62 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 AC144568.1-201ENST00000520139 137 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 AL442163.3-201ENST00000554110 156 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 DNAJC19P9-201ENST00000555084 351 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 RPL21P9-201ENST00000556149 474 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 MIR3684-201ENST00000579779 74 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 AC080078.3-201ENST00000605407 463 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 AL512598.1-201ENST00000610158 273 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 AC025253.1-201ENST00000613623 543 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
PDLIM1O00151 MIR3674-201ENST00000636576 68 ntBASIC1.27□□□□□ -2.21
PDLIM1O00151 RNU6-1301P-201ENST00000362724 104 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 SNORA72.1-201ENST00000363485 129 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 Y_RNA.259-201ENST00000364619 101 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 RNU6-1283P-201ENST00000365314 105 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 RNA5SP259-201ENST00000365541 109 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 Y_RNA.387-201ENST00000383918 102 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 RNU6-1031P-201ENST00000384773 107 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 MIR194-1-201ENST00000384892 85 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 MIR513A1-201ENST00000385138 129 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.26□□□□□ -2.21
PDLIM1O00151 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.26□□□□□ -2.21
PDLIM1O00151 MTCO3P10-201ENST00000455912 772 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 RPS29P29-201ENST00000456396 171 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 AC099513.1-201ENST00000490423 301 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.26□□□□□ -2.21
PDLIM1O00151 RNA5SP20-201ENST00000515976 84 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 SNORA31.10-201ENST00000516482 106 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 AC073413.2-201ENST00000604332 360 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 AL021879.1-201ENST00000611756 288 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 MTND4LP32-201ENST00000636111 270 ntBASIC1.26□□□□□ -2.21
PDLIM1O00151 AC018630.2-201ENST00000534866 2403 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 MIR378A-201ENST00000362177 66 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 MIR302D-201ENST00000362275 68 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 Y_RNA.140-201ENST00000363474 103 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 Y_RNA.314-201ENST00000365114 102 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 RNU6-926P-201ENST00000384075 107 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 RNU6-1310P-201ENST00000384153 107 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 RNU11-5P-201ENST00000391216 129 ntBASIC1.25□□□□□ -2.21
PDLIM1O00151 AL034345.1-201ENST00000407768 123 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms