Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RNU2-56P-201ENST00000516826 190 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 SNORA70.22-201ENST00000517160 124 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 CBX3P8-201ENST00000532412 525 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 MIR4790-201ENST00000577799 79 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.17□□□□□ -2.22
DDX39AO00148 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.17□□□□□ -2.22
DDX39AO00148 MIR6767-201ENST00000637302 66 ntBASIC1.17□□□□□ -2.22
DDX39AO00148 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
DDX39AO00148 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
DDX39AO00148 MTND5P16-201ENST00000460269 1703 ntBASIC1.16□□□□□ -2.22
DDX39AO00148 Y_RNA.318-201ENST00000365131 97 ntBASIC1.16□□□□□ -2.22
DDX39AO00148 RNU6-1080P-201ENST00000383982 107 ntBASIC1.16□□□□□ -2.22
DDX39AO00148 RNU6-842P-201ENST00000384269 107 ntBASIC1.16□□□□□ -2.22
DDX39AO00148 AL589823.1-201ENST00000429577 183 ntBASIC1.16□□□□□ -2.22
DDX39AO00148 SNORD5.1-201ENST00000458800 75 ntBASIC1.16□□□□□ -2.22
DDX39AO00148 RPS23P4-201ENST00000487908 423 ntBASIC1.16□□□□□ -2.22
DDX39AO00148 AC105758.1-201ENST00000506038 399 ntBASIC1.16□□□□□ -2.22
DDX39AO00148 AC018710.1-201ENST00000506509 158 ntBASIC1.16□□□□□ -2.22
DDX39AO00148 SNORA31.2-201ENST00000516019 134 ntBASIC1.16□□□□□ -2.22
DDX39AO00148 AL121579.1-201ENST00000555129 305 ntBASIC1.16□□□□□ -2.22
DDX39AO00148 AC136443.5-201ENST00000603741 370 ntBASIC1.16□□□□□ -2.22
DDX39AO00148 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.16□□□□□ -2.22
DDX39AO00148 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
DDX39AO00148 Y_RNA.3-201ENST00000362331 103 ntBASIC1.15□□□□□ -2.23
DDX39AO00148 Y_RNA.48-201ENST00000362710 103 ntBASIC1.15□□□□□ -2.23
DDX39AO00148 Y_RNA.191-201ENST00000363972 113 ntBASIC1.15□□□□□ -2.23
DDX39AO00148 SNORA20B-201ENST00000384220 132 ntBASIC1.15□□□□□ -2.23
DDX39AO00148 MTCYBP4-201ENST00000401524 249 ntBASIC1.15□□□□□ -2.23
DDX39AO00148 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.15□□□□□ -2.23
DDX39AO00148 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.15□□□□□ -2.23
DDX39AO00148 AC093783.1-201ENST00000612976 329 ntBASIC1.15□□□□□ -2.23
DDX39AO00148 U4.5-201ENST00000617137 123 ntBASIC1.15□□□□□ -2.23
DDX39AO00148 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.15□□□□□ -2.23
DDX39AO00148 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
DDX39AO00148 AC027514.1-201ENST00000588561 1603 ntBASIC1.15□□□□□ -2.23
DDX39AO00148 RNU6-407P-201ENST00000365280 104 ntBASIC1.14□□□□□ -2.23
DDX39AO00148 RNU6-424P-201ENST00000384367 105 ntBASIC1.14□□□□□ -2.23
DDX39AO00148 AL451046.2-201ENST00000403074 277 ntBASIC1.14□□□□□ -2.23
DDX39AO00148 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.14□□□□□ -2.23
DDX39AO00148 RNU6-322P-201ENST00000516010 103 ntBASIC1.14□□□□□ -2.23
DDX39AO00148 RNA5SP168-201ENST00000516642 112 ntBASIC1.14□□□□□ -2.23
DDX39AO00148 RNU7-28P-201ENST00000516759 62 ntBASIC1.14□□□□□ -2.23
DDX39AO00148 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.14□□□□□ -2.23
DDX39AO00148 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.14□□□□□ -2.23
DDX39AO00148 MIR4452-201ENST00000583004 71 ntBASIC1.14□□□□□ -2.23
DDX39AO00148 AC125232.2-201ENST00000592457 143 ntBASIC1.14□□□□□ -2.23
DDX39AO00148 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
DDX39AO00148 AC073544.1-201ENST00000600110 1595 ntBASIC1.13□□□□□ -2.23
DDX39AO00148 RNU4-38P-201ENST00000364472 129 ntBASIC1.13□□□□□ -2.23
DDX39AO00148 Y_RNA.516-201ENST00000384541 124 ntBASIC1.13□□□□□ -2.23
DDX39AO00148 AL355796.1-201ENST00000406706 323 ntBASIC1.13□□□□□ -2.23
DDX39AO00148 AC018865.2-201ENST00000423631 129 ntBASIC1.13□□□□□ -2.23
DDX39AO00148 AC091021.1-201ENST00000468051 388 ntBASIC1.13□□□□□ -2.23
DDX39AO00148 AC090049.2-201ENST00000550377 109 ntBASIC1.13□□□□□ -2.23
DDX39AO00148 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.13□□□□□ -2.23
DDX39AO00148 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.13□□□□□ -2.23
DDX39AO00148 HSPE1P19-201ENST00000603327 295 ntBASIC1.13□□□□□ -2.23
DDX39AO00148 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.13□□□□□ -2.23
DDX39AO00148 RNU4-79P-201ENST00000362764 141 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 Y_RNA.267-201ENST00000364679 109 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 RNU1-93P-201ENST00000364704 169 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 Y_RNA.453-201ENST00000384223 109 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 RNU6-376P-201ENST00000384731 106 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 MIR653-201ENST00000385279 96 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 SNORD41-201ENST00000386967 70 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 RNU6-910P-201ENST00000390844 107 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 RNU6-700P-201ENST00000391043 107 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 MIR190B-201ENST00000401119 79 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.12□□□□□ -2.23
DDX39AO00148 EIF1P2-201ENST00000428233 350 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 CALM2P4-201ENST00000430810 426 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 RPS29P25-201ENST00000481709 171 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 RNA5SP20-201ENST00000515976 84 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 RNU6-341P-201ENST00000516973 96 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 MIR5701-3-201ENST00000578890 82 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 MIR5701-1-201ENST00000585138 82 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 AL357312.1-201ENST00000603879 298 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 MIR5701-2-201ENST00000615634 82 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 AC012676.2-201ENST00000619258 186 ntBASIC1.12□□□□□ -2.23
DDX39AO00148 RNU4-40P-201ENST00000364351 143 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 Y_RNA.301-201ENST00000364990 103 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 Y_RNA.364-201ENST00000365532 101 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 SNORD116-4-201ENST00000384733 96 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 MIR329-1-201ENST00000385028 80 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 MRPL35P3-201ENST00000421557 364 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 RNU7-87P-201ENST00000459343 62 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 AC048334.1-201ENST00000477975 159 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 RNU4-49P-201ENST00000516080 140 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 RNU6-1278P-201ENST00000516130 107 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 RNU6-1016P-201ENST00000516689 94 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.11□□□□□ -2.23
DDX39AO00148 AP002004.2-201ENST00000531656 154 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 AC018462.2-201ENST00000605375 395 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 AC104260.1-201ENST00000616660 539 ntBASIC1.11□□□□□ -2.23
DDX39AO00148 AL391516.1-201ENST00000554380 2449 ntBASIC1.1□□□□□ -2.23
DDX39AO00148 SNORA27.1-201ENST00000362604 124 ntBASIC1.1□□□□□ -2.23
DDX39AO00148 MIR520E-201ENST00000384867 87 ntBASIC1.1□□□□□ -2.23
DDX39AO00148 U8.16-201ENST00000391279 133 ntBASIC1.1□□□□□ -2.23
DDX39AO00148 RNU6-1054P-201ENST00000411293 104 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms