Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 AL512598.1-201ENST00000610158 273 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 AC127459.3-201ENST00000624328 466 ntBASIC0.67□□□□□ -2.3
SMKR1H3BMG3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
SMKR1H3BMG3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
SMKR1H3BMG3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
SMKR1H3BMG3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
SMKR1H3BMG3 MIR410-201ENST00000362222 80 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 Y_RNA.41-201ENST00000362646 102 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 Y_RNA.48-201ENST00000362710 103 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 RNU6-831P-201ENST00000384548 107 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 MIR190B-201ENST00000401119 79 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 RNU4-62P-201ENST00000410125 130 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 AC006461.1-201ENST00000412637 326 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 RPS3AP1-201ENST00000413190 320 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 Z98949.2-201ENST00000440996 144 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.66□□□□□ -2.3
SMKR1H3BMG3 MTND1P17-201ENST00000448961 204 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 PCNPP5-201ENST00000452246 481 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 AC245047.8-201ENST00000456455 284 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 RNU7-90P-201ENST00000459216 62 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.66□□□□□ -2.3
SMKR1H3BMG3 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.66□□□□□ -2.3
SMKR1H3BMG3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.66□□□□□ -2.3
SMKR1H3BMG3 RNU6-548P-201ENST00000517083 115 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 AC136628.3-201ENST00000521868 290 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.66□□□□□ -2.3
SMKR1H3BMG3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.66□□□□□ -2.3
SMKR1H3BMG3 MIR5701-3-201ENST00000578890 82 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 MIR5701-1-201ENST00000585138 82 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 FAM106DP-201ENST00000586416 501 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 AL096861.1-201ENST00000610899 123 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 MIR6128-201ENST00000615528 109 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 MIR5701-2-201ENST00000615634 82 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 AC104260.1-201ENST00000616660 539 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 U6.115-201ENST00000636045 103 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
SMKR1H3BMG3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.66□□□□□ -2.3
SMKR1H3BMG3 Y_RNA.9-201ENST00000362354 101 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 RNU6-833P-201ENST00000363486 107 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 RNY4P14-201ENST00000363656 96 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 Y_RNA.364-201ENST00000365532 101 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 SNORD116-13-201ENST00000384408 92 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 Y_RNA.498-201ENST00000384460 102 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 SNORA75.2-201ENST00000391138 150 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 SNORA17.3-201ENST00000391159 129 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 SNORA75.3-201ENST00000391231 150 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 MIR873-201ENST00000401120 77 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 MIR891A-201ENST00000401237 79 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.65□□□□□ -2.31
SMKR1H3BMG3 AC233266.1-201ENST00000454518 96 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 RNU7-95P-201ENST00000459222 64 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 AC087343.1-201ENST00000477341 475 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.65□□□□□ -2.31
SMKR1H3BMG3 AC242852.1-201ENST00000612151 96 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 AL391903.3-201ENST00000612158 163 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
SMKR1H3BMG3 AL357075.2-201ENST00000614906 189 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 AC244015.1-201ENST00000622301 99 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 MIR3662-201ENST00000637030 95 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 CASC19-280ENST00000642102 1351 ntBASIC0.65□□□□□ -2.31
SMKR1H3BMG3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.64□□□□□ -2.31
SMKR1H3BMG3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SMKR1H3BMG3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.64□□□□□ -2.31
SMKR1H3BMG3 RNU4-41P-201ENST00000364426 143 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 RNA5SP126-201ENST00000365092 109 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 RNU6-117P-201ENST00000365415 107 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 MIR526A1-201ENST00000384897 85 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 MIR100-201ENST00000385259 80 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 UBE2V1P7-201ENST00000446395 340 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 RPS4XP11-201ENST00000446897 772 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 SUMO1P2-201ENST00000452524 304 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 SNORA70.12-201ENST00000516084 153 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 RNA5SP255-201ENST00000516370 107 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 AC018448.1-201ENST00000552843 316 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.64□□□□□ -2.31
SMKR1H3BMG3 AC005828.6-201ENST00000606610 232 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 AC100810.6-201ENST00000638068 285 ntBASIC0.64□□□□□ -2.31
SMKR1H3BMG3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
SMKR1H3BMG3 Y_RNA.157-201ENST00000363638 102 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 SNORD114-2-201ENST00000363953 78 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 RNU6-700P-201ENST00000391043 107 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
SMKR1H3BMG3 RNA5SP118-201ENST00000410385 109 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 RNA5SP475-201ENST00000410568 110 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 RNU6-1148P-201ENST00000410992 104 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 AP1B1P2-201ENST00000416196 106 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 AL139396.1-201ENST00000421137 167 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 RPEP5-201ENST00000441137 268 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 snoU13.15-201ENST00000459407 104 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 SNORD111.1-201ENST00000516421 86 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 RNU6-1096P-201ENST00000517089 102 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 RNU6-1116P-201ENST00000517269 99 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 AC106800.4-201ENST00000614905 153 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 AC027279.3-201ENST00000625055 122 ntBASIC0.63□□□□□ -2.31
SMKR1H3BMG3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SMKR1H3BMG3 SNORD114-7-201ENST00000362520 77 ntBASIC0.62□□□□□ -2.31
SMKR1H3BMG3 RNU6-879P-201ENST00000364328 108 ntBASIC0.62□□□□□ -2.31
SMKR1H3BMG3 Y_RNA.301-201ENST00000364990 103 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms