Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 MIR3674-201ENST00000636576 68 ntBASIC1.51□□□□□ -2.17
NPIPA3F8WFD2 MTND5P10-201ENST00000603719 1809 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 Y_RNA.187-201ENST00000363918 113 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 SNORA20B-201ENST00000384220 132 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 SNORA67.5-201ENST00000391036 107 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 AL355796.1-201ENST00000406706 323 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 RNU4-62P-201ENST00000410125 130 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 AC010154.1-201ENST00000425857 269 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 AC099799.1-201ENST00000439809 192 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 RNU7-34P-201ENST00000459394 64 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 RNU7-99P-201ENST00000516271 62 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 SNORA77B-201ENST00000578179 125 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 MIR4303-201ENST00000581299 66 ntBASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
NPIPA3F8WFD2 MIR126-201ENST00000362291 85 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 Y_RNA.146-201ENST00000363549 102 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 RNU6-407P-201ENST00000365280 104 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 RNU6-203P-201ENST00000384038 104 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 AC236972.2-201ENST00000434979 310 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 HSPE1P24-201ENST00000450782 238 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 Y_RNA.676-201ENST00000516393 96 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 RNU7-128P-201ENST00000517247 62 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 MIR4498-201ENST00000577599 66 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 MIR4795-201ENST00000584182 89 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 AC022217.4-201ENST00000604389 163 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 U2.1-201ENST00000618978 145 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 MIR8063-201ENST00000621930 81 ntBASIC1.49□□□□□ -2.17
NPIPA3F8WFD2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 RNU6-454P-201ENST00000364292 107 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 Y_RNA.428-201ENST00000384078 102 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 Y_RNA.463-201ENST00000384271 102 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 MIR628-201ENST00000385229 95 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 MTND4LP11-201ENST00000422184 280 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 MTATP6P23-201ENST00000440153 476 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 MRPS10P1-201ENST00000448483 130 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 RPS27P1-201ENST00000450552 247 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 AL442163.3-201ENST00000554110 156 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 AL929325.1-201ENST00000603096 117 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 AC006435.5-201ENST00000624486 112 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 U6.115-201ENST00000636045 103 ntBASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
NPIPA3F8WFD2 ICE2P2-201ENST00000483823 2787 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 RNU4-73P-201ENST00000363164 141 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 RNU6-961P-201ENST00000363893 105 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 RNU6-338P-201ENST00000383888 105 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 RNU6-1310P-201ENST00000384153 107 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 RPS26P45-201ENST00000471748 340 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 MTND3P22-201ENST00000510932 243 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 Y_RNA.661-201ENST00000516003 99 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 Y_RNA.675-201ENST00000516389 149 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 RNU7-172P-201ENST00000517125 64 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 SNORD116.3-201ENST00000517176 78 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 MIR4255-201ENST00000579351 72 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 AC073413.2-201ENST00000604332 360 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 snoU13.31-201ENST00000607291 104 ntBASIC1.47□□□□□ -2.17
NPIPA3F8WFD2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 MIR410-201ENST00000362222 80 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 RNU6-271P-201ENST00000363858 105 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 SNORD48-201ENST00000364953 64 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 RNU6-708P-201ENST00000384217 107 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 RN7SKP101-201ENST00000411376 320 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 AC245047.3-201ENST00000429428 127 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 CHEK2P4-201ENST00000450340 246 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 RNU7-152P-201ENST00000458982 64 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 RNA5SP20-201ENST00000515976 84 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 SNORA31.10-201ENST00000516482 106 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 AC023442.1-201ENST00000531247 422 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 MIR3684-201ENST00000579779 74 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 AC011476.5-201ENST00000615594 130 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 AC004467.1-201ENST00000615678 330 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 MIR8054-201ENST00000620877 86 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 AC138305.3-201ENST00000624988 240 ntBASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
NPIPA3F8WFD2 Y_RNA.4-201ENST00000362333 112 ntBASIC1.45□□□□□ -2.18
NPIPA3F8WFD2 SNORA27.1-201ENST00000362604 124 ntBASIC1.45□□□□□ -2.18
NPIPA3F8WFD2 RNY3P4-201ENST00000384428 101 ntBASIC1.45□□□□□ -2.18
NPIPA3F8WFD2 MRPL42P3-201ENST00000401492 326 ntBASIC1.45□□□□□ -2.18
NPIPA3F8WFD2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.45□□□□□ -2.18
NPIPA3F8WFD2 AC018865.2-201ENST00000423631 129 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms