Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NPIPB4C9JG80 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.05□□□□□ -2.08
NPIPB4C9JG80 Y_RNA.84-201ENST00000363011 104 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 Y_RNA.329-201ENST00000365209 107 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 Y_RNA.461-201ENST00000384263 103 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 RNU6-505P-201ENST00000384427 107 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 Y_RNA.556-201ENST00000384677 113 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 MIR215-201ENST00000384858 110 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 MIR144-201ENST00000384886 86 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 SNORA48.1-201ENST00000390879 135 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 MIR1302-6-201ENST00000408466 90 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 RNU2-61P-201ENST00000411069 191 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 AC099677.2-201ENST00000436385 175 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 RPS26P55-201ENST00000471178 356 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 TRBVB-201ENST00000477100 408 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 RNU6-570P-201ENST00000517051 105 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 AC024995.1-201ENST00000523014 93 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.05□□□□□ -2.08
NPIPB4C9JG80 AC023157.2-201ENST00000540596 141 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 AL359075.3-201ENST00000613288 217 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 AC010615.1-201ENST00000594254 1764 ntBASIC2.05□□□□□ -2.08
NPIPB4C9JG80 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
NPIPB4C9JG80 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
NPIPB4C9JG80 Y_RNA.376-201ENST00000365638 108 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 Y_RNA.541-201ENST00000384640 113 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 SNORA67.4-201ENST00000384688 142 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 Y_RNA.569-201ENST00000384749 103 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
NPIPB4C9JG80 RNU6-1248P-201ENST00000391096 64 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 RNU11-5P-201ENST00000391216 129 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 RNU6-1203P-201ENST00000410703 110 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 RPS15AP28-201ENST00000435088 386 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 HSPE1P13-201ENST00000451143 297 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
NPIPB4C9JG80 AC097462.1-201ENST00000514125 324 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 IGLV3-17-201ENST00000519099 244 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 MIR6840-201ENST00000611937 71 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 AC009831.4-201ENST00000620744 325 ntBASIC2.04□□□□□ -2.08
NPIPB4C9JG80 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.03□□□□□ -2.08
NPIPB4C9JG80 Y_RNA.124-201ENST00000363339 93 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 Y_RNA.136-201ENST00000363444 102 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 Y_RNA.144-201ENST00000363521 113 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 SNORA16B-201ENST00000364674 135 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 RNU6-196P-201ENST00000384315 107 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 SNORA48.3-201ENST00000391081 134 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 RNA5SP323-201ENST00000391094 133 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 RNA5SP501-201ENST00000410990 112 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
NPIPB4C9JG80 RNU6-1278P-201ENST00000516130 107 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 RNU1-142P-201ENST00000516682 145 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 AL161670.1-201ENST00000554348 137 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 DEFB117-201ENST00000602356 141 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 AC046143.2-201ENST00000609789 160 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.03□□□□□ -2.08
NPIPB4C9JG80 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
NPIPB4C9JG80 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
NPIPB4C9JG80 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
NPIPB4C9JG80 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.02□□□□□ -2.09
NPIPB4C9JG80 RNU1-22P-201ENST00000363334 158 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 RNU6-326P-201ENST00000365480 107 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 MIR17-201ENST00000385012 84 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 MIR568-201ENST00000385036 95 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 RNA5SP467-201ENST00000391274 118 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 AL512604.1-201ENST00000404812 257 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 RNU6-1186P-201ENST00000410429 97 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 RNU7-99P-201ENST00000516271 62 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 RNU6-1338P-201ENST00000516328 91 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 RNA5SP200-201ENST00000516360 103 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 RNU2-31P-201ENST00000516954 155 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 RNU7-172P-201ENST00000517125 64 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.02□□□□□ -2.09
NPIPB4C9JG80 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.02□□□□□ -2.09
NPIPB4C9JG80 MIR5094-201ENST00000578766 85 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 MIR5694-201ENST00000581190 76 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.02□□□□□ -2.09
NPIPB4C9JG80 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.02□□□□□ -2.09
NPIPB4C9JG80 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NPIPB4C9JG80 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NPIPB4C9JG80 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
NPIPB4C9JG80 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
NPIPB4C9JG80 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
NPIPB4C9JG80 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
NPIPB4C9JG80 MIRLET7G-201ENST00000362280 84 ntBASIC2.01□□□□□ -2.09
NPIPB4C9JG80 RNU6-1019P-201ENST00000364424 107 ntBASIC2.01□□□□□ -2.09
NPIPB4C9JG80 RNU6-514P-201ENST00000384208 107 ntBASIC2.01□□□□□ -2.09
NPIPB4C9JG80 SNORA8-201ENST00000384574 139 ntBASIC2.01□□□□□ -2.09
NPIPB4C9JG80 EBAG9P1-201ENST00000418955 543 ntBASIC2.01□□□□□ -2.09
NPIPB4C9JG80 AC069257.2-201ENST00000441819 155 ntBASIC2.01□□□□□ -2.09
NPIPB4C9JG80 AC010409.1-201ENST00000487382 476 ntBASIC2.01□□□□□ -2.09
NPIPB4C9JG80 RNVU1-2-201ENST00000516326 135 ntBASIC2.01□□□□□ -2.09
NPIPB4C9JG80 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.01□□□□□ -2.09
NPIPB4C9JG80 7SK.10-201ENST00000621414 298 ntBASIC2.01□□□□□ -2.09
NPIPB4C9JG80 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.01□□□□□ -2.09
NPIPB4C9JG80 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.01□□□□□ -2.09
NPIPB4C9JG80 AL136360.1-201ENST00000503377 1900 ntBASIC2.01□□□□□ -2.09
NPIPB4C9JG80 SNORA25.1-201ENST00000362326 128 ntBASIC2□□□□□ -2.09
NPIPB4C9JG80 Y_RNA.418-201ENST00000384029 102 ntBASIC2□□□□□ -2.09
NPIPB4C9JG80 RNU6-472P-201ENST00000384299 107 ntBASIC2□□□□□ -2.09
NPIPB4C9JG80 RNU6-463P-201ENST00000384340 107 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms