Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 Y_RNA.683-201ENST00000516508 93 ntBASIC0.93□□□□□ -2.26
VGLL3A8MV65 RNA5SP481-201ENST00000516814 122 ntBASIC0.93□□□□□ -2.26
VGLL3A8MV65 SNORA20.3-201ENST00000516880 132 ntBASIC0.93□□□□□ -2.26
VGLL3A8MV65 RNA5SP437-201ENST00000517249 129 ntBASIC0.93□□□□□ -2.26
VGLL3A8MV65 AC093023.1-201ENST00000547375 507 ntBASIC0.93□□□□□ -2.26
VGLL3A8MV65 AC090617.3-201ENST00000573670 475 ntBASIC0.93□□□□□ -2.26
VGLL3A8MV65 MZT1P2-201ENST00000604387 248 ntBASIC0.93□□□□□ -2.26
VGLL3A8MV65 AC211469.2-201ENST00000605461 205 ntBASIC0.93□□□□□ -2.26
VGLL3A8MV65 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.93□□□□□ -2.26
VGLL3A8MV65 MTND5P35-201ENST00000557537 1720 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
VGLL3A8MV65 RNU6-874P-201ENST00000362390 105 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 RNU6-1283P-201ENST00000365314 105 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 RNU6-417P-201ENST00000384712 107 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 RNU6-331P-201ENST00000384724 107 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 RNU6-360P-201ENST00000390944 104 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 RNU4-14P-201ENST00000410858 122 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 RNU2-64P-201ENST00000411315 191 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.92□□□□□ -2.26
VGLL3A8MV65 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.92□□□□□ -2.26
VGLL3A8MV65 EIF1P2-201ENST00000428233 350 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 HSPE1P9-201ENST00000440046 311 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 RNU7-87P-201ENST00000459343 62 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 HMGN1P7-201ENST00000491722 313 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 ACA64.5-201ENST00000516207 127 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 SCARNA16.2-201ENST00000516520 172 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 CYCSP23-201ENST00000519781 313 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 AC024995.1-201ENST00000523014 93 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 AC004584.2-201ENST00000570407 410 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 AC125232.2-201ENST00000592457 143 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 AC092794.2-201ENST00000620933 563 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 AC091895.1-201ENST00000624494 256 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 AL669831.3-213ENST00000636676 183 ntBASIC0.92□□□□□ -2.26
VGLL3A8MV65 RNU6-1266P-201ENST00000362794 105 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 SNORA33-201ENST00000363664 130 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.91□□□□□ -2.26
VGLL3A8MV65 RNU6-370P-201ENST00000411008 104 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 RNU6-1001P-201ENST00000411265 100 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 AL606490.4-201ENST00000423117 127 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 AC092423.1-201ENST00000430165 186 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 FTH1P12-201ENST00000432137 551 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 RPL23AP50-201ENST00000434149 455 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 UBE2V1P7-201ENST00000446395 340 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 MTND4P18-201ENST00000447010 465 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.91□□□□□ -2.26
VGLL3A8MV65 RPL26P26-201ENST00000480251 434 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 RPL17P19-201ENST00000489069 552 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 HMGN1P12-201ENST00000499125 195 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.91□□□□□ -2.26
VGLL3A8MV65 RNU6-1213P-201ENST00000517075 94 ntBASIC0.91□□□□□ -2.26
VGLL3A8MV65 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.9□□□□□ -2.27
VGLL3A8MV65 Y_RNA.164-201ENST00000363709 102 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 RNU6-1188P-201ENST00000363795 107 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 SNORD1A-201ENST00000364968 72 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 Y_RNA.390-201ENST00000383932 102 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 Y_RNA.474-201ENST00000384341 102 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 Y_RNA.557-201ENST00000384680 107 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 MIR329-1-201ENST00000385028 80 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 RNA5SP323-201ENST00000391094 133 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 RNA5SP467-201ENST00000391274 118 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 AC027119.1-201ENST00000440877 241 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 JTBP1-201ENST00000441314 247 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.9□□□□□ -2.27
VGLL3A8MV65 AC091144.1-201ENST00000519573 138 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 CYP3A52P-201ENST00000563326 91 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 AC022432.1-201ENST00000595739 310 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 SNORD114-21-201ENST00000606412 72 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 AL021879.1-201ENST00000611756 288 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 AL355073.2-201ENST00000612106 557 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.9□□□□□ -2.27
VGLL3A8MV65 MIR8070-201ENST00000616510 88 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.9□□□□□ -2.27
VGLL3A8MV65 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.9□□□□□ -2.27
VGLL3A8MV65 MIR302D-201ENST00000362275 68 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 RNU6-879P-201ENST00000364328 108 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 Y_RNA.358-201ENST00000365491 99 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 RNU6-1145P-201ENST00000384246 107 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 RNU6-310P-201ENST00000384655 107 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
VGLL3A8MV65 SNORA75.6-201ENST00000391318 127 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 Y_RNA.646-201ENST00000410980 101 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.89□□□□□ -2.27
VGLL3A8MV65 AC073910.1-201ENST00000445047 438 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 UQCRBP2-201ENST00000447827 297 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.89□□□□□ -2.27
VGLL3A8MV65 snoU13.27-201ENST00000459278 104 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 AC087343.1-201ENST00000477341 475 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 AC093852.1-201ENST00000503587 266 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.89□□□□□ -2.27
VGLL3A8MV65 RNU6-107P-201ENST00000516643 102 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 AC022868.1-201ENST00000517767 391 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 APOOP3-201ENST00000536787 586 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 AL137100.2-201ENST00000555786 315 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 FRG2DP-202ENST00000566967 323 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 SNORA77B-201ENST00000578179 125 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 MIR5690-201ENST00000583739 73 ntBASIC0.89□□□□□ -2.27
VGLL3A8MV65 AC113139.1-201ENST00000605049 239 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms