Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 RNY4P6-201ENST00000363667 96 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 RNU5E-7P-201ENST00000365290 117 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 SNORA51.10-201ENST00000384418 136 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 RNU6-692P-201ENST00000384496 107 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 MIR1285-2-201ENST00000408311 88 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 RNU6-293P-201ENST00000411259 106 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 AL353572.1-201ENST00000442490 417 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 AL500527.2-201ENST00000454105 95 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-1.49□□□□□ -2.65
HFM1A2PYH4 Y_RNA.689-201ENST00000516589 107 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 AC115989.2-201ENST00000578640 563 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 AC016597.2-201ENST00000613256 341 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 uc_338.19-201ENST00000616808 99 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC-1.49□□□□□ -2.65
HFM1A2PYH4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.5□□□□□ -2.65
HFM1A2PYH4 MTND4P9-201ENST00000507819 1346 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 RNU4-16P-201ENST00000364737 141 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 MIR452-201ENST00000385020 85 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 MIR204-201ENST00000385200 110 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 MIR136-201ENST00000385207 82 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 RNU6-796P-201ENST00000391086 107 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 MTCO3P40-201ENST00000392516 676 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 MIR208B-201ENST00000401172 77 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 MTCO2P33-201ENST00000402100 465 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 MTCO1P17-201ENST00000411522 491 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 RNU7-73P-201ENST00000458743 63 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 AC021146.6-201ENST00000514659 117 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 RNU2-56P-201ENST00000516826 190 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 RNU6-677P-201ENST00000516914 101 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 PCMTD1P2-201ENST00000565017 355 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 MTND1P8-201ENST00000571424 950 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 MIR4666A-201ENST00000580160 79 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 MIR4499-201ENST00000584834 69 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 U7.6-201ENST00000610841 64 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 AL359547.2-201ENST00000615810 418 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 U4.7-201ENST00000638126 106 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 AC132825.7-201ENST00000638744 335 ntBASIC-1.5□□□□□ -2.65
HFM1A2PYH4 RNU6-552P-201ENST00000362869 119 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 SNORA27.3-201ENST00000364937 134 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 RNU6-1179P-201ENST00000384667 107 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 MIR215-201ENST00000384858 110 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 RNU2-54P-201ENST00000410299 190 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 AC008134.1-201ENST00000420943 193 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 PIGPP3-201ENST00000425307 415 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 TRIM60P10Y-201ENST00000425589 751 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 RNU6-123P-201ENST00000516163 102 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 AC109479.2-201ENST00000517842 174 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.51□□□□□ -2.65
HFM1A2PYH4 AC068587.5-201ENST00000528506 175 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 AC174048.1-201ENST00000603389 144 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 OR4H6P-202ENST00000603819 340 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 AC027279.3-201ENST00000625055 122 ntBASIC-1.51□□□□□ -2.65
HFM1A2PYH4 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 RNU6-137P-201ENST00000363680 108 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 RNU6-353P-201ENST00000364266 108 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 RNU6-744P-201ENST00000365557 107 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 RNU6-47P-201ENST00000383866 107 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 RNU6-1316P-201ENST00000384242 108 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 SNORD28-201ENST00000384706 75 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 AC104563.1-201ENST00000476147 376 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 AC010486.2-201ENST00000505572 483 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 RN7SKP19-201ENST00000516016 252 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 RNU6-58P-201ENST00000517143 103 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 SNORA70.25-201ENST00000612741 95 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 snoZ196.1-201ENST00000625269 89 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 AC093726.3-201ENST00000637588 150 ntBASIC-1.52□□□□□ -2.65
HFM1A2PYH4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-1.53□□□□□ -2.65
HFM1A2PYH4 U8.6-201ENST00000364939 135 ntBASIC-1.53□□□□□ -2.65
HFM1A2PYH4 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.53□□□□□ -2.65
HFM1A2PYH4 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.53□□□□□ -2.65
HFM1A2PYH4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.53□□□□□ -2.65
HFM1A2PYH4 RNU6-221P-201ENST00000459541 99 ntBASIC-1.53□□□□□ -2.65
HFM1A2PYH4 RPL23AP75-201ENST00000491601 451 ntBASIC-1.53□□□□□ -2.65
HFM1A2PYH4 AP000753.3-201ENST00000604083 169 ntBASIC-1.53□□□□□ -2.65
HFM1A2PYH4 AP001330.5-201ENST00000607176 411 ntBASIC-1.53□□□□□ -2.65
HFM1A2PYH4 AC084368.1-201ENST00000620935 65 ntBASIC-1.53□□□□□ -2.65
HFM1A2PYH4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-1.53□□□□□ -2.65
HFM1A2PYH4 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-1.54□□□□□ -2.66
HFM1A2PYH4 AC004386.2-201ENST00000441858 148 ntBASIC-1.54□□□□□ -2.66
HFM1A2PYH4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC-1.54□□□□□ -2.66
HFM1A2PYH4 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.54□□□□□ -2.66
HFM1A2PYH4 MIR378D2-201ENST00000580636 98 ntBASIC-1.54□□□□□ -2.66
HFM1A2PYH4 MIR5006-201ENST00000583027 110 ntBASIC-1.54□□□□□ -2.66
HFM1A2PYH4 AC005332.6-201ENST00000613178 446 ntBASIC-1.54□□□□□ -2.66
HFM1A2PYH4 SNORA1B-201ENST00000362535 133 ntBASIC-1.55□□□□□ -2.66
HFM1A2PYH4 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.55□□□□□ -2.66
HFM1A2PYH4 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.55□□□□□ -2.66
HFM1A2PYH4 MIR876-201ENST00000401147 81 ntBASIC-1.55□□□□□ -2.66
HFM1A2PYH4 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.55□□□□□ -2.66
HFM1A2PYH4 AC114491.1-201ENST00000416095 246 ntBASIC-1.55□□□□□ -2.66
HFM1A2PYH4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.55□□□□□ -2.66
HFM1A2PYH4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.55□□□□□ -2.66
HFM1A2PYH4 AC074290.1-201ENST00000448883 135 ntBASIC-1.55□□□□□ -2.66
HFM1A2PYH4 SNORD123-201ENST00000459473 70 ntBASIC-1.55□□□□□ -2.66
HFM1A2PYH4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.55□□□□□ -2.66
HFM1A2PYH4 AC006441.5-201ENST00000612680 209 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms