Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 RNY4P28-201ENST00000365281 93 ntBASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 SNORA20B-201ENST00000384220 132 ntBASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 Y_RNA.785-201ENST00000384290 109 ntBASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 AL355796.1-201ENST00000406706 323 ntBASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 AC009238.1-201ENST00000442165 424 ntBASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 AC009237.6-201ENST00000446969 424 ntBASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 SNORD65B-201ENST00000459126 73 ntBASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 Y_RNA.638-201ENST00000459374 113 ntBASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 SNORD116-28-201ENST00000516123 91 ntBASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 AC073349.3-201ENST00000617616 186 ntBASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 AC010297.1-201ENST00000623948 149 ntBASIC2.84□□□□□ -1.95
PTPDC1A2A3K4 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
PTPDC1A2A3K4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 RNU6-1272P-201ENST00000362776 107 ntBASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 Y_RNA.297-201ENST00000364950 91 ntBASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 MIR873-201ENST00000401120 77 ntBASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 SRIP3-201ENST00000413200 219 ntBASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 AL121890.1-201ENST00000435457 205 ntBASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 RN7SL636P-201ENST00000497504 294 ntBASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 SNORA4.4-201ENST00000515921 135 ntBASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 RNA5SP24-201ENST00000516478 95 ntBASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 AC136628.3-201ENST00000521868 290 ntBASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 snoU18.1-201ENST00000629629 71 ntBASIC2.83□□□□□ -1.96
PTPDC1A2A3K4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 MIR21-201ENST00000362134 72 ntBASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 RNU6-271P-201ENST00000363858 105 ntBASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 RNU6-1240P-201ENST00000365155 104 ntBASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 AL359511.1-201ENST00000402970 211 ntBASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 Y_RNA.626-201ENST00000411288 95 ntBASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 HMGN2P35-201ENST00000412164 270 ntBASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 MTND5P15-201ENST00000434246 349 ntBASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 RPL23AP7-203ENST00000449021 469 ntBASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 PRELID3BP1-201ENST00000457142 540 ntBASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 AC011921.3-201ENST00000605540 361 ntBASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 AC006435.5-201ENST00000624486 112 ntBASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PTPDC1A2A3K4 Y_RNA.29-201ENST00000362570 113 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 SNORA27.1-201ENST00000362604 124 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 Y_RNA.368-201ENST00000365547 113 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 SNORA70B-201ENST00000384210 135 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 Y_RNA.456-201ENST00000384232 111 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 RNA5SP181-201ENST00000410246 98 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 RNU4-53P-201ENST00000410828 140 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 BTF3P11-201ENST00000426582 477 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 AL138752.1-201ENST00000452964 351 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 AC234781.5-201ENST00000508429 271 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 RNU6-182P-201ENST00000516970 105 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 SNORA81.3-201ENST00000517283 198 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 AC067747.1-201ENST00000608026 250 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 AL078604.3-201ENST00000615580 211 ntBASIC2.81□□□□□ -1.96
PTPDC1A2A3K4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 MIR340-201ENST00000362125 95 ntBASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 MIR411-201ENST00000362239 96 ntBASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 Y_RNA.124-201ENST00000363339 93 ntBASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 RNU6-801P-201ENST00000364087 105 ntBASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 RNU1-51P-201ENST00000365345 176 ntBASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 RNU6-211P-201ENST00000384047 107 ntBASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 RNU6-855P-201ENST00000410395 104 ntBASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 AC016909.1-201ENST00000415916 166 ntBASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 AL135790.2-201ENST00000437701 267 ntBASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 RNU6-856P-201ENST00000516959 98 ntBASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 AC087441.2-201ENST00000529141 262 ntBASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 AC021269.2-201ENST00000532318 330 ntBASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PTPDC1A2A3K4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 Y_RNA.310-201ENST00000365063 113 ntBASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 Y_RNA.341-201ENST00000365341 102 ntBASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 SNORA3.2-201ENST00000408221 125 ntBASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 AC009310.1-201ENST00000414414 451 ntBASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 HSPE1P13-201ENST00000451143 297 ntBASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 Y_RNA.637-201ENST00000459424 114 ntBASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 AL008718.3-201ENST00000610217 321 ntBASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 AL137847.3-201ENST00000611521 109 ntBASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
PTPDC1A2A3K4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PTPDC1A2A3K4 RNU6-763P-201ENST00000390865 106 ntBASIC2.78□□□□□ -1.96
PTPDC1A2A3K4 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.78□□□□□ -1.96
PTPDC1A2A3K4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.78□□□□□ -1.96
PTPDC1A2A3K4 Y_RNA.644-201ENST00000459006 113 ntBASIC2.78□□□□□ -1.96
PTPDC1A2A3K4 RPS26P55-201ENST00000471178 356 ntBASIC2.78□□□□□ -1.96
PTPDC1A2A3K4 YWHAEP4-201ENST00000505390 198 ntBASIC2.78□□□□□ -1.96
PTPDC1A2A3K4 Y_RNA.674-201ENST00000516362 113 ntBASIC2.78□□□□□ -1.96
PTPDC1A2A3K4 AP005660.1-201ENST00000522972 293 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms