Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.5□□□□□ -1.85
GPC6Q9Y625 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
GPC6Q9Y625 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
GPC6Q9Y625 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
GPC6Q9Y625 Y_RNA.267-201ENST00000364679 109 ntBASIC3.5□□□□□ -1.85
GPC6Q9Y625 SNORA14A-201ENST00000364773 135 ntBASIC3.5□□□□□ -1.85
GPC6Q9Y625 RNU6-805P-201ENST00000365643 106 ntBASIC3.5□□□□□ -1.85
GPC6Q9Y625 MIR591-201ENST00000385290 95 ntBASIC3.5□□□□□ -1.85
GPC6Q9Y625 SNORD72-201ENST00000390994 80 ntBASIC3.5□□□□□ -1.85
GPC6Q9Y625 FO393413.1-201ENST00000402892 195 ntBASIC3.5□□□□□ -1.85
GPC6Q9Y625 AL590004.2-201ENST00000404787 371 ntBASIC3.5□□□□□ -1.85
GPC6Q9Y625 AL031121.1-201ENST00000406553 254 ntBASIC3.5□□□□□ -1.85
GPC6Q9Y625 RNU6-554P-201ENST00000410466 106 ntBASIC3.5□□□□□ -1.85
GPC6Q9Y625 AC024614.2-201ENST00000577584 372 ntBASIC3.5□□□□□ -1.85
GPC6Q9Y625 SNORA62.6-201ENST00000606322 83 ntBASIC3.5□□□□□ -1.85
GPC6Q9Y625 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.5□□□□□ -1.85
GPC6Q9Y625 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
GPC6Q9Y625 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
GPC6Q9Y625 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
GPC6Q9Y625 SNORD61-201ENST00000384252 73 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
GPC6Q9Y625 RNA5SP293-201ENST00000410527 113 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 RNU6-1328P-201ENST00000410938 106 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 RPS15AP28-201ENST00000435088 386 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 RN7SL442P-201ENST00000473804 320 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 HMGN1P7-201ENST00000491722 313 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 RN7SL323P-201ENST00000494712 295 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 Y_RNA.666-201ENST00000516187 112 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 RNU6-1149P-201ENST00000516810 97 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.49□□□□□ -1.85
GPC6Q9Y625 MIR1254-2-201ENST00000579553 63 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.49□□□□□ -1.85
GPC6Q9Y625 VN1R85P-201ENST00000601587 426 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 AC107294.3-201ENST00000609211 526 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.49□□□□□ -1.85
GPC6Q9Y625 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
GPC6Q9Y625 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
GPC6Q9Y625 AC068647.1-201ENST00000489539 2265 ntBASIC3.49□□□□□ -1.85
GPC6Q9Y625 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GPC6Q9Y625 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GPC6Q9Y625 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
GPC6Q9Y625 RNU1-23P-201ENST00000363361 144 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 Y_RNA.253-201ENST00000364562 112 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 RNU6-1107P-201ENST00000364817 104 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 RNU6-106P-201ENST00000384405 107 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 SNORD12C-201ENST00000386307 89 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 MIR802-201ENST00000390235 94 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 SNORA57.1-201ENST00000391227 145 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 CALM2P4-201ENST00000430810 426 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 AC018634.1-201ENST00000437554 401 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC6Q9Y625 AC010401.1-201ENST00000463867 348 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 RNU6-693P-201ENST00000516134 107 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 RNA5SP380-201ENST00000517190 98 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 AC022695.1-201ENST00000522089 237 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC6Q9Y625 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC6Q9Y625 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC6Q9Y625 AC007012.1-201ENST00000567192 175 ntBASIC3.48□□□□□ -1.85
GPC6Q9Y625 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.48□□□□□ -1.85
GPC6Q9Y625 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
GPC6Q9Y625 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
GPC6Q9Y625 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GPC6Q9Y625 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
GPC6Q9Y625 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GPC6Q9Y625 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
GPC6Q9Y625 SNORA73.2-201ENST00000364946 201 ntBASIC3.47□□□□□ -1.85
GPC6Q9Y625 RNA5SP424-201ENST00000390988 115 ntBASIC3.47□□□□□ -1.85
GPC6Q9Y625 RNU1-101P-201ENST00000391171 127 ntBASIC3.47□□□□□ -1.85
GPC6Q9Y625 SNORA48.8-201ENST00000391324 134 ntBASIC3.47□□□□□ -1.85
GPC6Q9Y625 RN7SKP27-201ENST00000410684 333 ntBASIC3.47□□□□□ -1.85
GPC6Q9Y625 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.47□□□□□ -1.85
GPC6Q9Y625 AC060773.1-201ENST00000421698 310 ntBASIC3.47□□□□□ -1.85
GPC6Q9Y625 AL139247.1-201ENST00000422768 325 ntBASIC3.47□□□□□ -1.85
GPC6Q9Y625 AC110768.1-201ENST00000509222 400 ntBASIC3.47□□□□□ -1.85
GPC6Q9Y625 SCARNA3-201ENST00000517097 143 ntBASIC3.47□□□□□ -1.85
GPC6Q9Y625 SCARNA11.3-201ENST00000517276 130 ntBASIC3.47□□□□□ -1.85
GPC6Q9Y625 MIR5739-201ENST00000619803 80 ntBASIC3.47□□□□□ -1.85
GPC6Q9Y625 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GPC6Q9Y625 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
GPC6Q9Y625 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
GPC6Q9Y625 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
GPC6Q9Y625 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.47□□□□□ -1.85
GPC6Q9Y625 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
GPC6Q9Y625 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
GPC6Q9Y625 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.46□□□□□ -1.86
GPC6Q9Y625 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
GPC6Q9Y625 Y_RNA.366-201ENST00000365540 102 ntBASIC3.46□□□□□ -1.86
GPC6Q9Y625 CD24P4-201ENST00000382840 243 ntBASIC3.46□□□□□ -1.86
GPC6Q9Y625 RN7SKP284-201ENST00000411002 343 ntBASIC3.46□□□□□ -1.86
GPC6Q9Y625 AC123900.1-201ENST00000420390 96 ntBASIC3.46□□□□□ -1.86
GPC6Q9Y625 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.46□□□□□ -1.86
GPC6Q9Y625 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.46□□□□□ -1.86
GPC6Q9Y625 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.46□□□□□ -1.86
GPC6Q9Y625 RNA5SP236-201ENST00000516169 116 ntBASIC3.46□□□□□ -1.86
GPC6Q9Y625 RNU6-856P-201ENST00000516959 98 ntBASIC3.46□□□□□ -1.86
GPC6Q9Y625 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.46□□□□□ -1.86
GPC6Q9Y625 U2.20-201ENST00000613956 192 ntBASIC3.46□□□□□ -1.86
GPC6Q9Y625 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
GPC6Q9Y625 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 176.1 ms