Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 U8.18-201ENST00000459285 133 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 RN7SL323P-201ENST00000494712 295 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 AC011406.1-201ENST00000512440 370 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 RNU7-99P-201ENST00000516271 62 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 U2.20-201ENST00000613956 192 ntBASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.58□□□□□ -1.84
HRH3Q9Y5N1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 RNA5SP139-201ENST00000364340 117 ntBASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 Y_RNA.253-201ENST00000364562 112 ntBASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 Y_RNA.549-201ENST00000384657 102 ntBASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 RN7SKP156-201ENST00000410308 342 ntBASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 RPL39P34-201ENST00000477141 156 ntBASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 PHBP14-201ENST00000512887 367 ntBASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 Y_RNA.666-201ENST00000516187 112 ntBASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 AC008507.4-201ENST00000585464 127 ntBASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 AL355596.1-201ENST00000565399 3996 ntBASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HRH3Q9Y5N1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 RNU1-72P-201ENST00000362976 153 ntBASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 RNU1-18P-201ENST00000363062 164 ntBASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 RNU1-96P-201ENST00000364163 162 ntBASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 MIR218-1-201ENST00000384999 110 ntBASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 SNORA26.2-201ENST00000390922 122 ntBASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 AC093259.1-201ENST00000509755 300 ntBASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 RNA5SP208-201ENST00000516156 78 ntBASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 RNU7-70P-201ENST00000516941 66 ntBASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 SCARNA3-201ENST00000517097 143 ntBASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 AC068657.1-201ENST00000520807 306 ntBASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 AC087499.8-201ENST00000578406 226 ntBASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HRH3Q9Y5N1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 MIR126-201ENST00000362291 85 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 Y_RNA.198-201ENST00000364013 98 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 RNA5SP387-201ENST00000364226 106 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 SNORA14A-201ENST00000364773 135 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 SNORD77.3-201ENST00000391113 65 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 MICF-203ENST00000432679 129 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 AC244505.4-201ENST00000434905 287 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 SSXP5-201ENST00000443473 287 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 RN7SL93P-201ENST00000463035 293 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 RNU6-1291P-201ENST00000516591 104 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 AL358944.1-201ENST00000528537 144 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 SNORA51-201ENST00000606420 132 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 RNU6-94P-201ENST00000607728 107 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 AL359075.3-201ENST00000613288 217 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 Z83843.1-201ENST00000604070 3685 ntBASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HRH3Q9Y5N1 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 ZNF271P-202ENST00000465539 1970 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 MFSD8-236ENST00000641509 4050 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 RNU6-640P-201ENST00000363693 105 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 Y_RNA.267-201ENST00000364679 109 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 Y_RNA.323-201ENST00000365157 109 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 MIR449B-201ENST00000384995 97 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 MIR1251-201ENST00000408552 70 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 ARF4P2-201ENST00000430209 526 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 CYCSP35-201ENST00000451978 304 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 RN7SL330P-201ENST00000469709 307 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 RN7SL271P-201ENST00000487601 295 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 IGKV3-31-201ENST00000523109 329 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 MIR4474-201ENST00000579189 78 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 MIR3199-1-201ENST00000582434 88 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 AL591424.2-201ENST00000617023 128 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 AC110079.1-202ENST00000635213 138 ntBASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HRH3Q9Y5N1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
HRH3Q9Y5N1 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HRH3Q9Y5N1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms