Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 MIR1255B1-201ENST00000636325 63 ntBASIC4.03□□□□□ -1.76
PCDHB3Q9Y5E6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHB3Q9Y5E6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHB3Q9Y5E6 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHB3Q9Y5E6 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 MIR372-201ENST00000362225 67 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-219P-201ENST00000364728 107 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 SNORA14A-201ENST00000364773 135 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 SNORD115-35-201ENST00000365122 82 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 MIR522-201ENST00000385071 87 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-733P-201ENST00000410759 104 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 FTH1P12-201ENST00000432137 551 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 RPS15AP28-201ENST00000435088 386 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 MIR4765-201ENST00000585007 77 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 AC006130.2-201ENST00000586202 326 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 MIR1248-201ENST00000629190 106 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 MIR4662A-201ENST00000637499 67 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 AC002546.1-201ENST00000588041 2504 ntBASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHB3Q9Y5E6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-363P-201ENST00000362895 105 ntBASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-60P-201ENST00000364792 103 ntBASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 MIR1179-201ENST00000408703 91 ntBASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 HMGN2P34-201ENST00000437647 269 ntBASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-965P-201ENST00000516721 96 ntBASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 RNU7-128P-201ENST00000517247 62 ntBASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 AC091544.4-201ENST00000555268 342 ntBASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 AL360157.1-201ENST00000565962 87 ntBASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 MIR4429-201ENST00000580105 73 ntBASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 MIR4777-201ENST00000583710 86 ntBASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 MIR6867-201ENST00000610636 67 ntBASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 MIR6875-201ENST00000617506 72 ntBASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PCDHB3Q9Y5E6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-661P-201ENST00000362409 107 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 SNORD115-19-201ENST00000363098 82 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 SNORD115-18-201ENST00000363293 82 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-776P-201ENST00000364403 104 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 SNORD115-17-201ENST00000364612 82 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 Y_RNA.267-201ENST00000364679 109 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-1022P-201ENST00000365049 104 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 Y_RNA.547-201ENST00000384654 119 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 AP000567.1-201ENST00000406413 156 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 SNORA71B-202ENST00000439232 272 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 RNA5SP112-201ENST00000515937 99 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 RNU7-99P-201ENST00000516271 62 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-856P-201ENST00000516959 98 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 RNU1-45P-201ENST00000517191 141 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 HSPE1P19-201ENST00000603327 295 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 Y_RNA.773-201ENST00000607168 90 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 AC091932.4-201ENST00000623386 200 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 AL353746.1-201ENST00000566293 6881 ntBASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PCDHB3Q9Y5E6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 RNU4-16P-201ENST00000364737 141 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 Y_RNA.351-201ENST00000365436 96 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-409P-201ENST00000384114 104 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-788P-201ENST00000390967 104 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 RNU11-5P-201ENST00000391216 129 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 PTMAP2-201ENST00000397627 327 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6ATAC-201ENST00000408749 126 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 AL445646.1-201ENST00000431784 216 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 RNU2-11P-201ENST00000459191 187 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 RN7SL604P-201ENST00000492589 296 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 SNORA4.4-201ENST00000515921 135 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-341P-201ENST00000516973 96 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 RNU6-586P-201ENST00000517265 104 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 AL358944.1-201ENST00000528537 144 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 MIR4644-201ENST00000579929 84 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 MIR6079-201ENST00000635807 62 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 MIR203B-201ENST00000636080 86 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 AC091304.10-201ENST00000641554 121 ntBASIC3.99□□□□□ -1.77
PCDHB3Q9Y5E6 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms