Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 AC019176.2-201ENST00000611579 315 ntBASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SF3B6Q9Y3B4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 RNA5SP387-201ENST00000364226 106 ntBASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 RNY3P5-201ENST00000384127 102 ntBASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 RNU6-768P-201ENST00000384683 107 ntBASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 SNORD37.2-201ENST00000391075 66 ntBASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 RPL30P13-201ENST00000418873 348 ntBASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 snoU13.22-201ENST00000459428 104 ntBASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 MIR4444-1-201ENST00000581696 74 ntBASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 MIR4444-2-201ENST00000584390 74 ntBASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 AL049861.1-201ENST00000603130 150 ntBASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 uc_338.1-201ENST00000612113 180 ntBASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 U6.73-201ENST00000619194 103 ntBASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 AC010332.2-201ENST00000613083 1904 ntBASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SF3B6Q9Y3B4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SF3B6Q9Y3B4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
SF3B6Q9Y3B4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
SF3B6Q9Y3B4 SNORA25B-201ENST00000365507 128 ntBASIC2.9□□□□□ -1.95
SF3B6Q9Y3B4 RNU6-1081P-201ENST00000384537 107 ntBASIC2.9□□□□□ -1.95
SF3B6Q9Y3B4 Y_RNA.521-201ENST00000384560 114 ntBASIC2.9□□□□□ -1.95
SF3B6Q9Y3B4 SNORA48.8-201ENST00000391324 134 ntBASIC2.9□□□□□ -1.95
SF3B6Q9Y3B4 AL512604.1-201ENST00000404812 257 ntBASIC2.9□□□□□ -1.95
SF3B6Q9Y3B4 RNU6-1186P-201ENST00000410429 97 ntBASIC2.9□□□□□ -1.95
SF3B6Q9Y3B4 RPS29P21-201ENST00000496272 170 ntBASIC2.9□□□□□ -1.95
SF3B6Q9Y3B4 AC112693.2-201ENST00000556538 232 ntBASIC2.9□□□□□ -1.95
SF3B6Q9Y3B4 LARP7P3-201ENST00000579888 337 ntBASIC2.9□□□□□ -1.95
SF3B6Q9Y3B4 AL021707.8-201ENST00000609428 183 ntBASIC2.9□□□□□ -1.95
SF3B6Q9Y3B4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SF3B6Q9Y3B4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.9□□□□□ -1.95
SF3B6Q9Y3B4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 MAPK10-266ENST00000641066 6555 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 RNA5SP50-201ENST00000363731 107 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 Y_RNA.203-201ENST00000364106 102 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 RNA5SP496-201ENST00000391240 109 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 RNU4-43P-201ENST00000410628 137 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 CYCSP49-201ENST00000420810 319 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 AC245102.2-201ENST00000448956 180 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 UQCRHP3-201ENST00000451503 251 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 AC011406.1-201ENST00000512440 370 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 AC011604.1-201ENST00000545978 196 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 AC073413.2-201ENST00000604332 360 ntBASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
SF3B6Q9Y3B4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SF3B6Q9Y3B4 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SF3B6Q9Y3B4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SF3B6Q9Y3B4 DYNLT3P1-201ENST00000378574 347 ntBASIC2.88□□□□□ -1.95
SF3B6Q9Y3B4 RNU6-22P-201ENST00000384355 107 ntBASIC2.88□□□□□ -1.95
SF3B6Q9Y3B4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.88□□□□□ -1.95
SF3B6Q9Y3B4 RPL23AP91-201ENST00000569211 455 ntBASIC2.88□□□□□ -1.95
SF3B6Q9Y3B4 MIR3944-201ENST00000581277 108 ntBASIC2.88□□□□□ -1.95
SF3B6Q9Y3B4 MIR3616-201ENST00000584070 92 ntBASIC2.88□□□□□ -1.95
SF3B6Q9Y3B4 MIR6844-201ENST00000637122 62 ntBASIC2.88□□□□□ -1.95
SF3B6Q9Y3B4 AC138915.1-201ENST00000565427 1685 ntBASIC2.88□□□□□ -1.95
SF3B6Q9Y3B4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 AC245060.5-201ENST00000610778 3293 ntBASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 snoU2-30.2-201ENST00000362805 70 ntBASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 SNORD114-6-201ENST00000364393 72 ntBASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 Y_RNA.420-201ENST00000384043 110 ntBASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 SNORA40-201ENST00000388090 126 ntBASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 MTND4LP9-201ENST00000427694 174 ntBASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 AC104332.2-201ENST00000429959 156 ntBASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 AL445687.1-201ENST00000439946 251 ntBASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 RPS27P1-201ENST00000450552 247 ntBASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 RNU6-1146P-201ENST00000516282 102 ntBASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 RNU6-1096P-201ENST00000517089 102 ntBASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 IGKV2-26-201ENST00000518305 343 ntBASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SF3B6Q9Y3B4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 RNU1-96P-201ENST00000364163 162 ntBASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 Y_RNA.393-201ENST00000383936 102 ntBASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 SNORD17-201ENST00000390930 237 ntBASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 RNA5SP171-201ENST00000391071 115 ntBASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 RNA5SP467-201ENST00000391274 118 ntBASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 SNORA79-201ENST00000408376 140 ntBASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 RNU6-588P-201ENST00000410281 105 ntBASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 PRSS3P4-201ENST00000453323 162 ntBASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 RN7SL293P-201ENST00000481765 281 ntBASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.86□□□□□ -1.95
SF3B6Q9Y3B4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms