Protein–RNA interactions for Protein: Q9Y2K2

SIK3, Serine/threonine-protein kinase SIK3, humanhuman

Predictions only

Length 1,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3Q9Y2K2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.7□□□□□ -1.98
SIK3Q9Y2K2 DEFB117-201ENST00000602356 141 ntBASIC2.7□□□□□ -1.98
SIK3Q9Y2K2 Z83818.1-201ENST00000603584 150 ntBASIC2.7□□□□□ -1.98
SIK3Q9Y2K2 MIR1248-201ENST00000629190 106 ntBASIC2.7□□□□□ -1.98
SIK3Q9Y2K2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
SIK3Q9Y2K2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
SIK3Q9Y2K2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.7□□□□□ -1.98
SIK3Q9Y2K2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 SNORD115-30-201ENST00000364117 82 ntBASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 Y_RNA.329-201ENST00000365209 107 ntBASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 Y_RNA.555-201ENST00000384673 110 ntBASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 AL139095.1-201ENST00000404326 391 ntBASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 Y_RNA.793-201ENST00000411222 111 ntBASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 AL137159.1-201ENST00000452808 512 ntBASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 Y_RNA.644-201ENST00000459006 113 ntBASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 Y_RNA.638-201ENST00000459374 113 ntBASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 Y_RNA.674-201ENST00000516362 113 ntBASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 MIR3145-201ENST00000580727 82 ntBASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 AC073349.3-201ENST00000617616 186 ntBASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
SIK3Q9Y2K2 SNORD114-7-201ENST00000362520 77 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 RNU6-662P-201ENST00000384253 104 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 RNU6-1235P-201ENST00000384559 107 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 AL031003.1-201ENST00000404229 172 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 Y_RNA.626-201ENST00000411288 95 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 AC008134.1-201ENST00000420943 193 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 PRELID3BP1-201ENST00000457142 540 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 RNU6-498P-201ENST00000459468 107 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 RNU6-221P-201ENST00000459541 99 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 SNORD116-28-201ENST00000516123 91 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 RNA5SP320-201ENST00000516263 124 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 CBX3P4-201ENST00000538909 354 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 AL137847.3-201ENST00000611521 109 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 AC004792.1-201ENST00000614523 137 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 FTX_2.1-201ENST00000618816 94 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 U6.115-201ENST00000636045 103 ntBASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SIK3Q9Y2K2 AC062016.1-201ENST00000355719 319 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 MIR21-201ENST00000362134 72 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 Y_RNA.361-201ENST00000365515 120 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 MIR518C-201ENST00000384822 101 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 MIR27B-201ENST00000385129 97 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 AC009238.1-201ENST00000442165 424 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 AC009237.6-201ENST00000446969 424 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 AC093259.1-201ENST00000509755 300 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 SNORA31.15-201ENST00000516771 132 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 AP005660.1-201ENST00000522972 293 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 AC009127.3-201ENST00000570531 403 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 AC006023.1-201ENST00000603944 259 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 AC011921.3-201ENST00000605540 361 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 AC005828.6-201ENST00000606610 232 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 Z82195.2-201ENST00000612348 18351 ntBASIC2.67□□□□□ -1.98
SIK3Q9Y2K2 AL159152.1-201ENST00000635019 2587 ntBASIC2.66□□□□□ -1.98
SIK3Q9Y2K2 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SIK3Q9Y2K2 RNU6-1272P-201ENST00000362776 107 ntBASIC2.66□□□□□ -1.98
SIK3Q9Y2K2 RNU6-651P-201ENST00000411040 105 ntBASIC2.66□□□□□ -1.98
SIK3Q9Y2K2 RNA5SP184-201ENST00000411071 108 ntBASIC2.66□□□□□ -1.98
SIK3Q9Y2K2 RNU6-57P-201ENST00000411348 103 ntBASIC2.66□□□□□ -1.98
SIK3Q9Y2K2 AC123900.1-201ENST00000420390 96 ntBASIC2.66□□□□□ -1.98
SIK3Q9Y2K2 UBE2DNL-203ENST00000474922 222 ntBASIC2.66□□□□□ -1.98
SIK3Q9Y2K2 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.66□□□□□ -1.98
SIK3Q9Y2K2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SIK3Q9Y2K2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.66□□□□□ -1.98
SIK3Q9Y2K2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.98
SIK3Q9Y2K2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 RNU6-271P-201ENST00000363858 105 ntBASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 RNU6-743P-201ENST00000364151 106 ntBASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 Y_RNA.332-201ENST00000365271 113 ntBASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 AC063976.3-201ENST00000426849 329 ntBASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 AL357134.1-201ENST00000445848 426 ntBASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 AL109933.2-201ENST00000452651 260 ntBASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 AC018868.1-201ENST00000491307 315 ntBASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 SNORA4.4-201ENST00000515921 135 ntBASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 AC024405.2-202ENST00000532731 184 ntBASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 AC067747.1-201ENST00000608026 250 ntBASIC2.65□□□□□ -1.99
SIK3Q9Y2K2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 RNU6-1020P-201ENST00000363684 107 ntBASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 Y_RNA.270-201ENST00000364693 104 ntBASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 SNORA25B-201ENST00000365507 128 ntBASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 MIR196B-201ENST00000384852 84 ntBASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 RNU2-48P-201ENST00000410694 191 ntBASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 AC010154.1-201ENST00000425857 269 ntBASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 RNU7-120P-201ENST00000459334 63 ntBASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 AC010598.1-201ENST00000510378 103 ntBASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 RNA5SP402-201ENST00000517148 110 ntBASIC2.64□□□□□ -1.99
SIK3Q9Y2K2 RNU6-667P-201ENST00000517186 102 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 179.3 ms