Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 CRYBB2P1-203ENST00000415709 538 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 AC004552.1-201ENST00000419089 348 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 HMGN2P31-201ENST00000432430 273 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 AC107083.1-201ENST00000439643 279 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 RNA5SP246-201ENST00000458909 119 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 AC125388.1-201ENST00000459631 156 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 AL049830.1-201ENST00000468034 425 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 RPS26P3-201ENST00000470205 348 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 AC090543.2-201ENST00000483963 348 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 AC004057.1-201ENST00000485827 348 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 AC090255.1-201ENST00000495779 349 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 RNA5SP519-201ENST00000516480 119 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 TVP23BP1-201ENST00000557500 617 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 MIR376B-201ENST00000614515 100 ntBASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
VPS9D1Q9Y2B5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
VPS9D1Q9Y2B5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
VPS9D1Q9Y2B5 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
VPS9D1Q9Y2B5 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
VPS9D1Q9Y2B5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
VPS9D1Q9Y2B5 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.15□□□□□ -1.74
VPS9D1Q9Y2B5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 RNA5SP479-201ENST00000364858 117 ntBASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 snoU2-30.1-201ENST00000365012 70 ntBASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 POLR2J4-204ENST00000418424 324 ntBASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 AC090844.1-201ENST00000422019 156 ntBASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 RNU7-113P-201ENST00000459273 62 ntBASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 AC093259.1-201ENST00000509755 300 ntBASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 RNU7-128P-201ENST00000517247 62 ntBASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 AC103810.1-201ENST00000579873 453 ntBASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 RNU6-86P-201ENST00000606534 107 ntBASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
VPS9D1Q9Y2B5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 RNU6-315P-201ENST00000362666 107 ntBASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 SNORA70.2-201ENST00000364506 135 ntBASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 RNA5SP513-201ENST00000364648 118 ntBASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 RNA5SP366-201ENST00000365454 123 ntBASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 RNA5SP239-201ENST00000410218 129 ntBASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 RPL29P14-201ENST00000495837 428 ntBASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 AC099522.1-202ENST00000514718 367 ntBASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 RNU6-539P-201ENST00000516665 103 ntBASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 RNU6-856P-201ENST00000516959 98 ntBASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 MIR6076-201ENST00000617521 113 ntBASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
VPS9D1Q9Y2B5 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 SNORA60-201ENST00000362396 134 ntBASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 SNORD68-201ENST00000363214 84 ntBASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 RNU1-132P-201ENST00000364300 164 ntBASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 MIR519C-201ENST00000385053 87 ntBASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 AP000567.1-201ENST00000406413 156 ntBASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 AL161932.1-201ENST00000437408 146 ntBASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 RPS12P2-201ENST00000439728 269 ntBASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 Z82217.1-201ENST00000625157 8149 ntBASIC4.13□□□□□ -1.75
VPS9D1Q9Y2B5 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 SNORA31-201ENST00000362607 130 ntBASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 AC244505.4-201ENST00000434905 287 ntBASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 SSXP5-201ENST00000443473 287 ntBASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 AC109327.1-201ENST00000471666 403 ntBASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 RPL32P34-201ENST00000486380 400 ntBASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 SCARNA3-201ENST00000517097 143 ntBASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 AP002004.2-201ENST00000531656 154 ntBASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 TOMM20P2-201ENST00000540082 421 ntBASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 MIR4762-201ENST00000585261 75 ntBASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 MIR6830-201ENST00000636015 70 ntBASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.12□□□□□ -1.75
VPS9D1Q9Y2B5 MIR383-201ENST00000362257 73 ntBASIC4.11□□□□□ -1.75
VPS9D1Q9Y2B5 SNORA1B-201ENST00000362535 133 ntBASIC4.11□□□□□ -1.75
VPS9D1Q9Y2B5 SNORD115-37-201ENST00000363768 82 ntBASIC4.11□□□□□ -1.75
VPS9D1Q9Y2B5 SNORD74.4-201ENST00000364129 80 ntBASIC4.11□□□□□ -1.75
VPS9D1Q9Y2B5 Y_RNA.336-201ENST00000365307 109 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms