Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC073413.2-201ENST00000604332 360 ntBASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 AC138915.1-201ENST00000565427 1685 ntBASIC3.3□□□□□ -1.88
FOXD3Q9UJU5 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 RNU6-1056P-201ENST00000383996 107 ntBASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 MIR592-201ENST00000384959 97 ntBASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 AL513477.1-202ENST00000417061 214 ntBASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 AL035461.1-201ENST00000421490 332 ntBASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 AC244505.4-201ENST00000434905 287 ntBASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 SSXP5-201ENST00000443473 287 ntBASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 AL357552.1-201ENST00000445254 415 ntBASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 RN7SL293P-201ENST00000481765 281 ntBASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 RNU6-667P-201ENST00000517186 102 ntBASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 Pinc.1-201ENST00000616452 154 ntBASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
FOXD3Q9UJU5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 Y_RNA.91-201ENST00000363042 107 ntBASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 Y_RNA.99-201ENST00000363138 105 ntBASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 RNU6-1325P-201ENST00000364905 105 ntBASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 SNORA48.8-201ENST00000391324 134 ntBASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 CYCSP4-201ENST00000429682 331 ntBASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 NDUFB1P1-201ENST00000435191 180 ntBASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 AL358944.1-201ENST00000528537 144 ntBASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 AC091178.2-201ENST00000584401 117 ntBASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 AL359075.3-201ENST00000613288 217 ntBASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 U6.105-201ENST00000637379 88 ntBASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 AP000553.6-201ENST00000641242 118 ntBASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
FOXD3Q9UJU5 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
FOXD3Q9UJU5 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
FOXD3Q9UJU5 AC018630.2-201ENST00000534866 2403 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 Y_RNA.242-201ENST00000364473 110 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 RNA5SP51-201ENST00000364750 119 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 RNU6-1186P-201ENST00000410429 97 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 AC104332.2-201ENST00000429959 156 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 AC018634.1-201ENST00000437554 401 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 RNU1-131P-201ENST00000458943 161 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 AC006483.1-201ENST00000487308 313 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 AC018868.1-201ENST00000491307 315 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 SNORA70.24-201ENST00000517233 118 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 AL161756.2-201ENST00000604597 246 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 AL449363.1-201ENST00000617815 186 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 MIR7975-201ENST00000619350 68 ntBASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
FOXD3Q9UJU5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 RNA5SP50-201ENST00000363731 107 ntBASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 RNU6-461P-201ENST00000364195 107 ntBASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 MIR515-2-201ENST00000384883 83 ntBASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 MIR515-1-201ENST00000384884 83 ntBASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 CYCSP49-201ENST00000420810 319 ntBASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 HMGN1P7-201ENST00000491722 313 ntBASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 RN7SKP83-201ENST00000516512 178 ntBASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 RNU6-365P-201ENST00000517113 106 ntBASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 RNU7-128P-201ENST00000517247 62 ntBASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 AC008011.1-201ENST00000545989 227 ntBASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 MIR338-201ENST00000636369 67 ntBASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
FOXD3Q9UJU5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 AC092435.3-201ENST00000565538 3654 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 U8.1-201ENST00000362843 134 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 Y_RNA.280-201ENST00000364765 112 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 SNORA25B-201ENST00000365507 128 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 RNU6-1336P-201ENST00000383886 109 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 SNORA9-201ENST00000384215 133 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 MIR491-201ENST00000384877 84 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 Y_RNA.621-201ENST00000411065 96 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 RNU7-107P-201ENST00000459121 61 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 RN7SL636P-201ENST00000497504 294 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 RNU6-341P-201ENST00000516973 96 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 MIR5195-201ENST00000583555 115 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 AL365205.2-201ENST00000594586 68 ntBASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
FOXD3Q9UJU5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.24□□□□□ -1.89
FOXD3Q9UJU5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.24□□□□□ -1.89
FOXD3Q9UJU5 SNORD18B-201ENST00000365659 72 ntBASIC3.24□□□□□ -1.89
FOXD3Q9UJU5 MIR624-201ENST00000385217 97 ntBASIC3.24□□□□□ -1.89
FOXD3Q9UJU5 SNORA26.7-201ENST00000391288 122 ntBASIC3.24□□□□□ -1.89
FOXD3Q9UJU5 AL603914.1-201ENST00000401964 204 ntBASIC3.24□□□□□ -1.89
FOXD3Q9UJU5 AL158823.1-201ENST00000418441 478 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms