Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 MTCO1P5-201ENST00000433573 344 ntBASIC2.35□□□□□ -2.03
NKX1-2Q9UD57 MTND4LP30-201ENST00000454092 297 ntBASIC2.35□□□□□ -2.03
NKX1-2Q9UD57 AC104435.1-201ENST00000483483 166 ntBASIC2.35□□□□□ -2.03
NKX1-2Q9UD57 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.35□□□□□ -2.03
NKX1-2Q9UD57 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
NKX1-2Q9UD57 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.35□□□□□ -2.03
NKX1-2Q9UD57 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
NKX1-2Q9UD57 AL136360.1-201ENST00000503377 1900 ntBASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 RNU4-82P-201ENST00000362443 140 ntBASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 Y_RNA.60-201ENST00000362831 98 ntBASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 RNU4-80P-201ENST00000363200 141 ntBASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 RNU1-91P-201ENST00000364746 163 ntBASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 Y_RNA.476-201ENST00000384347 108 ntBASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 AL357134.1-201ENST00000445848 426 ntBASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 AL513328.1-201ENST00000446460 224 ntBASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 TRBV12-1-201ENST00000479785 344 ntBASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 AC087441.2-201ENST00000529141 262 ntBASIC2.34□□□□□ -2.03
NKX1-2Q9UD57 Y_RNA.54-201ENST00000362766 105 ntBASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 SNORD115-3-201ENST00000363100 82 ntBASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 Y_RNA.136-201ENST00000363444 102 ntBASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 Y_RNA.277-201ENST00000364754 102 ntBASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 SNORA70B-201ENST00000384210 135 ntBASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 SNORA20B-201ENST00000384220 132 ntBASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 AC060773.1-201ENST00000421698 310 ntBASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 MIR4643-201ENST00000577473 78 ntBASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 AC005828.6-201ENST00000606610 232 ntBASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 AC009487.4-201ENST00000624969 3585 ntBASIC2.33□□□□□ -2.04
NKX1-2Q9UD57 SNORA25.1-201ENST00000362326 128 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 Y_RNA.99-201ENST00000363138 105 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 SNORD27-201ENST00000363981 72 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 RNA5SP456-201ENST00000364002 114 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 RNU6-1240P-201ENST00000365155 104 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 RNA5SP184-201ENST00000411071 108 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 AC022018.1-201ENST00000430685 241 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 RNU6-191P-201ENST00000516295 94 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 RNU2-34P-201ENST00000516534 121 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 RNU6-388P-201ENST00000517012 105 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 RNU6-389P-201ENST00000517048 105 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 AC037487.3-201ENST00000606668 112 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.32□□□□□ -2.04
NKX1-2Q9UD57 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 RNU6-1266P-201ENST00000362794 105 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 Y_RNA.124-201ENST00000363339 93 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 SNORA20.1-201ENST00000364790 130 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 Y_RNA.352-201ENST00000365439 102 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 Y_RNA.416-201ENST00000384014 113 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 Y_RNA.489-201ENST00000384410 101 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 Y_RNA.539-201ENST00000384635 107 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 RNA5SP21-201ENST00000410917 96 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 RNA5SP247-201ENST00000411181 105 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 EDDM3CP-201ENST00000415977 425 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 snoU13.26-201ENST00000459452 105 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 AC091959.1-201ENST00000495857 238 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 AC010598.1-201ENST00000510378 103 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 RNU6-1023P-201ENST00000516137 106 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 RNU6-856P-201ENST00000516959 98 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 AC091544.4-201ENST00000555268 342 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 GTF3AP2-201ENST00000557014 266 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 MIR3126-201ENST00000577443 74 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 AC090425.1-201ENST00000610007 140 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 U2.15-201ENST00000611544 191 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 U2.16-201ENST00000613119 191 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 U2.12-201ENST00000613778 191 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 U2.20-201ENST00000613956 192 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 U2.9-201ENST00000615427 191 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 U2.11-201ENST00000616345 191 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 U2.2-201ENST00000616535 191 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 U2.3-201ENST00000617785 191 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 U2.19-201ENST00000618602 191 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 RNU2-1-201ENST00000618664 191 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 U2.6-201ENST00000619225 191 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 U2.5-201ENST00000619465 191 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 U2.10-201ENST00000620268 191 ntBASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.31□□□□□ -2.04
NKX1-2Q9UD57 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
NKX1-2Q9UD57 AL159152.1-201ENST00000635019 2587 ntBASIC2.3□□□□□ -2.04
NKX1-2Q9UD57 Y_RNA.44-201ENST00000362676 108 ntBASIC2.3□□□□□ -2.04
NKX1-2Q9UD57 RNU6-1164P-201ENST00000364428 107 ntBASIC2.3□□□□□ -2.04
NKX1-2Q9UD57 RNU6-740P-201ENST00000364734 105 ntBASIC2.3□□□□□ -2.04
NKX1-2Q9UD57 Y_RNA.361-201ENST00000365515 120 ntBASIC2.3□□□□□ -2.04
NKX1-2Q9UD57 MIR548H3-201ENST00000408771 118 ntBASIC2.3□□□□□ -2.04
NKX1-2Q9UD57 RNA5SP338-201ENST00000410495 85 ntBASIC2.3□□□□□ -2.04
NKX1-2Q9UD57 RNU6-651P-201ENST00000411040 105 ntBASIC2.3□□□□□ -2.04
NKX1-2Q9UD57 SNORA27.4-201ENST00000516650 95 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms