Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AL391516.1-201ENST00000554380 2449 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 RNU4-40P-201ENST00000364351 143 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 RNU6-596P-201ENST00000365395 98 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.97□□□□□ -2.25
CTSFQ9UBX1 RNU6-793P-201ENST00000384233 104 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 RNU6-541P-201ENST00000384709 110 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 RNU6-373P-201ENST00000411247 98 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 AC008134.1-201ENST00000420943 193 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 MTND4P18-201ENST00000447010 465 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 NDUFB4P10-201ENST00000452541 359 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.97□□□□□ -2.25
CTSFQ9UBX1 AC092989.1-201ENST00000481235 277 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.97□□□□□ -2.25
CTSFQ9UBX1 RNU4-49P-201ENST00000516080 140 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 SNORD116-28-201ENST00000516123 91 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 RNU1-142P-201ENST00000516682 145 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 RN7SKP88-201ENST00000516847 250 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 AC027419.1-201ENST00000522976 328 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 AC136932.1-201ENST00000574771 208 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.97□□□□□ -2.25
CTSFQ9UBX1 MIR5695-201ENST00000579717 85 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 7SK.8-201ENST00000612110 250 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 AL359075.3-201ENST00000613288 217 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 7SK.11-201ENST00000615477 250 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 MIR6128-201ENST00000615528 109 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 7SK.13-201ENST00000622040 250 ntBASIC0.97□□□□□ -2.25
CTSFQ9UBX1 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CTSFQ9UBX1 RNU6-874P-201ENST00000362390 105 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 RNU6-623P-201ENST00000363143 105 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 RNU6-137P-201ENST00000363680 108 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 RNA5SP259-201ENST00000365541 109 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 RNU6-281P-201ENST00000384212 103 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.96□□□□□ -2.26
CTSFQ9UBX1 SNORD65B-201ENST00000459126 73 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 AC093303.1-201ENST00000514549 295 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 RNU6-1198P-201ENST00000516904 67 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 RNU6-165P-201ENST00000517170 99 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 AC134698.4-201ENST00000523451 826 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 AL590705.4-201ENST00000532209 134 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 MIR4273-201ENST00000582824 84 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.96□□□□□ -2.26
CTSFQ9UBX1 AC125232.2-201ENST00000592457 143 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 AC103810.9-201ENST00000606688 112 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 BX284668.6-201ENST00000606899 438 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 AC040896.1-201ENST00000613819 479 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 AL357075.2-201ENST00000614906 189 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.96□□□□□ -2.26
CTSFQ9UBX1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CTSFQ9UBX1 ZNF299P-201ENST00000406845 1804 ntBASIC0.96□□□□□ -2.26
CTSFQ9UBX1 Y_RNA.106-201ENST00000363189 100 ntBASIC0.95□□□□□ -2.26
CTSFQ9UBX1 Y_RNA.179-201ENST00000363844 90 ntBASIC0.95□□□□□ -2.26
CTSFQ9UBX1 RNU4-38P-201ENST00000364472 129 ntBASIC0.95□□□□□ -2.26
CTSFQ9UBX1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
CTSFQ9UBX1 SNORA25-201ENST00000384384 134 ntBASIC0.95□□□□□ -2.26
CTSFQ9UBX1 MIR222-201ENST00000384992 110 ntBASIC0.95□□□□□ -2.26
CTSFQ9UBX1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
CTSFQ9UBX1 RNU6-440P-201ENST00000390882 105 ntBASIC0.95□□□□□ -2.26
CTSFQ9UBX1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC0.95□□□□□ -2.26
CTSFQ9UBX1 SNORD5.1-201ENST00000458800 75 ntBASIC0.95□□□□□ -2.26
CTSFQ9UBX1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
CTSFQ9UBX1 RNU6-718P-201ENST00000516166 105 ntBASIC0.95□□□□□ -2.26
CTSFQ9UBX1 AC023157.2-201ENST00000540596 141 ntBASIC0.95□□□□□ -2.26
CTSFQ9UBX1 MIR3664-201ENST00000579074 99 ntBASIC0.95□□□□□ -2.26
CTSFQ9UBX1 AC005014.2-201ENST00000607795 599 ntBASIC0.95□□□□□ -2.26
CTSFQ9UBX1 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
CTSFQ9UBX1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
CTSFQ9UBX1 RNU6-1123P-201ENST00000362347 106 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CTSFQ9UBX1 RNU6-1001P-201ENST00000411265 100 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.94□□□□□ -2.26
CTSFQ9UBX1 AC245047.3-201ENST00000429428 127 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 HSPE1P13-201ENST00000451143 297 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 U8.22-201ENST00000459141 133 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 AC092991.1-201ENST00000477176 376 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 AC069439.1-201ENST00000494739 167 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 MTND5P5-201ENST00000503764 376 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.94□□□□□ -2.26
CTSFQ9UBX1 RNU7-175P-201ENST00000515915 61 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 Y_RNA.682-201ENST00000516457 100 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 CYCSP23-201ENST00000519781 313 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 MIR5701-3-201ENST00000578890 82 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 MIR5701-1-201ENST00000585138 82 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 AC022432.1-201ENST00000595739 310 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 AL022345.2-201ENST00000606307 135 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 AC010999.1-201ENST00000611856 324 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 MIR5701-2-201ENST00000615634 82 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 AC027335.2-201ENST00000624030 375 ntBASIC0.94□□□□□ -2.26
CTSFQ9UBX1 Y_RNA.157-201ENST00000363638 102 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 RNU6-280P-201ENST00000364145 104 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 Y_RNA.453-201ENST00000384223 109 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 MIR520E-201ENST00000384867 87 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 RNU1-139P-201ENST00000391307 165 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
CTSFQ9UBX1 MRPL42P3-201ENST00000401492 326 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 AL355796.1-201ENST00000406706 323 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 RNU6-329P-201ENST00000459618 107 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.93□□□□□ -2.26
CTSFQ9UBX1 AC011352.1-201ENST00000512300 793 ntBASIC0.93□□□□□ -2.26
CTSFQ9UBX1 AC026782.1-201ENST00000512952 449 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms