Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC59Q9P031 AC018710.1-201ENST00000506509 158 ntBASIC0.72□□□□□ -2.29
CCDC59Q9P031 RNU6-197P-201ENST00000516680 100 ntBASIC0.72□□□□□ -2.29
CCDC59Q9P031 RNU7-28P-201ENST00000516759 62 ntBASIC0.72□□□□□ -2.29
CCDC59Q9P031 RNU6-341P-201ENST00000516973 96 ntBASIC0.72□□□□□ -2.29
CCDC59Q9P031 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC59Q9P031 AP002001.1-203ENST00000534002 267 ntBASIC0.72□□□□□ -2.29
CCDC59Q9P031 AC068790.6-201ENST00000602558 258 ntBASIC0.72□□□□□ -2.29
CCDC59Q9P031 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC59Q9P031 SNORA1B-201ENST00000362535 133 ntBASIC0.71□□□□□ -2.3
CCDC59Q9P031 Y_RNA.51-201ENST00000362725 102 ntBASIC0.71□□□□□ -2.3
CCDC59Q9P031 RNU6-281P-201ENST00000384212 103 ntBASIC0.71□□□□□ -2.3
CCDC59Q9P031 MIR562-201ENST00000384894 95 ntBASIC0.71□□□□□ -2.3
CCDC59Q9P031 MIR942-201ENST00000401111 86 ntBASIC0.71□□□□□ -2.3
CCDC59Q9P031 AC090142.3-201ENST00000519012 385 ntBASIC0.71□□□□□ -2.3
CCDC59Q9P031 AC091178.2-201ENST00000584401 117 ntBASIC0.71□□□□□ -2.3
CCDC59Q9P031 AL117336.2-201ENST00000602435 335 ntBASIC0.71□□□□□ -2.3
CCDC59Q9P031 RNU6-222P-201ENST00000362438 107 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 RNU6-407P-201ENST00000365280 104 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC59Q9P031 SNORD116-1-201ENST00000384335 95 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 RNU1-139P-201ENST00000391307 165 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 RNU2-16P-201ENST00000410712 136 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 RNU2-64P-201ENST00000411315 191 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 USMG5P1-201ENST00000425964 177 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 USP9YP16-201ENST00000430287 407 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 USP9YP23-201ENST00000455085 407 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 AC046134.1-201ENST00000514454 666 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 RNA5SP20-201ENST00000515976 84 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 RNU6-1114P-201ENST00000516022 107 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 AP002004.2-201ENST00000531656 154 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 AC093023.1-201ENST00000547375 507 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 MIR3942-201ENST00000585264 109 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 MIR1321-201ENST00000637766 79 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 ZNF299P-201ENST00000406845 1804 ntBASIC0.7□□□□□ -2.3
CCDC59Q9P031 RNU6-595P-201ENST00000363944 107 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 RNU6-596P-201ENST00000365395 98 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 RNU6-376P-201ENST00000384731 106 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 MIR608-201ENST00000384820 100 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 MIR532-201ENST00000385025 91 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 RNA5SP482-201ENST00000391269 118 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 RPS3AP1-201ENST00000413190 320 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 AP1B1P2-201ENST00000416196 106 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 AC018865.2-201ENST00000423631 129 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 AL121890.1-201ENST00000435457 205 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 MTND1P1-201ENST00000445453 368 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 MTCO2P7-201ENST00000446518 666 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 RNU6-1291P-201ENST00000516591 104 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.69□□□□□ -2.3
CCDC59Q9P031 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
CCDC59Q9P031 MIRLET7C-201ENST00000362160 84 ntBASIC0.68□□□□□ -2.3
CCDC59Q9P031 SNORA11.2-201ENST00000408318 127 ntBASIC0.68□□□□□ -2.3
CCDC59Q9P031 RNU6-1001P-201ENST00000411265 100 ntBASIC0.68□□□□□ -2.3
CCDC59Q9P031 LINC01399-202ENST00000458450 244 ntBASIC0.68□□□□□ -2.3
CCDC59Q9P031 RNU7-21P-201ENST00000459430 62 ntBASIC0.68□□□□□ -2.3
CCDC59Q9P031 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.68□□□□□ -2.3
CCDC59Q9P031 Y_RNA.706-201ENST00000516933 99 ntBASIC0.68□□□□□ -2.3
CCDC59Q9P031 RNU6-273P-201ENST00000516937 96 ntBASIC0.68□□□□□ -2.3
CCDC59Q9P031 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC59Q9P031 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CCDC59Q9P031 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.68□□□□□ -2.3
CCDC59Q9P031 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.68□□□□□ -2.3
CCDC59Q9P031 AL096861.1-201ENST00000610899 123 ntBASIC0.68□□□□□ -2.3
CCDC59Q9P031 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.68□□□□□ -2.3
CCDC59Q9P031 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CCDC59Q9P031 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CCDC59Q9P031 SNORA27.1-201ENST00000362604 124 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 Y_RNA.106-201ENST00000363189 100 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 RNU6-1059P-201ENST00000363752 98 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.67□□□□□ -2.3
CCDC59Q9P031 RNU6-1264P-201ENST00000383891 107 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 Y_RNA.490-201ENST00000384413 102 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 SNORA75.2-201ENST00000391138 150 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 SNORA75.3-201ENST00000391231 150 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 MTCYBP4-201ENST00000401524 249 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 MIR1261-201ENST00000408659 82 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 Y_RNA.595-201ENST00000410403 105 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.67□□□□□ -2.3
CCDC59Q9P031 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC59Q9P031 AL591806.2-201ENST00000433122 173 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC59Q9P031 UQCRBP2-201ENST00000447827 297 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 RN7SL429P-201ENST00000479090 223 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 RN7SL489P-201ENST00000486185 223 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 RN7SL327P-201ENST00000488659 223 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC59Q9P031 AC136628.3-201ENST00000521868 290 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 CBX3P8-201ENST00000532412 525 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 MIR3684-201ENST00000579779 74 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 PRELID3BP2-201ENST00000605362 201 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 AC100812.1-201ENST00000607622 580 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 AC004832.4-201ENST00000608952 331 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 RN7SL853P-201ENST00000617250 223 ntBASIC0.67□□□□□ -2.3
CCDC59Q9P031 AC024614.3-201ENST00000637860 256 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms