Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 AL627230.6-201ENST00000611129 280 ntBASIC2.51□□□□□ -2.01
DDX56Q9NY93 U6.73-201ENST00000619194 103 ntBASIC2.51□□□□□ -2.01
DDX56Q9NY93 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
DDX56Q9NY93 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
DDX56Q9NY93 Y_RNA.26-201ENST00000362539 101 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 Y_RNA.105-201ENST00000363182 111 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 RNU6-770P-201ENST00000363929 105 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 RNU6-454P-201ENST00000364292 107 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 Y_RNA.243-201ENST00000364481 109 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.5□□□□□ -2.01
DDX56Q9NY93 RPL21P1-201ENST00000399532 476 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 RPL23AP36-201ENST00000413895 458 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.5□□□□□ -2.01
DDX56Q9NY93 AL513328.1-201ENST00000446460 224 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 MRPS10P1-201ENST00000448483 130 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 AC027419.1-201ENST00000522976 328 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX56Q9NY93 AC008269.2-201ENST00000561915 1105 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 MIR4299-201ENST00000577899 72 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 MIR4438-201ENST00000585271 93 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 MIR1291-201ENST00000627649 87 ntBASIC2.5□□□□□ -2.01
DDX56Q9NY93 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.5□□□□□ -2.01
DDX56Q9NY93 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
DDX56Q9NY93 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
DDX56Q9NY93 Y_RNA.101-201ENST00000363154 102 ntBASIC2.49□□□□□ -2.01
DDX56Q9NY93 RNU6-238P-201ENST00000363313 106 ntBASIC2.49□□□□□ -2.01
DDX56Q9NY93 RNU6-1109P-201ENST00000391187 107 ntBASIC2.49□□□□□ -2.01
DDX56Q9NY93 MIR873-201ENST00000401120 77 ntBASIC2.49□□□□□ -2.01
DDX56Q9NY93 RNU6-1186P-201ENST00000410429 97 ntBASIC2.49□□□□□ -2.01
DDX56Q9NY93 AC009310.1-201ENST00000414414 451 ntBASIC2.49□□□□□ -2.01
DDX56Q9NY93 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.49□□□□□ -2.01
DDX56Q9NY93 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.49□□□□□ -2.01
DDX56Q9NY93 RNU7-99P-201ENST00000516271 62 ntBASIC2.49□□□□□ -2.01
DDX56Q9NY93 RNU6-635P-201ENST00000516651 102 ntBASIC2.49□□□□□ -2.01
DDX56Q9NY93 RNU2-12P-201ENST00000517216 168 ntBASIC2.49□□□□□ -2.01
DDX56Q9NY93 AC084364.2-201ENST00000546924 395 ntBASIC2.49□□□□□ -2.01
DDX56Q9NY93 AC005828.6-201ENST00000606610 232 ntBASIC2.49□□□□□ -2.01
DDX56Q9NY93 AL137847.3-201ENST00000611521 109 ntBASIC2.49□□□□□ -2.01
DDX56Q9NY93 Y_RNA.19-201ENST00000362462 99 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 SNORA27.1-201ENST00000362604 124 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 Y_RNA.64-201ENST00000362845 102 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 RNA5SP68-201ENST00000363885 119 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 RNU6-1175P-201ENST00000365200 107 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 SNORA80E-201ENST00000384744 137 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 RNU6-1105P-201ENST00000384774 107 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 RNA5SP467-201ENST00000391274 118 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 MIR548F4-201ENST00000408515 105 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 RNU6-121P-201ENST00000410525 99 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 RNA5SP100-201ENST00000410903 110 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 RNA5SP59-201ENST00000410922 110 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.48□□□□□ -2.01
DDX56Q9NY93 AL356379.1-201ENST00000414105 126 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
DDX56Q9NY93 AC009963.1-201ENST00000417265 157 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 AL358176.2-201ENST00000425769 204 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 LINC01399-202ENST00000458450 244 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 RNU7-94P-201ENST00000459576 63 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 AC098869.1-201ENST00000481627 292 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 MRPS17P9-201ENST00000511924 393 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 RNU6-966P-201ENST00000516479 104 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 RNA5SP481-201ENST00000516814 122 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 AL117187.1-201ENST00000555482 181 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 RPL21P9-201ENST00000556149 474 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.48□□□□□ -2.01
DDX56Q9NY93 AC011373.1-201ENST00000607270 237 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 MIR6817-201ENST00000615588 66 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 MIR376A1-201ENST00000616574 68 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 ZNF658B-202ENST00000615961 3375 ntBASIC2.48□□□□□ -2.01
DDX56Q9NY93 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
DDX56Q9NY93 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
DDX56Q9NY93 RNU6-1309P-201ENST00000363305 108 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 RNU6-112P-201ENST00000363599 104 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 Y_RNA.222-201ENST00000364264 102 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 Y_RNA.276-201ENST00000364732 109 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 RNU6-407P-201ENST00000365280 104 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 SNORD63-201ENST00000384262 68 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 Y_RNA.512-201ENST00000384518 102 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 Y_RNA.570-201ENST00000384750 101 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 AL355796.1-201ENST00000406706 323 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 RNU4-30P-201ENST00000410245 143 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.47□□□□□ -2.01
DDX56Q9NY93 AL121890.1-201ENST00000435457 205 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 DYNLT3P2-201ENST00000442517 295 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 AC005042.3-201ENST00000453230 174 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 RPS29P21-201ENST00000496272 170 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 AC026436.1-201ENST00000510537 270 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 RNA5SP20-201ENST00000515976 84 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 RNU6-155P-201ENST00000516347 100 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.47□□□□□ -2.01
DDX56Q9NY93 MIR4423-201ENST00000580922 80 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 MIR4300-201ENST00000581016 96 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 MIR4713-201ENST00000582691 75 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.47□□□□□ -2.01
DDX56Q9NY93 AC010900.2-201ENST00000604508 210 ntBASIC2.47□□□□□ -2.01
DDX56Q9NY93 AC022441.3-201ENST00000605737 136 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 308.1 ms