Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.57□□□□□ -2
MKS1Q9NXB0 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.57□□□□□ -2
MKS1Q9NXB0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
MKS1Q9NXB0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
MKS1Q9NXB0 SNORA25.1-201ENST00000362326 128 ntBASIC2.56□□□□□ -2
MKS1Q9NXB0 RNU4-80P-201ENST00000363200 141 ntBASIC2.56□□□□□ -2
MKS1Q9NXB0 Y_RNA.287-201ENST00000364853 94 ntBASIC2.56□□□□□ -2
MKS1Q9NXB0 RNU6-407P-201ENST00000365280 104 ntBASIC2.56□□□□□ -2
MKS1Q9NXB0 SNORA9-201ENST00000384215 133 ntBASIC2.56□□□□□ -2
MKS1Q9NXB0 Y_RNA.562-201ENST00000384695 113 ntBASIC2.56□□□□□ -2
MKS1Q9NXB0 AL355497.1-201ENST00000406262 551 ntBASIC2.56□□□□□ -2
MKS1Q9NXB0 MIR1283-2-201ENST00000408621 87 ntBASIC2.56□□□□□ -2
MKS1Q9NXB0 AC024067.1-201ENST00000426199 223 ntBASIC2.56□□□□□ -2
MKS1Q9NXB0 RPL23AP83-201ENST00000434984 473 ntBASIC2.56□□□□□ -2
MKS1Q9NXB0 AL049873.1-201ENST00000480540 376 ntBASIC2.56□□□□□ -2
MKS1Q9NXB0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.56□□□□□ -2
MKS1Q9NXB0 MIR338-201ENST00000636369 67 ntBASIC2.56□□□□□ -2
MKS1Q9NXB0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.56□□□□□ -2
MKS1Q9NXB0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.56□□□□□ -2
MKS1Q9NXB0 CENPCP1-201ENST00000533085 2578 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 RNU6-514P-201ENST00000384208 107 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 RNU6-417P-201ENST00000384712 107 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 AL117342.1-201ENST00000404861 406 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 RNU6-710P-201ENST00000410424 105 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 RPL39P38-201ENST00000467018 153 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 RPS26P55-201ENST00000471178 356 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 RPS27P22-201ENST00000478056 241 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 RNA5SP20-201ENST00000515976 84 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 RNU6-191P-201ENST00000516295 94 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 RNA5SP402-201ENST00000517148 110 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 AL137100.2-201ENST00000555786 315 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 MIR5694-201ENST00000581190 76 ntBASIC2.55□□□□□ -2
MKS1Q9NXB0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.55□□□□□ -2
MKS1Q9NXB0 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
MKS1Q9NXB0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
MKS1Q9NXB0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
MKS1Q9NXB0 Y_RNA.350-201ENST00000365409 98 ntBASIC2.54□□□□□ -2
MKS1Q9NXB0 RNU6-1248P-201ENST00000391096 64 ntBASIC2.54□□□□□ -2
MKS1Q9NXB0 RNU11-3P-201ENST00000391111 133 ntBASIC2.54□□□□□ -2
MKS1Q9NXB0 RNA5SP465-201ENST00000391195 109 ntBASIC2.54□□□□□ -2
MKS1Q9NXB0 Y_RNA.618-201ENST00000410949 107 ntBASIC2.54□□□□□ -2
MKS1Q9NXB0 YWHAEP4-201ENST00000505390 198 ntBASIC2.54□□□□□ -2
MKS1Q9NXB0 RNU7-193P-201ENST00000516723 65 ntBASIC2.54□□□□□ -2
MKS1Q9NXB0 AP005660.1-201ENST00000522972 293 ntBASIC2.54□□□□□ -2
MKS1Q9NXB0 AC079600.2-201ENST00000550076 130 ntBASIC2.54□□□□□ -2
MKS1Q9NXB0 MIR4438-201ENST00000585271 93 ntBASIC2.54□□□□□ -2
MKS1Q9NXB0 AC005786.1-201ENST00000588553 154 ntBASIC2.54□□□□□ -2
MKS1Q9NXB0 AC022513.1-201ENST00000624512 117 ntBASIC2.54□□□□□ -2
MKS1Q9NXB0 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.54□□□□□ -2
MKS1Q9NXB0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.53□□□□□ -2
MKS1Q9NXB0 Y_RNA.307-201ENST00000365022 117 ntBASIC2.53□□□□□ -2
MKS1Q9NXB0 SNORA80E-201ENST00000384744 137 ntBASIC2.53□□□□□ -2
MKS1Q9NXB0 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.53□□□□□ -2
MKS1Q9NXB0 AC087499.2-201ENST00000432861 149 ntBASIC2.53□□□□□ -2
MKS1Q9NXB0 AL135938.1-201ENST00000443141 297 ntBASIC2.53□□□□□ -2
MKS1Q9NXB0 HSPE1P13-201ENST00000451143 297 ntBASIC2.53□□□□□ -2
MKS1Q9NXB0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.53□□□□□ -2
MKS1Q9NXB0 AC091959.1-201ENST00000495857 238 ntBASIC2.53□□□□□ -2
MKS1Q9NXB0 SNORA31.25-201ENST00000517242 134 ntBASIC2.53□□□□□ -2
MKS1Q9NXB0 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.53□□□□□ -2
MKS1Q9NXB0 RPL21P9-201ENST00000556149 474 ntBASIC2.53□□□□□ -2
MKS1Q9NXB0 AL512605.2-201ENST00000592972 256 ntBASIC2.53□□□□□ -2
MKS1Q9NXB0 AL137847.3-201ENST00000611521 109 ntBASIC2.53□□□□□ -2
MKS1Q9NXB0 U6.73-201ENST00000619194 103 ntBASIC2.53□□□□□ -2
MKS1Q9NXB0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MKS1Q9NXB0 RNU6-862P-201ENST00000362804 105 ntBASIC2.52□□□□□ -2.01
MKS1Q9NXB0 RNA5SP456-201ENST00000364002 114 ntBASIC2.52□□□□□ -2.01
MKS1Q9NXB0 MIR597-201ENST00000384968 97 ntBASIC2.52□□□□□ -2.01
MKS1Q9NXB0 MIR483-201ENST00000385070 76 ntBASIC2.52□□□□□ -2.01
MKS1Q9NXB0 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.52□□□□□ -2.01
MKS1Q9NXB0 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.52□□□□□ -2.01
MKS1Q9NXB0 HMGN2P3-201ENST00000433603 273 ntBASIC2.52□□□□□ -2.01
MKS1Q9NXB0 HMGN2P5-201ENST00000436882 273 ntBASIC2.52□□□□□ -2.01
MKS1Q9NXB0 AC078899.2-201ENST00000595282 212 ntBASIC2.52□□□□□ -2.01
MKS1Q9NXB0 AC006006.1-201ENST00000603082 144 ntBASIC2.52□□□□□ -2.01
MKS1Q9NXB0 U2.14-201ENST00000615943 113 ntBASIC2.52□□□□□ -2.01
MKS1Q9NXB0 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
MKS1Q9NXB0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.52□□□□□ -2.01
MKS1Q9NXB0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
MKS1Q9NXB0 RNU1-22P-201ENST00000363334 158 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.352-201ENST00000365439 102 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.447-201ENST00000384184 113 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 MT-TG-201ENST00000387429 68 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 RNA5SP467-201ENST00000391274 118 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 MIR548H3-201ENST00000408771 118 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 CST2P1-201ENST00000425770 87 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.51□□□□□ -2.01
MKS1Q9NXB0 AC099677.2-201ENST00000436385 175 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 MTND1P19-201ENST00000511780 315 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 AC097462.1-201ENST00000514125 324 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 SNORA27.4-201ENST00000516650 95 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 MIR3200-201ENST00000580767 85 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 AC093732.2-201ENST00000607950 274 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.51□□□□□ -2.01
MKS1Q9NXB0 AC012640.5-201ENST00000623897 319 ntBASIC2.51□□□□□ -2.01
MKS1Q9NXB0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
MKS1Q9NXB0 AP006437.1-201ENST00000641440 3685 ntBASIC2.5□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.44-201ENST00000362676 108 ntBASIC2.5□□□□□ -2.01
MKS1Q9NXB0 Y_RNA.188-201ENST00000363952 111 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms